RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 DTNBP1Q96EV8 351 aa15.78■□□□□ 0.12
PHGDH-216ENST00000641375 PRAP1Q96NZ9 151 aa15.78■□□□□ 0.12
PHGDH-216ENST00000641375 XKR8Q9H6D3 395 aa15.78■□□□□ 0.12
PHGDH-216ENST00000641375 SERHLQ9NQF3 203 aa15.78■□□□□ 0.12
PHGDH-216ENST00000641375 FBXL21Q9UKT6 434 aa15.78■□□□□ 0.12
PHGDH-216ENST00000641375 AP4S1Q9Y587 144 aa15.78■□□□□ 0.12
PHGDH-216ENST00000641375 FANCMQ8IYD8 2048 aa15.78■□□□□ 0.12
PHGDH-216ENST00000641375 PRSS51A0A1B0GVH4 220 aa15.77■□□□□ 0.12
PHGDH-216ENST00000641375 ARPC2O15144 300 aa15.77■□□□□ 0.12
PHGDH-216ENST00000641375 DFNA5O60443 496 aa15.77■□□□□ 0.12
PHGDH-216ENST00000641375 TNFP01375 233 aa15.77■□□□□ 0.12
PHGDH-216ENST00000641375 SLC7A1P30825 629 aa15.77■□□□□ 0.12
PHGDH-216ENST00000641375 SHMT2P34897 504 aa15.77■□□□□ 0.12
PHGDH-216ENST00000641375 ABATP80404 500 aa15.77■□□□□ 0.12
PHGDH-216ENST00000641375 ILF3Q12906 894 aaKnown RBP eCLIP15.77■□□□□ 0.12
PHGDH-216ENST00000641375 FZD5Q13467 585 aa15.77■□□□□ 0.12
PHGDH-216ENST00000641375 GAS6Q14393 721 aa15.77■□□□□ 0.12
PHGDH-216ENST00000641375 TAF11Q15544 211 aa15.77■□□□□ 0.12
PHGDH-216ENST00000641375 RUNDC3AQ59EK9 446 aa15.77■□□□□ 0.12
PHGDH-216ENST00000641375 Q7L0L9 218 aa15.77■□□□□ 0.12
PHGDH-216ENST00000641375 CAMKMTQ7Z624 323 aa15.77■□□□□ 0.12
PHGDH-216ENST00000641375 PROSER1Q86XN7 944 aa15.77■□□□□ 0.12
PHGDH-216ENST00000641375 TNIP2Q8NFZ5 429 aa15.77■□□□□ 0.12
PHGDH-216ENST00000641375 OR13H1Q8NG92 308 aa15.77■□□□□ 0.12
PHGDH-216ENST00000641375 CDC26Q8NHZ8 85 aa15.77■□□□□ 0.12
PHGDH-216ENST00000641375 NELL1Q92832 810 aa15.77■□□□□ 0.12
PHGDH-216ENST00000641375 GBP5Q96PP8 586 aa15.77■□□□□ 0.12
PHGDH-216ENST00000641375 THUMPD3Q9BV44 507 aaKnown RBP15.77■□□□□ 0.12
PHGDH-216ENST00000641375 REXO4Q9GZR2 422 aaKnown RBP15.77■□□□□ 0.12
PHGDH-216ENST00000641375 PAIP1Q9H074 479 aaKnown RBP15.77■□□□□ 0.12
PHGDH-216ENST00000641375 OR6C2Q9NZP2 312 aa15.77■□□□□ 0.12
PHGDH-216ENST00000641375 GMPR2Q9P2T1 348 aaKnown RBP15.77■□□□□ 0.12
PHGDH-216ENST00000641375 NEUROG3Q9Y4Z2 214 aa15.77■□□□□ 0.12
PHGDH-216ENST00000641375 PCDHB3Q9Y5E6 796 aa15.77■□□□□ 0.12
PHGDH-216ENST00000641375 TRBV5-3A0A0A0MS03 114 aa15.77■□□□□ 0.11
PHGDH-216ENST00000641375 FAM170BA6NMN3 283 aa15.77■□□□□ 0.11
PHGDH-216ENST00000641375 RFXANKO14593 260 aa15.77■□□□□ 0.11
PHGDH-216ENST00000641375 SEMA3DO95025 777 aa15.77■□□□□ 0.11
PHGDH-216ENST00000641375 CCNDBP1O95273 360 aa15.77■□□□□ 0.11
PHGDH-216ENST00000641375 F3P13726 295 aa15.77■□□□□ 0.11
PHGDH-216ENST00000641375 ATP6V1B2P21281 511 aa15.77■□□□□ 0.11
PHGDH-216ENST00000641375 RPL3P39023 403 aaKnown RBP15.77■□□□□ 0.11
PHGDH-216ENST00000641375 TRPC1P48995 793 aa15.77■□□□□ 0.11
PHGDH-216ENST00000641375 CYP4F3Q08477 520 aa15.77■□□□□ 0.11
PHGDH-216ENST00000641375 SF1Q15637 639 aaKnown RBP15.77■□□□□ 0.11
PHGDH-216ENST00000641375 OR4F3Q6IEY1 312 aa15.77■□□□□ 0.11
PHGDH-216ENST00000641375 ARMCX6Q7L4S7 300 aa15.77■□□□□ 0.11
PHGDH-216ENST00000641375 VN1R5Q7Z5H4 357 aa15.77■□□□□ 0.11
PHGDH-216ENST00000641375 TRIM73Q86UV7 250 aa15.77■□□□□ 0.11
PHGDH-216ENST00000641375 VPS37AQ8NEZ2 397 aa15.77■□□□□ 0.11
PHGDH-216ENST00000641375 TTLQ8NG68 377 aa15.77■□□□□ 0.11
