RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 ATP6V1C2Q8NEY4 427 aa13.29□□□□□ -0.28
SCARB2-227ENST00000640957 FBLIM1Q8WUP2 373 aa13.29□□□□□ -0.28
SCARB2-227ENST00000640957 TMCO6Q96DC7 493 aa13.29□□□□□ -0.28
SCARB2-227ENST00000640957 NUSAP1Q9BXS6 441 aaKnown RBP13.29□□□□□ -0.28
SCARB2-227ENST00000640957 ARHGAP39Q9C0H5 1083 aa13.29□□□□□ -0.28
SCARB2-227ENST00000640957 ZNF224Q9NZL3 707 aa13.29□□□□□ -0.28
SCARB2-227ENST00000640957 UBA2Q9UBT2 640 aaPredicted RBP13.29□□□□□ -0.28
SCARB2-227ENST00000640957 CCDC88CQ9P219 2028 aa13.29□□□□□ -0.28
SCARB2-227ENST00000640957 RLFQ13129 1914 aa13.29□□□□□ -0.28
SCARB2-227ENST00000640957 BTN3A3O00478 584 aa13.29□□□□□ -0.28
SCARB2-227ENST00000640957 FFAR2O15552 330 aa13.29□□□□□ -0.28
SCARB2-227ENST00000640957 PRAMEF12O95522 483 aa13.29□□□□□ -0.28
SCARB2-227ENST00000640957 ELNP15502 786 aa13.29□□□□□ -0.28
SCARB2-227ENST00000640957 KDELR2P33947 212 aa13.29□□□□□ -0.28
SCARB2-227ENST00000640957 SPIBQ01892 262 aa13.29□□□□□ -0.28
SCARB2-227ENST00000640957 KEAP1Q14145 624 aa13.29□□□□□ -0.28
SCARB2-227ENST00000640957 MPPE1Q53F39 396 aa13.29□□□□□ -0.28
SCARB2-227ENST00000640957 INO80DQ53TQ3 878 aaPredicted RBP13.29□□□□□ -0.28
SCARB2-227ENST00000640957 C22orf42Q6IC83 251 aa13.29□□□□□ -0.28
SCARB2-227ENST00000640957 TMEM132CQ8N3T6 1108 aa13.29□□□□□ -0.28
SCARB2-227ENST00000640957 SLC7A5P2Q9GIP4 190 aa13.29□□□□□ -0.28
SCARB2-227ENST00000640957 PPIL3Q9H2H8 161 aaKnown RBP13.29□□□□□ -0.28
SCARB2-227ENST00000640957 SLA2Q9H6Q3 261 aa13.29□□□□□ -0.28
SCARB2-227ENST00000640957 BEX1Q9HBH7 125 aa13.29□□□□□ -0.28
SCARB2-227ENST00000640957 SNX7Q9UNH6 387 aa13.29□□□□□ -0.28
SCARB2-227ENST00000640957 V9GYH0 126 aa13.29□□□□□ -0.28
SCARB2-227ENST00000640957 TNFRSF11BO00300 401 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 GBAP04062 536 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 FCER2P06734 321 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 GLULP15104 373 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 ITGA2P17301 1181 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 MAGEA11P43364 429 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 KRR1Q13601 381 aaKnown RBP13.28□□□□□ -0.28
SCARB2-227ENST00000640957 DGKKQ5KSL6 1271 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 TUBA3EQ6PEY2 450 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 OR10T2Q8NGX3 314 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 LKAAEAR1Q8TD35 194 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 CCDC115Q96NT0 180 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 SERPINB11Q96P15 392 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 ZNF382Q96SR6 550 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 CPPED1Q9BRF8 314 aaPredicted RBP13.28□□□□□ -0.28
SCARB2-227ENST00000640957 CIPCQ9C0C6 399 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 TM9SF3Q9HD45 589 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 ATP13A2Q9NQ11 1180 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 SERHLQ9NQF3 203 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 ZNF226Q9NYT6 803 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 KCNN3Q9UGI6 736 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 PADI3Q9ULW8 664 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 ALG5Q9Y673 324 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 IFRD1O00458 451 aaPredicted RBP13.28□□□□□ -0.28
SCARB2-227ENST00000640957 NCR1O76036 304 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 SRCP12931 536 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 KCNE1P15382 129 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 RAB8AP61006 207 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 RUNX1T1Q06455 604 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 FCHO2Q0JRZ9 810 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 MAP2K5Q13163 448 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 PLET1Q6UQ28 207 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 SELENOMQ8WWX9 145 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 APIPQ96GX9 242 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 HCN4Q9Y3Q4 1203 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 CFAP20Q9Y6A4 193 aaKnown RBP13.28□□□□□ -0.28
SCARB2-227ENST00000640957 LEUTXA8MZ59 168 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 RGS14O43566 566 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 ESR1P03372 595 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 RETP07949 1114 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 CSF3P09919 207 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 RPS14P62263 151 aaKnown RBP13.28□□□□□ -0.28
SCARB2-227ENST00000640957 MRPS6P82932 125 aaKnown RBP13.28□□□□□ -0.28
SCARB2-227ENST00000640957 TWF1Q12792 350 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 QPRTQ15274 297 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 GDF6Q6KF10 455 aaPredicted RBP13.28□□□□□ -0.28
SCARB2-227ENST00000640957 FBXL22Q6P050 247 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 FAM151BQ6UXP7 276 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 AGMOQ6ZNB7 445 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 HMGN2P46Q86SG4 172 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 SCD5Q86SK9 330 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 LSMEM1Q8N8F7 131 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 POF1BQ8WVV4 589 aa13.28□□□□□ -0.28
SCARB2-227ENST00000640957 TRIM45Q9H8W5 580 aaPredicted RBP13.28□□□□□ -0.28
SCARB2-227ENST00000640957 ABT1Q9ULW3 272 aaKnown RBP13.28□□□□□ -0.28
SCARB2-227ENST00000640957 GLTPD2A6NH11 291 aa13.27□□□□□ -0.28
SCARB2-227ENST00000640957 FPGTO14772 594 aa13.27□□□□□ -0.28
SCARB2-227ENST00000640957 PCDH17O14917 1159 aa13.27□□□□□ -0.28
SCARB2-227ENST00000640957 POLR1CO15160 346 aaPredicted RBP13.27□□□□□ -0.28
SCARB2-227ENST00000640957 RAMP2O60895 175 aa13.27□□□□□ -0.28
SCARB2-227ENST00000640957 UGT2B10P36537 528 aa13.27□□□□□ -0.28
SCARB2-227ENST00000640957 SLC9A3P48764 834 aa13.27□□□□□ -0.28
SCARB2-227ENST00000640957 KCNQ1P51787 676 aa13.27□□□□□ -0.28
SCARB2-227ENST00000640957 SCN1BQ07699 218 aa13.27□□□□□ -0.28
SCARB2-227ENST00000640957 SNTA1Q13424 505 aa13.27□□□□□ -0.28
SCARB2-227ENST00000640957 DSC3Q14574 896 aa13.27□□□□□ -0.28
SCARB2-227ENST00000640957 DUSP7Q16829 419 aa13.27□□□□□ -0.28
SCARB2-227ENST00000640957 PTRHD1Q6GMV3 140 aaKnown RBP13.27□□□□□ -0.28
SCARB2-227ENST00000640957 ASB18Q6ZVZ8 466 aa13.27□□□□□ -0.28
SCARB2-227ENST00000640957 PHC2Q8IXK0 858 aa13.27□□□□□ -0.28
SCARB2-227ENST00000640957 BRSK1Q8TDC3 778 aa13.27□□□□□ -0.28
SCARB2-227ENST00000640957 IPCEF1Q8WWN9 437 aaPredicted RBP13.27□□□□□ -0.28
SCARB2-227ENST00000640957 B3GNT4Q9C0J1 378 aa13.27□□□□□ -0.28
SCARB2-227ENST00000640957 RNF121Q9H920 327 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms