RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Zfp599E9PWP1 548 aa21.8■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Gm4775F7ANJ3 135 aa21.8■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Vmn2r61L7N2B8 865 aa21.8■■□□□ 1.08
Scn1b-201ENSMUST00000098548 EnpepP16406 945 aa21.8■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Ceacam1P31809 521 aa21.8■■□□□ 1.08
Scn1b-201ENSMUST00000098548 CtnsP57757 367 aa21.8■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Gmeb2P58929 530 aa21.8■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Gal3st3P61315 431 aa21.8■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Cep76Q0VEJ0 659 aa21.8■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Olfr381Q5SSP0 311 aa21.8■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Ifi47Q61635 420 aa21.8■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Lix1Q6P566 282 aa21.8■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Nadsyn1Q711T7 725 aa21.8■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Olfr384Q7TRX8 312 aa21.8■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Q8BHB7 409 aa21.8■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Lrfn3Q8BLY3 626 aa21.8■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Casp9Q8C3Q9 454 aa21.8■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Pih1d2Q8CHR9 315 aa21.8■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Dcun1d3Q8K0V2 304 aa21.8■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Zfyve21Q8VCM3 234 aa21.8■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Ankrd49Q8VE42 238 aa21.8■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Nsmce2Q91VT1 247 aa21.8■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Cela1Q91X79 266 aa21.8■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Pdia5Q921X9 517 aa21.8■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Ceacam2Q925P2 520 aa21.8■■□□□ 1.08
Scn1b-201ENSMUST00000098548 5330417H12RikQ9D3P2 110 aa21.8■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Tas2r119Q9JKT2 335 aa21.8■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Vnn3Q9QZ25 500 aa21.8■■□□□ 1.08
Scn1b-201ENSMUST00000098548 VapaQ9WV55 249 aaKnown RBP21.8■■□□□ 1.08
Scn1b-201ENSMUST00000098548 CroccQ8CJ40 2009 aa21.8■■□□□ 1.08
Scn1b-201ENSMUST00000098548 MgaA2AWL7 3003 aaKnown RBP21.8■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Zfp964B2RR88 472 aa21.79■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Ces2hF6Z9B9 558 aa21.79■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Matn4O89029 624 aa21.79■■□□□ 1.08
Scn1b-201ENSMUST00000098548 MdkP12025 140 aa21.79■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Bmp7P23359 430 aa21.79■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Kcnj5P48545 419 aa21.79■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Klrb1Q0ZUP1 214 aa21.79■■□□□ 1.08
Scn1b-201ENSMUST00000098548 CrtamQ149L7 389 aa21.79■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Riiad1Q3KNY5 119 aa21.79■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Pitpnm3Q3UHE1 974 aa21.79■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Gtpbp2Q3UJK4 602 aa21.79■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Gm5460Q3UQ97 254 aa21.79■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Cep295nlQ497N6 533 aa21.79■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Flot2Q60634 428 aaKnown RBP21.79■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Znf32Q80V23 272 aa21.79■■□□□ 1.08
Scn1b-201ENSMUST00000098548 C2cd4bQ80XU5 340 aa21.79■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Rmnd5aQ80YQ8 391 aa21.79■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Snx32Q80ZJ7 404 aa21.79■■□□□ 1.08
Scn1b-201ENSMUST00000098548 4930503B20RikQ80ZP0 234 aa21.79■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Znf385bQ8BXJ8 482 aaKnown RBP21.79■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Lats1Q8BYR2 1129 aa21.79■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Mptx1Q8R1M8 219 aa21.79■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Catsper1Q91ZR5 686 aa21.79■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Edem1Q925U4 652 aa21.79■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Ankrd61Q9CQM6 421 aa21.79■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Tmed5Q9CXE7 229 aa21.79■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Fam162aQ9D6U8 155 aa21.79■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Enpp2Q9R1E6 862 aa21.79■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Atp6v1c1Q9Z1G3 382 aa21.79■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Clic1Q9Z1Q5 241 aaKnown RBP21.79■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Cldn8Q9Z260 225 aa21.79■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Zscan4eA0A1B0GRE8 505 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Gm15821A6X8J8 139 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 ChadlE9Q7T7 748 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Tmco2P0C1V4 183 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Il1rl1P14719 567 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Ruvbl1P60122 456 aaKnown RBP21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Eef1a2P62631 463 aaKnown RBP21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 EpycP70186 322 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 PamP97467 979 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Tmem173Q3TBT3 378 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Usp39Q3TIX9 564 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Hipk4Q3V016 616 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Actr3bQ641P0 418 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Dcaf13Q6PAC3 445 aaKnown RBP21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Csgalnact1Q8BJQ9 530 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Bpifb2Q8C1E1 462 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Shisa7Q8C3Q5 558 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Pias2Q8C5D8 621 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Abhd4Q8VD66 342 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Olfr382Q8VF79 312 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Asf1aQ9CQE6 204 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Wdr55Q9CX97 388 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 EbplQ9D0P0 206 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Katnal2Q9D3R6 539 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Slc25a27Q9D6D0 322 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Tmigd1Q9D7L8 261 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Slc19a2Q9EQN9 498 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Vps29Q9QZ88 182 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Mbd4Q9Z2D7 554 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Olfr1200A2ATJ4 336 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Tceal7A3KGA4 98 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Olfr220E9Q050 325 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 H2-Q1O19441 368 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Agpat1O35083 285 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Phox2bO35690 314 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 Tacr2P30549 384 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 PnmtP40935 295 aa21.78■■□□□ 1.08
Scn1b-201ENSMUST00000098548 FaslgP41047 279 aa21.78■■□□□ 1.08
Retrieved 100 of 22,080 RNA–protein pairs in 44.9 ms