PHGDH-216ENST00000641375 OR7A2PQ8NGA2 310 aa15.77■□□□□ 0.11
PHGDH-216ENST00000641375 ZNF184Q99676 751 aaPredicted RBP15.77■□□□□ 0.11
PHGDH-216ENST00000641375 MRPS30Q9NP92 439 aaKnown RBP15.77■□□□□ 0.11
PHGDH-216ENST00000641375 C2orf42Q9NWW7 574 aa15.77■□□□□ 0.11
PHGDH-216ENST00000641375 SLC25A37Q9NYZ2 338 aa15.77■□□□□ 0.11
PHGDH-216ENST00000641375 PNMA8BQ9ULN7 279 aaPredicted RBP15.77■□□□□ 0.11
PHGDH-216ENST00000641375 PCDHB14Q9Y5E9 798 aa15.77■□□□□ 0.11
PHGDH-216ENST00000641375 A0A1W2PPC4 97 aa15.76■□□□□ 0.11
PHGDH-216ENST00000641375 KRBA1A5PL33 1030 aa15.76■□□□□ 0.11
PHGDH-216ENST00000641375 DPPA5A6NC42 116 aa15.76■□□□□ 0.11
PHGDH-216ENST00000641375 GRK3P35626 688 aa15.76■□□□□ 0.11
PHGDH-216ENST00000641375 LRRC74AQ0VAA2 488 aa15.76■□□□□ 0.11
PHGDH-216ENST00000641375 TRIP10Q15642 601 aa15.76■□□□□ 0.11
PHGDH-216ENST00000641375 HKDC1Q2TB90 917 aa15.76■□□□□ 0.11
PHGDH-216ENST00000641375 CPTPQ5TA50 214 aa15.76■□□□□ 0.11
PHGDH-216ENST00000641375 DNAJC14Q6Y2X3 702 aaPredicted RBP15.76■□□□□ 0.11
PHGDH-216ENST00000641375 SLC22A18ASQ8N1D0 253 aa15.76■□□□□ 0.11
PHGDH-216ENST00000641375 ANKRD53Q8N9V6 530 aa15.76■□□□□ 0.11
PHGDH-216ENST00000641375 CCL4L1Q8NHW4 92 aa15.76■□□□□ 0.11
PHGDH-216ENST00000641375 FAM81AQ8TBF8 368 aa15.76■□□□□ 0.11
PHGDH-216ENST00000641375 MAGEL2Q9UJ55 1249 aa15.76■□□□□ 0.11
PHGDH-216ENST00000641375 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.76■□□□□ 0.11
PHGDH-216ENST00000641375 PRICKLE3O43900 615 aaPredicted RBP15.76■□□□□ 0.11
PHGDH-216ENST00000641375 IMPDH2P12268 514 aa15.76■□□□□ 0.11
PHGDH-216ENST00000641375 HRH2P25021 359 aa15.76■□□□□ 0.11
PHGDH-216ENST00000641375 MAGEA8P43361 318 aa15.76■□□□□ 0.11
PHGDH-216ENST00000641375 CSNK1G2P78368 415 aa15.76■□□□□ 0.11
PHGDH-216ENST00000641375 SELPLGQ14242 412 aa15.76■□□□□ 0.11
PHGDH-216ENST00000641375 DUOXA1Q1HG43 343 aa15.76■□□□□ 0.11
PHGDH-216ENST00000641375 DEPDC1Q5TB30 811 aa15.76■□□□□ 0.11
PHGDH-216ENST00000641375 ANXA8L1Q5VT79 327 aa15.76■□□□□ 0.11
PHGDH-216ENST00000641375 KHDRBS2Q5VWX1 349 aaKnown RBP15.76■□□□□ 0.11
PHGDH-216ENST00000641375 R3HCC1LQ7Z5L2 792 aaKnown RBP15.76■□□□□ 0.11
PHGDH-216ENST00000641375 ADCK2Q7Z695 626 aa15.76■□□□□ 0.11
PHGDH-216ENST00000641375 ANKRD46Q86W74 232 aa15.76■□□□□ 0.11
PHGDH-216ENST00000641375 AMIGO1Q86WK6 493 aa15.76■□□□□ 0.11
PHGDH-216ENST00000641375 SPPL2CQ8IUH8 684 aa15.76■□□□□ 0.11
PHGDH-216ENST00000641375 MSRB3Q8IXL7 192 aa15.76■□□□□ 0.11
PHGDH-216ENST00000641375 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.76■□□□□ 0.11
PHGDH-216ENST00000641375 LCN9Q8WX39 176 aa15.76■□□□□ 0.11
PHGDH-216ENST00000641375 SNX19Q92543 992 aa15.76■□□□□ 0.11
PHGDH-216ENST00000641375 CENPKQ9BS16 269 aa15.76■□□□□ 0.11
PHGDH-216ENST00000641375 DUSP26Q9BV47 211 aa15.76■□□□□ 0.11
PHGDH-216ENST00000641375 MS4A8Q9BY19 250 aa15.76■□□□□ 0.11
PHGDH-216ENST00000641375 KLHL4Q9C0H6 718 aa15.76■□□□□ 0.11
PHGDH-216ENST00000641375 COPS7BQ9H9Q2 264 aaPredicted RBP15.76■□□□□ 0.11
PHGDH-216ENST00000641375 IGHV1OR15-9A0A0B4J2B8 117 aa15.75■□□□□ 0.11
PHGDH-216ENST00000641375 SPTY2D1-AS1A0A0U1RR47 76 aa15.75■□□□□ 0.11
PHGDH-216ENST00000641375 A6NCN8 305 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms