RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 MPP7Q5T2T1 576 aa11.28□□□□□ -0.6
CLTC-215ENST00000621829 OR5B17Q8NGF7 314 aa11.28□□□□□ -0.6
CLTC-215ENST00000621829 GPR152Q8TDT2 470 aa11.28□□□□□ -0.6
CLTC-215ENST00000621829 VRK1Q99986 396 aaPredicted RBP11.28□□□□□ -0.6
CLTC-215ENST00000621829 VPS25Q9BRG1 176 aa11.28□□□□□ -0.6
CLTC-215ENST00000621829 CD84Q9UIB8 345 aa11.28□□□□□ -0.6
CLTC-215ENST00000621829 PCDHB1Q9Y5F3 818 aa11.28□□□□□ -0.6
CLTC-215ENST00000621829 ENTPD3O75355 529 aa11.28□□□□□ -0.6
CLTC-215ENST00000621829 SNRNP70P08621 437 aaKnown RBP11.28□□□□□ -0.6
CLTC-215ENST00000621829 PRPS2P11908 318 aa11.28□□□□□ -0.6
CLTC-215ENST00000621829 IL4RP24394 825 aa11.28□□□□□ -0.6
CLTC-215ENST00000621829 RABL3Q5HYI8 236 aa11.28□□□□□ -0.6
CLTC-215ENST00000621829 BEST4Q8NFU0 473 aa11.28□□□□□ -0.6
CLTC-215ENST00000621829 HSH2DQ96JZ2 352 aa11.28□□□□□ -0.6
CLTC-215ENST00000621829 ROBO2Q9HCK4 1378 aa11.28□□□□□ -0.6
CLTC-215ENST00000621829 CSTBP04080 98 aaKnown RBP11.28□□□□□ -0.6
CLTC-215ENST00000621829 CELP19835 753 aa11.28□□□□□ -0.6
CLTC-215ENST00000621829 CHRNA5P30532 468 aa11.28□□□□□ -0.6
CLTC-215ENST00000621829 HERV-K104P61576 105 aa11.28□□□□□ -0.6
CLTC-215ENST00000621829 SNAPC2Q13487 334 aa11.28□□□□□ -0.6
CLTC-215ENST00000621829 Q8N9G6 341 aaPredicted RBP11.28□□□□□ -0.6
CLTC-215ENST00000621829 TMEM68Q96MH6 324 aa11.28□□□□□ -0.6
CLTC-215ENST00000621829 ALPK1Q96QP1 1244 aa11.28□□□□□ -0.6
CLTC-215ENST00000621829 CBY3A6NI87 242 aa11.28□□□□□ -0.6
CLTC-215ENST00000621829 OR1F1O43749 312 aa11.28□□□□□ -0.6
CLTC-215ENST00000621829 NAT1P18440 290 aa11.28□□□□□ -0.6
CLTC-215ENST00000621829 XYLT1Q86Y38 959 aa11.28□□□□□ -0.6
CLTC-215ENST00000621829 COX18Q8N8Q8 333 aa11.28□□□□□ -0.6
CLTC-215ENST00000621829 RDH12Q96NR8 316 aa11.28□□□□□ -0.6
CLTC-215ENST00000621829 NECAB3Q96P71 396 aaPredicted RBP11.28□□□□□ -0.6
CLTC-215ENST00000621829 HIST1H2AAQ96QV6 131 aa11.28□□□□□ -0.6
CLTC-215ENST00000621829 CPXM1Q96SM3 734 aa11.28□□□□□ -0.6
CLTC-215ENST00000621829 NELL2Q99435 816 aa11.28□□□□□ -0.6
CLTC-215ENST00000621829 PSD2Q9BQI7 771 aa11.28□□□□□ -0.6
CLTC-215ENST00000621829 PCTPQ9UKL6 214 aa11.28□□□□□ -0.6
CLTC-215ENST00000621829 ZNRF3Q9ULT6 936 aa11.28□□□□□ -0.6
CLTC-215ENST00000621829 SLC27A6Q9Y2P4 619 aa11.28□□□□□ -0.6
CLTC-215ENST00000621829 GCATO75600 419 aa11.27□□□□□ -0.6
CLTC-215ENST00000621829 IL1BP01584 269 aa11.27□□□□□ -0.6
CLTC-215ENST00000621829 GNRHRP30968 328 aa11.27□□□□□ -0.6
CLTC-215ENST00000621829 SSTR4P31391 388 aa11.27□□□□□ -0.6
CLTC-215ENST00000621829 SERPINF1P36955 418 aa11.27□□□□□ -0.6
CLTC-215ENST00000621829 OR1E2P47887 323 aa11.27□□□□□ -0.6
CLTC-215ENST00000621829 C6orf141Q5SZD1 244 aa11.27□□□□□ -0.6
CLTC-215ENST00000621829 SLC36A4Q6YBV0 504 aa11.27□□□□□ -0.6
CLTC-215ENST00000621829 RPS27LQ71UM5 84 aaKnown RBP11.27□□□□□ -0.6
CLTC-215ENST00000621829 CARM1Q86X55 608 aa11.27□□□□□ -0.6
CLTC-215ENST00000621829 SLC30A8Q8IWU4 369 aa11.27□□□□□ -0.6
CLTC-215ENST00000621829 SDCBP2Q9H190 292 aa11.27□□□□□ -0.6
CLTC-215ENST00000621829 CPNE5Q9HCH3 593 aa11.27□□□□□ -0.6
CLTC-215ENST00000621829 AAASQ9NRG9 546 aa11.27□□□□□ -0.6
CLTC-215ENST00000621829 CDC42BPAQ5VT25 1732 aa11.27□□□□□ -0.6
CLTC-215ENST00000621829 MDFIC2A0A1B0GVS7 189 aa11.27□□□□□ -0.6
CLTC-215ENST00000621829 HSPA12AO43301 675 aa11.27□□□□□ -0.6
CLTC-215ENST00000621829 DLSTP36957 453 aa11.27□□□□□ -0.6
CLTC-215ENST00000621829 PAN3Q58A45 887 aaKnown RBP11.27□□□□□ -0.6
CLTC-215ENST00000621829 SDHAF4Q5VUM1 108 aa11.27□□□□□ -0.6
CLTC-215ENST00000621829 C3P1Q6ZMU1 363 aa11.27□□□□□ -0.6
CLTC-215ENST00000621829 TESCQ96BS2 214 aa11.27□□□□□ -0.6
CLTC-215ENST00000621829 TMEM41AQ96HV5 264 aa11.27□□□□□ -0.6
CLTC-215ENST00000621829 OR14A2Q96R54 314 aa11.27□□□□□ -0.6
CLTC-215ENST00000621829 IFT52Q9Y366 437 aa11.27□□□□□ -0.6
CLTC-215ENST00000621829 GLYATL1P3A0A0U1RQE8 302 aa11.27□□□□□ -0.61
CLTC-215ENST00000621829 PRICKLE3O43900 615 aaPredicted RBP11.27□□□□□ -0.61
CLTC-215ENST00000621829 KCNJ13O60928 360 aa11.27□□□□□ -0.61
CLTC-215ENST00000621829 ARHGEF15O94989 841 aa11.27□□□□□ -0.61
CLTC-215ENST00000621829 ETV1P50549 477 aa11.27□□□□□ -0.61
CLTC-215ENST00000621829 NCBP2P52298 156 aaKnown RBP eCLIP11.27□□□□□ -0.61
CLTC-215ENST00000621829 HMGCS1Q01581 520 aa11.27□□□□□ -0.61
CLTC-215ENST00000621829 ALG10BQ5I7T1 473 aa11.27□□□□□ -0.61
CLTC-215ENST00000621829 ZNF584Q8IVC4 421 aa11.27□□□□□ -0.61
CLTC-215ENST00000621829 OR13J1Q8NGT2 312 aa11.27□□□□□ -0.61
CLTC-215ENST00000621829 NR4A3Q92570 626 aa11.27□□□□□ -0.61
CLTC-215ENST00000621829 PPP1R16AQ96I34 528 aa11.27□□□□□ -0.61
CLTC-215ENST00000621829 PRICKLE1Q96MT3 831 aaPredicted RBP11.27□□□□□ -0.61
CLTC-215ENST00000621829 H3BMQ9 156 aa11.27□□□□□ -0.61
CLTC-215ENST00000621829 CAV3P56539 151 aa11.27□□□□□ -0.61
CLTC-215ENST00000621829 MRPS5P82675 430 aaKnown RBP11.27□□□□□ -0.61
CLTC-215ENST00000621829 SLC35F1Q5T1Q4 408 aa11.27□□□□□ -0.61
CLTC-215ENST00000621829 OR2T35Q8NGX2 323 aa11.27□□□□□ -0.61
CLTC-215ENST00000621829 COG8Q96MW5 612 aa11.27□□□□□ -0.61
CLTC-215ENST00000621829 NR2E3Q9Y5X4 410 aa11.27□□□□□ -0.61
CLTC-215ENST00000621829 OR7A17O14581 309 aa11.27□□□□□ -0.61
CLTC-215ENST00000621829 VILLO15195 856 aa11.27□□□□□ -0.61
CLTC-215ENST00000621829 CTHP32929 405 aa11.27□□□□□ -0.61
CLTC-215ENST00000621829 RBMXP38159 391 aaKnown RBP11.27□□□□□ -0.61
CLTC-215ENST00000621829 PPP1R3AQ16821 1122 aa11.27□□□□□ -0.61
CLTC-215ENST00000621829 FCRL2Q96LA5 508 aaPredicted RBP11.27□□□□□ -0.61
CLTC-215ENST00000621829 SAMD10Q9BYL1 202 aa11.27□□□□□ -0.61
CLTC-215ENST00000621829 OR6C2Q9NZP2 312 aa11.27□□□□□ -0.61
CLTC-215ENST00000621829 H0YAE9 185 aa11.27□□□□□ -0.61
CLTC-215ENST00000621829 MSI1O43347 362 aaKnown RBP11.27□□□□□ -0.61
CLTC-215ENST00000621829 SIX3O95343 332 aaPredicted RBP11.27□□□□□ -0.61
CLTC-215ENST00000621829 GLUD1P00367 558 aa11.27□□□□□ -0.61
CLTC-215ENST00000621829 RIPPLY1Q0D2K3 151 aa11.27□□□□□ -0.61
CLTC-215ENST00000621829 SCGB2A2Q13296 93 aa11.27□□□□□ -0.61
CLTC-215ENST00000621829 KCNAB2Q13303 367 aa11.27□□□□□ -0.61
CLTC-215ENST00000621829 NLRP8Q86W28 1048 aa11.27□□□□□ -0.61
CLTC-215ENST00000621829 ANKRD33BA6NCL7 494 aa11.26□□□□□ -0.61
CLTC-215ENST00000621829 ZNF670-ZNF695F2Z2N8 137 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms