RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 SERTM1A2A2V5 107 aa13.33□□□□□ -0.27
PHGDH-233ENST00000642021 PABPN1LA6NDY0 278 aaKnown RBP13.33□□□□□ -0.27
PHGDH-233ENST00000642021 PRAMEF25A6NGN4 478 aa13.33□□□□□ -0.27
PHGDH-233ENST00000642021 SUV39H1O43463 412 aa13.33□□□□□ -0.27
PHGDH-233ENST00000642021 SGTAO43765 313 aa13.33□□□□□ -0.27
PHGDH-233ENST00000642021 KDM1AO60341 852 aa13.33□□□□□ -0.27
PHGDH-233ENST00000642021 LATS1O95835 1130 aa13.33□□□□□ -0.27
PHGDH-233ENST00000642021 OR1E2P47887 323 aa13.33□□□□□ -0.27
PHGDH-233ENST00000642021 CYP4F8P98187 520 aa13.33□□□□□ -0.27
PHGDH-233ENST00000642021 RGNQ15493 299 aa13.33□□□□□ -0.27
PHGDH-233ENST00000642021 HKDC1Q2TB90 917 aa13.33□□□□□ -0.27
PHGDH-233ENST00000642021 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.33□□□□□ -0.27
PHGDH-233ENST00000642021 COLEC12Q5KU26 742 aa13.33□□□□□ -0.27
PHGDH-233ENST00000642021 ZNF852Q6ZMS4 543 aa13.33□□□□□ -0.27
PHGDH-233ENST00000642021 FAM217AQ8IXS0 508 aa13.33□□□□□ -0.27
PHGDH-233ENST00000642021 SLC5A8Q8N695 610 aa13.33□□□□□ -0.27
PHGDH-233ENST00000642021 DACH2Q96NX9 599 aa13.33□□□□□ -0.27
PHGDH-233ENST00000642021 EPYCQ99645 322 aa13.33□□□□□ -0.27
PHGDH-233ENST00000642021 GABARAPL3Q9BY60 117 aa13.33□□□□□ -0.27
PHGDH-233ENST00000642021 BRD9Q9H8M2 597 aa13.33□□□□□ -0.27
PHGDH-233ENST00000642021 QPCTLQ9NXS2 382 aa13.33□□□□□ -0.27
PHGDH-233ENST00000642021 NDUFAF4Q9P032 175 aa13.33□□□□□ -0.27
PHGDH-233ENST00000642021 B4GALT6Q9UBX8 382 aa13.33□□□□□ -0.27
PHGDH-233ENST00000642021 RAPGEFL1Q9UHV5 662 aa13.33□□□□□ -0.27
PHGDH-233ENST00000642021 PSORS1C1Q9UIG5 152 aa13.33□□□□□ -0.27
PHGDH-233ENST00000642021 LYVE1Q9Y5Y7 322 aa13.33□□□□□ -0.27
PHGDH-233ENST00000642021 M0R129 80 aa13.33□□□□□ -0.28
PHGDH-233ENST00000642021 PRRG1O14668 218 aa13.33□□□□□ -0.28
PHGDH-233ENST00000642021 DSCR3O14972 297 aa13.33□□□□□ -0.28
PHGDH-233ENST00000642021 MYO1DO94832 1006 aa13.33□□□□□ -0.28
PHGDH-233ENST00000642021 ABCB1P08183 1280 aaPredicted RBP13.33□□□□□ -0.28
PHGDH-233ENST00000642021 CYP2A7P20853 494 aa13.33□□□□□ -0.28
PHGDH-233ENST00000642021 SPINT3P49223 89 aa13.33□□□□□ -0.28
PHGDH-233ENST00000642021 SEPHS1P49903 392 aa13.33□□□□□ -0.28
PHGDH-233ENST00000642021 PTPN5P54829 565 aa13.33□□□□□ -0.28
PHGDH-233ENST00000642021 ACSM2AQ08AH3 577 aa13.33□□□□□ -0.28
PHGDH-233ENST00000642021 VEPH1Q14D04 833 aa13.33□□□□□ -0.28
PHGDH-233ENST00000642021 CYP27C1Q4G0S4 372 aa13.33□□□□□ -0.28
PHGDH-233ENST00000642021 ACSM2BQ68CK6 577 aa13.33□□□□□ -0.28
PHGDH-233ENST00000642021 THOC6Q86W42 341 aaKnown RBP13.33□□□□□ -0.28
PHGDH-233ENST00000642021 LYSMD2Q8IV50 215 aa13.33□□□□□ -0.28
PHGDH-233ENST00000642021 LILRA3Q8N6C8 439 aaPredicted RBP13.33□□□□□ -0.28
PHGDH-233ENST00000642021 C1orf52Q8N6N3 182 aaKnown RBP13.33□□□□□ -0.28
PHGDH-233ENST00000642021 KIAA1958Q8N8K9 716 aa13.33□□□□□ -0.28
PHGDH-233ENST00000642021 SPPL2AQ8TCT8 520 aa13.33□□□□□ -0.28
PHGDH-233ENST00000642021 MYLIPQ8WY64 445 aa13.33□□□□□ -0.28
PHGDH-233ENST00000642021 HTRA1Q92743 480 aa13.33□□□□□ -0.28
PHGDH-233ENST00000642021 SAMD11Q96NU1 681 aa13.33□□□□□ -0.28
PHGDH-233ENST00000642021 OR4K3Q96R72 315 aa13.33□□□□□ -0.28
PHGDH-233ENST00000642021 MIR1-1HGQ9H1L0 117 aa13.33□□□□□ -0.28
PHGDH-233ENST00000642021 RAD18Q9NS91 495 aa13.33□□□□□ -0.28
PHGDH-233ENST00000642021 PCDHGB3Q9Y5G1 929 aa13.33□□□□□ -0.28
PHGDH-233ENST00000642021 PRRC2BQ5JSZ5 2229 aaKnown RBP13.32□□□□□ -0.28
