RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Ccbe1Q3MI99 408 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Myl12bQ3THE2 172 aaKnown RBP9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Naf1Q3UMQ8 489 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 H2-Q2Q4KN81 360 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Nxf3Q4ZGD9 553 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Fstl1Q62356 306 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Prrg3Q6PAQ9 231 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Ppp2r1bQ7TNP2 601 aaKnown RBP9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Olfr735Q7TRM4 354 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 ToporsQ80Z37 1033 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Clec9aQ8BRU4 238 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Pcyox1lQ8C7K6 495 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Mapre2Q8R001 326 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Cdt1Q8R4E9 557 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Olfr170Q8VGL6 313 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Idh3bQ91VA7 384 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Snx4Q91YJ2 450 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Mri1Q9CQT1 369 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Q9D4W2 315 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Gtf2e2Q9D902 292 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Iqca1lA6H690 825 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 E030030I06RikJ3QML9 246 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Gm11236J3QMS7 360 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 TspearJ3S6Y1 670 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 P01636 108 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Hoxa9P09631 271 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Ctla2aP12399 137 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Polr2lP62876 67 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 VldlrP98156 873 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 G6pdxQ00612 515 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 MagixQ4KL35 324 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 IpmkQ7TT16 396 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Prap1Q80XD8 149 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Cfap20Q8BTU1 193 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Tmem259Q8CIV2 574 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Neto1Q8R4I7 533 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Camkk1Q8VBY2 505 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 AmotQ8VHG2 1126 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Ift46Q9DB07 301 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Pbld1Q9DCG6 288 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Tmem8aQ9ESN3 769 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 PrepQ9QUR6 710 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Hspb3Q9QZ57 154 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Usp34Q6ZQ93 3582 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Cacna1dQ99246 2179 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Olfr1006A2ALD2 312 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Arhgap40E9Q6X9 672 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Slc27a6E9Q9W4 619 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Gm3476K7N6V0 257 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Gm6401L7N2C0 213 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 PbsnO08976 174 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 H2-Q1O19441 368 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Matn4O89029 624 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 FesP16879 822 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Slc6a11P31650 627 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 CenpcP49452 906 aaKnown RBP9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Ruvbl1P60122 456 aaKnown RBP9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Nr1h4Q60641 488 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Lag3Q61790 521 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 BC061212Q6P8K3 481 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Osgepl1Q6PEB4 414 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Olfr1015Q7TR94 312 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 PdprQ7TSQ8 878 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Steap3Q8CI59 488 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Olfr693Q8VF89 316 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Mat2bQ99LB6 334 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Yaf2Q99LW6 179 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Asf1aQ9CQE6 204 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Snx7Q9CY18 387 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Phf10Q9D8M7 497 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Vmn1r65Q9EPS7 332 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Dgat1Q9Z2A7 498 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Gm17190V9GX38 357 aa9.41□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Gm4869A0A1B0GSG7 984 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Gm8180E9PXN0 145 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 E9Q0B3 247 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Olfr376E9Q4M1 320 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Tsga10ipF7A1F0 157 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Vmn2r10K7N621 847 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Serpine1P22777 402 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 GuloP58710 440 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Rps13P62301 151 aaKnown RBP9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Rps26P62855 115 aaKnown RBP9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Tbx1P70323 479 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Cab39Q06138 341 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Fut7Q11131 389 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Entpd7Q3TCT4 606 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 CamkmtQ3U2J5 323 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Coq8bQ566J8 533 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 DbhQ64237 622 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Ubtd2Q6PGH0 234 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Q8BGK9 164 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Rab39aQ8BHD0 217 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Gm4922Q8C0N0 497 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Gykl1Q8C635 549 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Zc2hc1cQ8CCG1 527 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Polr1eQ8K202 482 aaKnown RBP9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Ahi1Q8K3E5 1047 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 GabrpQ8QZW7 440 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Olfr1278Q8VF39 313 aa9.4□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 55.4 ms