RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 SPPL2AQ8TCT8 520 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 ELMO1Q92556 727 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 MS4A4AQ96JQ5 239 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 B3GALT6Q96L58 329 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 CCM2Q9BSQ5 444 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 RACGAP1Q9H0H5 632 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 KCTD5Q9NXV2 234 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 FZD4Q9ULV1 537 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 PRSS21Q9Y6M0 314 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 MAU2Q9Y6X3 613 aa14.3□□□□□ -0.12
CACNA1A-220ENST00000635988 TRBV5-4A0A0C4DH59 114 aa14.29□□□□□ -0.12
CACNA1A-220ENST00000635988 A0A0U1RQS6 177 aa14.29□□□□□ -0.12
CACNA1A-220ENST00000635988 ABCB1P08183 1280 aaPredicted RBP14.29□□□□□ -0.12
CACNA1A-220ENST00000635988 ZDHHC11BP0C7U3 371 aa14.29□□□□□ -0.12
CACNA1A-220ENST00000635988 MAP2K5Q13163 448 aa14.29□□□□□ -0.12
CACNA1A-220ENST00000635988 FRG2Q64ET8 278 aa14.29□□□□□ -0.12
CACNA1A-220ENST00000635988 SERINC5Q86VE9 423 aa14.29□□□□□ -0.12
CACNA1A-220ENST00000635988 C11orf65Q8NCR3 313 aa14.29□□□□□ -0.12
CACNA1A-220ENST00000635988 EID2BQ96D98 161 aa14.29□□□□□ -0.12
CACNA1A-220ENST00000635988 SPATA17Q96L03 361 aa14.29□□□□□ -0.12
CACNA1A-220ENST00000635988 WDFY2Q96P53 400 aa14.29□□□□□ -0.12
CACNA1A-220ENST00000635988 FRG2BQ96QU4 278 aa14.29□□□□□ -0.12
CACNA1A-220ENST00000635988 NDUFAF4Q9P032 175 aa14.29□□□□□ -0.12
CACNA1A-220ENST00000635988 DNMT3LQ9UJW3 386 aa14.29□□□□□ -0.12
CACNA1A-220ENST00000635988 MAPRE3Q9UPY8 281 aa14.29□□□□□ -0.12
CACNA1A-220ENST00000635988 A0A1B0GVM2 712 aa14.29□□□□□ -0.12
CACNA1A-220ENST00000635988 SLC35F4A4IF30 521 aa14.29□□□□□ -0.12
CACNA1A-220ENST00000635988 RGS5O15539 181 aa14.29□□□□□ -0.12
CACNA1A-220ENST00000635988 NBNO60934 754 aa14.29□□□□□ -0.12
CACNA1A-220ENST00000635988 RFX2P48378 723 aa14.29□□□□□ -0.12
CACNA1A-220ENST00000635988 RACK1P63244 317 aaKnown RBP14.29□□□□□ -0.12
CACNA1A-220ENST00000635988 SCN1BQ07699 218 aa14.29□□□□□ -0.12
CACNA1A-220ENST00000635988 PCDH1Q08174 1060 aa14.29□□□□□ -0.12
CACNA1A-220ENST00000635988 ELOAQ14241 798 aaKnown RBP14.29□□□□□ -0.12
CACNA1A-220ENST00000635988 GPR33Q49SQ1 333 aa14.29□□□□□ -0.12
CACNA1A-220ENST00000635988 ARMC12Q5T9G4 340 aa14.29□□□□□ -0.12
CACNA1A-220ENST00000635988 MBOAT1Q6ZNC8 495 aa14.29□□□□□ -0.12
CACNA1A-220ENST00000635988 SLC44A2Q8IWA5 706 aaPredicted RBP14.29□□□□□ -0.12
CACNA1A-220ENST00000635988 TTC9BQ8N6N2 239 aa14.29□□□□□ -0.12
CACNA1A-220ENST00000635988 VPS37AQ8NEZ2 397 aa14.29□□□□□ -0.12
CACNA1A-220ENST00000635988 OR4C15Q8NGM1 316 aa14.29□□□□□ -0.12
CACNA1A-220ENST00000635988 MCCC1Q96RQ3 725 aaPredicted RBP14.29□□□□□ -0.12
CACNA1A-220ENST00000635988 PARK7Q99497 189 aaKnown RBP14.29□□□□□ -0.12
CACNA1A-220ENST00000635988 MAPKAP1Q9BPZ7 522 aa14.29□□□□□ -0.12
CACNA1A-220ENST00000635988 TAPBPLQ9BX59 468 aa14.29□□□□□ -0.12
CACNA1A-220ENST00000635988 SLC22A4Q9H015 551 aa14.29□□□□□ -0.12
CACNA1A-220ENST00000635988 PAQR5Q9NXK6 330 aaPredicted RBP14.29□□□□□ -0.12
CACNA1A-220ENST00000635988 CRLS1Q9UJA2 301 aa14.29□□□□□ -0.12
CACNA1A-220ENST00000635988 KRT87PA6NCN2 255 aa14.28□□□□□ -0.12
CACNA1A-220ENST00000635988 EIF3FO00303 357 aaPredicted RBP14.28□□□□□ -0.12
CACNA1A-220ENST00000635988 C1QCP02747 245 aa14.28□□□□□ -0.12
CACNA1A-220ENST00000635988 HNMTP50135 292 aa14.28□□□□□ -0.12
CACNA1A-220ENST00000635988 RORCP51449 518 aa14.28□□□□□ -0.12
CACNA1A-220ENST00000635988 RUNX1T1Q06455 604 aa14.28□□□□□ -0.12
CACNA1A-220ENST00000635988 CTXN3Q4LDR2 81 aa14.28□□□□□ -0.12
CACNA1A-220ENST00000635988 IFI44LQ53G44 452 aa14.28□□□□□ -0.12
CACNA1A-220ENST00000635988 LRRC66Q68CR7 880 aa14.28□□□□□ -0.12
CACNA1A-220ENST00000635988 GDF6Q6KF10 455 aaPredicted RBP14.28□□□□□ -0.12
CACNA1A-220ENST00000635988 NOXA1Q86UR1 476 aa14.28□□□□□ -0.12
CACNA1A-220ENST00000635988 LGI4Q8N135 537 aa14.28□□□□□ -0.12
CACNA1A-220ENST00000635988 RIPOR3Q96MK2 946 aa14.28□□□□□ -0.12
CACNA1A-220ENST00000635988 NEDD4LQ96PU5 975 aa14.28□□□□□ -0.12
CACNA1A-220ENST00000635988 OR5M11Q96RB7 305 aa14.28□□□□□ -0.12
CACNA1A-220ENST00000635988 ASPNQ9BXN1 380 aa14.28□□□□□ -0.12
CACNA1A-220ENST00000635988 CHST8Q9H2A9 424 aa14.28□□□□□ -0.12
CACNA1A-220ENST00000635988 ZFYVE1Q9HBF4 777 aa14.28□□□□□ -0.12
CACNA1A-220ENST00000635988 CLN6Q9NWW5 311 aa14.28□□□□□ -0.12
CACNA1A-220ENST00000635988 BTNL2Q9UIR0 455 aa14.28□□□□□ -0.12
CACNA1A-220ENST00000635988 ZNF451Q9Y4E5 1061 aa14.28□□□□□ -0.12
CACNA1A-220ENST00000635988 GAPDHSO14556 408 aaPredicted RBP14.28□□□□□ -0.12
CACNA1A-220ENST00000635988 SYN3O14994 580 aa14.28□□□□□ -0.12
CACNA1A-220ENST00000635988 PIPP12273 146 aaPredicted RBP14.28□□□□□ -0.12
CACNA1A-220ENST00000635988 CYP2A7P20853 494 aa14.28□□□□□ -0.12
CACNA1A-220ENST00000635988 ATP5C1P36542 298 aaKnown RBP14.28□□□□□ -0.12
CACNA1A-220ENST00000635988 CRYBA2P53672 197 aa14.28□□□□□ -0.12
CACNA1A-220ENST00000635988 CRISP3P54108 245 aa14.28□□□□□ -0.12
CACNA1A-220ENST00000635988 SPIBQ01892 262 aa14.28□□□□□ -0.12
CACNA1A-220ENST00000635988 RHAGQ02094 409 aa14.28□□□□□ -0.12
CACNA1A-220ENST00000635988 MORN1Q5T089 497 aa14.28□□□□□ -0.12
CACNA1A-220ENST00000635988 PLAG1Q6DJT9 500 aa14.28□□□□□ -0.12
CACNA1A-220ENST00000635988 BRI3BPQ8WY22 251 aa14.28□□□□□ -0.12
CACNA1A-220ENST00000635988 DMRTB1Q96MA1 342 aa14.28□□□□□ -0.12
CACNA1A-220ENST00000635988 GDF15Q99988 308 aa14.28□□□□□ -0.12
CACNA1A-220ENST00000635988 SNX7Q9UNH6 387 aa14.28□□□□□ -0.12
CACNA1A-220ENST00000635988 CFAP20Q9Y6A4 193 aaKnown RBP14.28□□□□□ -0.12
CACNA1A-220ENST00000635988 V9GYH0 126 aa14.28□□□□□ -0.12
CACNA1A-220ENST00000635988 OR6C75A6NL08 312 aa14.27□□□□□ -0.13
CACNA1A-220ENST00000635988 AP3D1O14617 1153 aa14.27□□□□□ -0.13
CACNA1A-220ENST00000635988 GPX5O75715 221 aa14.27□□□□□ -0.13
CACNA1A-220ENST00000635988 PRAMEF12O95522 483 aa14.27□□□□□ -0.13
CACNA1A-220ENST00000635988 HIST1H2AGP0C0S8 130 aaPredicted RBP14.27□□□□□ -0.13
CACNA1A-220ENST00000635988 IL7P13232 177 aa14.27□□□□□ -0.13
CACNA1A-220ENST00000635988 HIST1H2ADP20671 130 aa14.27□□□□□ -0.13
CACNA1A-220ENST00000635988 ARF5P84085 180 aa14.27□□□□□ -0.13
CACNA1A-220ENST00000635988 RGNQ15493 299 aa14.27□□□□□ -0.13
CACNA1A-220ENST00000635988 YIF1BQ5BJH7 314 aa14.27□□□□□ -0.13
CACNA1A-220ENST00000635988 ANXA8L1Q5VT79 327 aa14.27□□□□□ -0.13
CACNA1A-220ENST00000635988 RNF219Q5W0B1 726 aaPredicted RBP14.27□□□□□ -0.13
CACNA1A-220ENST00000635988 CLECL1Q8IZS7 167 aa14.27□□□□□ -0.13
CACNA1A-220ENST00000635988 WDR36Q8NI36 951 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms