RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 WSCD2Q2TBF2 565 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 RBM48Q5RL73 367 aaKnown RBP7.94□□□□□ -1.14
VAMP3-201ENST00000054666 OR2T5Q6IEZ7 315 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 XKR5Q6UX68 686 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 IKBIPQ70UQ0 350 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 CBLL1Q75N03 491 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 EIF3MQ7L2H7 374 aaKnown RBP7.94□□□□□ -1.14
VAMP3-201ENST00000054666 ARMCX6Q7L4S7 300 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 ZNF551Q7Z340 670 aaPredicted RBP7.94□□□□□ -1.14
VAMP3-201ENST00000054666 PTOV1Q86YD1 416 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 HS3ST5Q8IZT8 346 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 METTL4Q8N3J2 472 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 HDDC3Q8N4P3 179 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 ZNF513Q8N8E2 541 aaPredicted RBP7.94□□□□□ -1.14
VAMP3-201ENST00000054666 OR2T29Q8NH02 315 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 ZFP90Q8TF47 636 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 TBC1D20Q96BZ9 403 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 MTERF3Q96E29 417 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 HSH2DQ96JZ2 352 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 DPH2Q9BQC3 489 aaPredicted RBP7.94□□□□□ -1.14
VAMP3-201ENST00000054666 KXD1Q9BQD3 176 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 ACAT2Q9BWD1 397 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 RSPH9Q9H1X1 276 aaPredicted RBP7.94□□□□□ -1.14
VAMP3-201ENST00000054666 RAD21L1Q9H4I0 556 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 PELI2Q9HAT8 420 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 PHPT1Q9NRX4 125 aaPredicted RBP7.94□□□□□ -1.14
VAMP3-201ENST00000054666 DDX18Q9NVP1 670 aaKnown RBP7.94□□□□□ -1.14
VAMP3-201ENST00000054666 FAM118AQ9NWS6 357 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 KIF17Q9P2E2 1029 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 TAC3Q9UHF0 121 aa7.94□□□□□ -1.14
VAMP3-201ENST00000054666 YBX2Q9Y2T7 364 aaKnown RBP7.94□□□□□ -1.14
VAMP3-201ENST00000054666 CHD7Q9P2D1 2997 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 ANKDD1BA6NHY2 528 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 H3BSA7 217 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 GBAP04062 536 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 FURINP09958 794 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 FPR1P21462 350 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 SERPINB1P30740 379 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 GDI1P31150 447 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 PCGF2P35227 344 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 SOAT1P35610 550 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 CHI3L1P36222 383 aaPredicted RBP7.93□□□□□ -1.14
VAMP3-201ENST00000054666 CRATP43155 626 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 TAS2R50P59544 299 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 C2orf80Q0P641 193 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 KCNAB2Q13303 367 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 RGNQ15493 299 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 ITPRIPL2Q3MIP1 535 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 ZBED5Q49AG3 693 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 BROXQ5VW32 411 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 ZNF776Q68DI1 518 aaPredicted RBP7.93□□□□□ -1.14
VAMP3-201ENST00000054666 SYNPOQ8N3V7 929 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 C2orf73Q8N5S3 287 aaPredicted RBP7.93□□□□□ -1.14
VAMP3-201ENST00000054666 LMNTD1Q8N9Z9 388 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 OR4K1Q8NGD4 311 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 OR10Q1Q8NGQ4 319 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 ADAMTS16Q8TE57 1224 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 GANCQ8TET4 914 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 C16orf78Q8WTQ4 265 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 SMPDL3AQ92484 453 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 NRBF2Q96F24 287 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 TPD52L3Q96J77 140 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 SLC35A5Q9BS91 424 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 GABARAPL1Q9H0R8 117 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 ADNPQ9H2P0 1102 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 OSGEPL1Q9H4B0 414 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 REEP1Q9H902 201 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 LMCD1Q9NZU5 365 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 GMEB1Q9Y692 573 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 NUP214P35658 2090 aaPredicted RBP7.93□□□□□ -1.14
VAMP3-201ENST00000054666 A0A1W2PP55 124 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 hCG_2039718K7EN88 272 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 BCKDKO14874 412 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 YY2O15391 372 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 SUV39H1O43463 412 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 SEMA3DO95025 777 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 C6orf47O95873 294 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 KLK1P06870 262 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 ERGP11308 486 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 CALRP27797 417 aaKnown RBP7.93□□□□□ -1.14
VAMP3-201ENST00000054666 ELK4P28324 431 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 TEAD1P28347 426 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 DNAJA1P31689 397 aaKnown RBP7.93□□□□□ -1.14
VAMP3-201ENST00000054666 SHMT2P34897 504 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 CCR8P51685 355 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 ITGA1P56199 1179 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 PPP1R8Q12972 351 aaKnown RBP7.93□□□□□ -1.14
VAMP3-201ENST00000054666 FADDQ13158 208 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 TOP3AQ13472 1001 aaPredicted RBP7.93□□□□□ -1.14
VAMP3-201ENST00000054666 IL18R1Q13478 541 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 PDE7AQ13946 482 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 IRF4Q15306 451 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 TMEM259Q4ZIN3 620 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 ZNF385BQ569K4 471 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.93□□□□□ -1.14
VAMP3-201ENST00000054666 GCNT6Q5T4J0 391 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 METRNLQ641Q3 311 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 TRIM40Q6P9F5 258 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 ZNF773Q6PK81 442 aa7.93□□□□□ -1.14
VAMP3-201ENST00000054666 PAGE2Q7Z2X7 111 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms