RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 RhbgQ8BUX5 455 aa16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Gm7073E9QAS1 335 aa16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 PurbO35295 324 aaKnown RBP16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Clec3bP43025 202 aa16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 BckdhaP50136 442 aa16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Ifngr2Q63953 332 aa16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Slc22a18Q78KK3 406 aa16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Rhbdf2Q80WQ6 827 aa16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Cers5Q9D6K9 414 aa16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Ccdc54Q9DAL3 329 aa16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Vmn2r22E9Q7S8 853 aa16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Cdh1P09803 884 aa16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Gng2P63213 71 aa16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Slc44a5Q5RJI2 710 aa16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Gpr156Q6PCP7 798 aa16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Ptx4Q6RUU0 478 aa16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Rbms2Q8VC70 383 aaKnown RBP16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Actl6bQ99MR0 426 aa16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Cd44P15379 778 aa16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Stxbp5lQ5DQR4 1185 aa16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 SynaQ5G5D5 617 aa16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Tmem121Q80XA0 318 aa16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Tor1aQ9ER39 333 aa16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Zfp978A2A7I1 335 aa16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Bhlhe40O35185 411 aa16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Fmo3P97501 534 aa16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Nxf3Q4ZGD9 553 aa16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Gpat4Q8K2C8 456 aa16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Il36gQ8R460 164 aa16.14■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Impa1O55023 277 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Mthfd2P18155 350 aaKnown RBP16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Gm648Q3UJ22 213 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Znf583Q3V080 568 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 1810065E05RikQ5NC41 235 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Slc10a7Q5PT53 340 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Aifm2Q8BUE4 373 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Txnl4bQ8BUH1 149 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Clec1aQ8BWY2 269 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Sh3rf3Q8C120 878 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Kcnq4Q9JK97 696 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Bclaf3A2AG58 752 aaKnown RBP16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Olfr1049A2ARZ0 308 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Cd70O55237 195 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Btg1-ps1Q3V0S2 161 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Btg1-ps2Q3V0X0 161 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Inpp5kQ8C5L6 468 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Nprl3Q8VIJ8 569 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Mrc1Q61830 1456 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Lrrc31F6VYM1 502 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Gm20441G3UYJ7 252 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Kcnc2Q14B80 642 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Muc19Q6JHY2 733 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Lrrn3Q8CBC6 707 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Unc5aQ8K1S4 898 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Tmed9Q99KF1 235 aaKnown RBP16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Zdhhc13Q9CWU2 622 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Ap1s2Q9DB50 160 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Fam122aQ9DB52 284 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Sh3pxd2bA2AAY5 908 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Ces2hF6Z9B9 558 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 H2-Q7P14429 334 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 H2-Q9P14431 200 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 ADGRF3Q58Y75 991 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Sec24dQ6NXL1 1032 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Q8BHB7 409 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Smoc1Q8BLY1 463 aaKnown RBP16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Sdr9c7Q8K3P0 313 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Il21Q9ES17 146 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Elf4Q9Z2U4 655 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 1700017D01RikG5E851 209 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Gm21800J3QMJ9 180 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Svs4P18419 113 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Sec31bQ3TZ89 1158 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Clec4a4Q5YIR8 236 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Crhr2Q60748 411 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 EndovQ8C9A2 338 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Olfr63Q8VBW9 316 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Oas3Q8VI93 1138 aaKnown RBP16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Uckl1Q91YL3 548 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Phc2Q9QWH1 850 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Bard1O70445 765 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 TekQ02858 1122 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Txndc17Q9CQM5 123 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Gnpda2Q9CRC9 276 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Jam2Q9JI59 298 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Sec14l5B2RXM5 696 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Ppef1O35655 650 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Olfr1418Q7TQS3 318 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 C1raQ8CG16 707 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Cnppd1Q8K158 407 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Mrpl21Q9D1N9 209 aaKnown RBP16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Tvp23bQ9D8T4 205 aa16.13■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 RoraP51448 523 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Nr0b2Q62227 260 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Slc30a6Q8BJM5 460 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Ptgr2Q8VDQ1 351 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Ces2cQ91WG0 561 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Ttll11A4Q9F4 727 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Adamts6D3Z1A5 1117 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Mmp10O55123 476 aa16.12■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 35.8 ms