PHGDH-233ENST00000642021 METTL15A6NJ78 407 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 OR2AG2A6NM03 316 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 SCAMP2O15127 329 aaKnown RBP13.32□□□□□ -0.28
PHGDH-233ENST00000642021 PRMT3O60678 531 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 MRPS14O60783 128 aaKnown RBP13.32□□□□□ -0.28
PHGDH-233ENST00000642021 MPC1LP0DKB6 136 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 DBTP11182 482 aaKnown RBP13.32□□□□□ -0.28
PHGDH-233ENST00000642021 SREBF2Q12772 1141 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 SELENBP1Q13228 472 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 TIGD6Q17RP2 521 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 ZNF404Q494X3 552 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 COX20Q5RI15 118 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 LHX8Q68G74 356 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 FAAH2Q6GMR7 532 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 DPY19L3Q6ZPD9 716 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 USP45Q70EL2 814 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 HS6ST3Q8IZP7 471 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 ELMO1Q92556 727 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 MCCC1Q96RQ3 725 aaPredicted RBP13.32□□□□□ -0.28
PHGDH-233ENST00000642021 NIPSNAP1Q9BPW8 284 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 DOHHQ9BU89 302 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 KLHL25Q9H0H3 589 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 ZDHHC6Q9H6R6 413 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 EPS8L2Q9H6S3 715 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 GPR83Q9NYM4 423 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 FBXO9Q9UK97 447 aaPredicted RBP13.32□□□□□ -0.28
PHGDH-233ENST00000642021 EXO1Q9UQ84 846 aaKnown RBP13.32□□□□□ -0.28
PHGDH-233ENST00000642021 RUVBL1Q9Y265 456 aaKnown RBP13.32□□□□□ -0.28
PHGDH-233ENST00000642021 PPIL1Q9Y3C6 166 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 FAM32AQ9Y421 112 aaKnown RBP13.32□□□□□ -0.28
PHGDH-233ENST00000642021 PDE4DIPQ5VU43 2346 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 ZNF106Q9H2Y7 1883 aaKnown RBP13.32□□□□□ -0.28
PHGDH-233ENST00000642021 MICAL3Q7RTP6 2002 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 CASP8AP2Q9UKL3 1982 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 PLXNB3Q9ULL4 1909 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 HTR3EA5X5Y0 456 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 ARHGEF33A8MVX0 844 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 TBX1O43435 398 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 OLFM2O95897 454 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 HLA-EP13747 358 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 MAGP20916 626 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 IDSP22304 550 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 HOXD12P35452 270 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 TM4SF4P48230 202 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 CSTF3Q12996 717 aaKnown RBP13.32□□□□□ -0.28
PHGDH-233ENST00000642021 NAE1Q13564 534 aa13.32□□□□□ -0.28
PHGDH-233ENST00000642021 CPTPQ5TA50 214 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms