RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 F2RL3Q96RI0 385 aa3.61□□□□□ -1.83
CDR1-202ENST00000625883 LPAR4Q99677 370 aa3.61□□□□□ -1.83
CDR1-202ENST00000625883 PRMT1Q99873 361 aaKnown RBP3.61□□□□□ -1.83
CDR1-202ENST00000625883 ZNF559Q9BR84 538 aa3.61□□□□□ -1.83
CDR1-202ENST00000625883 MRPL9Q9BYD2 267 aaKnown RBP3.61□□□□□ -1.83
CDR1-202ENST00000625883 ACPTQ9BZG2 426 aa3.61□□□□□ -1.83
CDR1-202ENST00000625883 SLC39A8Q9C0K1 460 aa3.61□□□□□ -1.83
CDR1-202ENST00000625883 MAN2C1Q9NTJ4 1040 aa3.61□□□□□ -1.83
CDR1-202ENST00000625883 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.61□□□□□ -1.83
CDR1-202ENST00000625883 IL36AQ9UHA7 158 aa3.61□□□□□ -1.83
CDR1-202ENST00000625883 PILRBQ9UKJ0 227 aa3.61□□□□□ -1.83
CDR1-202ENST00000625883 PRDM4Q9UKN5 801 aa3.61□□□□□ -1.83
CDR1-202ENST00000625883 PFASO15067 1338 aa3.61□□□□□ -1.83
CDR1-202ENST00000625883 CNTNAP2Q9UHC6 1331 aa3.61□□□□□ -1.83
CDR1-202ENST00000625883 TRIM64A6NGJ6 449 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 TRIM64BA6NI03 449 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 TEX28O15482 410 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 ATP9AO75110 1047 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 AKAP3O75969 853 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 VTNP04004 478 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 RAF1P04049 648 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 SP1P08047 785 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 SLC2A2P11168 524 aaPredicted RBP3.6□□□□□ -1.83
CDR1-202ENST00000625883 RBMS1P29558 406 aaKnown RBP3.6□□□□□ -1.83
CDR1-202ENST00000625883 CHRNB4P30926 498 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 ACTN3Q08043 901 aaPredicted RBP3.6□□□□□ -1.83
CDR1-202ENST00000625883 SRSF9Q13242 221 aaKnown RBP eCLIP3.6□□□□□ -1.83
CDR1-202ENST00000625883 TEAD2Q15562 447 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 FUT11Q495W5 492 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 ZNF542PQ5EBM4 170 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 PRAMEF8Q5VWM4 474 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 SIGLEC15Q6ZMC9 328 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 KLHDC8BQ8IXV7 354 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 GPC2Q8N158 579 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 NIPA2Q8N8Q9 360 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 GATAD1Q8WUU5 269 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 AP2M1Q96CW1 435 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 EPSTI1Q96J88 318 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 FSD1Q9BTV5 496 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 OSBPL8Q9BZF1 889 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 FAM49AQ9H0Q0 323 aaPredicted RBP3.6□□□□□ -1.83
CDR1-202ENST00000625883 RNPEPL1Q9HAU8 725 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 GPR173Q9NS66 373 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 A0A087X0K7 114 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 TRBV4-1A0A0J9YWV2 114 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 C13orf42A0A1B0GVH6 325 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 SRD5A2P31213 254 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 LEPRP48357 1165 aaKnown RBP3.6□□□□□ -1.83
CDR1-202ENST00000625883 CSNK2BP67870 215 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 UBXN1Q04323 297 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 TRA2AQ13595 282 aaKnown RBP eCLIP3.6□□□□□ -1.83
CDR1-202ENST00000625883 SGCBQ16585 318 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 ZNF876PQ49A33 203 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 AARDQ4LEZ3 155 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 RAPH1Q70E73 1250 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 COX8CQ7Z4L0 72 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 ZC3H3Q8IXZ2 948 aaKnown RBP3.6□□□□□ -1.83
CDR1-202ENST00000625883 FAM89BQ8N5H3 189 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 GPRC5AQ8NFJ5 357 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 FAM76AQ8TAV0 307 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 AZIN2Q96A70 460 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 CDKN2AIPNLQ96HQ2 116 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 NECTIN4Q96NY8 510 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 NEDD4LQ96PU5 975 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 C17orf62Q9BQA9 187 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 PITPNM3Q9BZ71 974 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 MID1IP1Q9NPA3 183 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 PANK4Q9NVE7 773 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 TBC1D13Q9NVG8 400 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 RNF186Q9NXI6 227 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 SPG21Q9NZD8 308 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 SLC12A6Q9UHW9 1150 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 FBXL4Q9UKA2 621 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 ELF5Q9UKW6 265 aaPredicted RBP3.6□□□□□ -1.83
CDR1-202ENST00000625883 PYGO1Q9Y3Y4 419 aa3.6□□□□□ -1.83
CDR1-202ENST00000625883 A0A087WW49 117 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 ZNF195O14628 629 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 PGRMC2O15173 223 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 MLNRO43193 412 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 SCO2O43819 266 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 KIF5CO60282 957 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 CRCPO75575 148 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 RAD51DO75771 328 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 HMBSP08397 361 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 HMOX1P09601 288 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 CFC1BP0CG36 223 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 CFC1P0CG37 223 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 KRT3P12035 628 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 CTNNB1P35222 781 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 OR3A3P47888 321 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 OR3A2P47893 321 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 KIAA1024LP59773 190 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 DCDC1P59894 354 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 FKBP1BP68106 108 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 CETN1Q12798 172 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 TMEM132DQ14C87 1099 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 RPS6KA1Q15418 735 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 PTPN14Q15678 1187 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 C2orf76Q3KRA6 126 aa3.59□□□□□ -1.84
CDR1-202ENST00000625883 C9orf50Q5SZB4 431 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms