RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 NYAP2Q9P242 653 aa2.17□□□□□ -2.06
TARDBP-220ENST00000618606 POMT2Q9UKY4 750 aa2.17□□□□□ -2.06
TARDBP-220ENST00000618606 ZNF148Q9UQR1 794 aa2.17□□□□□ -2.06
TARDBP-220ENST00000618606 ZNF256Q9Y2P7 627 aaPredicted RBP2.17□□□□□ -2.06
TARDBP-220ENST00000618606 WBP11Q9Y2W2 641 aaKnown RBP2.17□□□□□ -2.06
TARDBP-220ENST00000618606 STYXL1Q9Y6J8 313 aa2.17□□□□□ -2.06
TARDBP-220ENST00000618606 EDDM13A0A1B0GTR0 161 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 A0A1W2PPM1 405 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 TCRBV21S2A2A0A5A6 115 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 NPIPB9F8W1W9 429 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 LRCH4O75427 683 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 TOMM70O94826 608 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 HPP00738 406 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 FYNP06241 537 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 OR2T7P0C7T2 308 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 SUPT20HL2P0C7V6 817 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 DARSP14868 501 aaKnown RBP2.16□□□□□ -2.06
TARDBP-220ENST00000618606 CYP11B2P19099 503 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 AZGP1P25311 298 aaKnown RBP2.16□□□□□ -2.06
TARDBP-220ENST00000618606 OXTRP30559 389 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 CSTF2P33240 577 aaKnown RBP eCLIP2.16□□□□□ -2.06
TARDBP-220ENST00000618606 MNDAP41218 407 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 SOX3P41225 446 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 SLC9A3P48764 834 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 CLCN4P51793 760 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 PRELPP51888 382 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 HNRNPKP61978 463 aaKnown RBP eCLIP2.16□□□□□ -2.06
TARDBP-220ENST00000618606 IRX4P78413 519 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 MZT1Q08AG7 82 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 ZNF415Q09FC8 603 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 AP1B1Q10567 949 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 PKN2Q16513 984 aaKnown RBP2.16□□□□□ -2.06
TARDBP-220ENST00000618606 SNAPC1Q16533 368 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 KRTAP5-7Q6L8G8 165 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 OTOAQ7RTW8 1153 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 HAUS6Q7Z4H7 955 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 CEP57Q86XR8 500 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 ZBED8Q8IZ13 594 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 GUF1Q8N442 669 aaKnown RBP2.16□□□□□ -2.06
TARDBP-220ENST00000618606 KLHDC1Q8N7A1 406 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 SLC4A11Q8NBS3 891 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 MCUQ8NE86 351 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 SETD6Q8TBK2 473 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 KCNE4Q8WWG9 221 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 PTP4A1Q93096 173 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 NXNL1Q96CM4 212 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 CCDC34Q96HJ3 373 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 CCDC114Q96M63 670 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 ZNF558Q96NG5 402 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 RAB3IPQ96QF0 476 aaPredicted RBP2.16□□□□□ -2.06
TARDBP-220ENST00000618606 INTS14Q96SY0 518 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 OLFM1Q99784 485 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 CHCHD5Q9BSY4 110 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 MMADHCQ9H3L0 296 aaPredicted RBP2.16□□□□□ -2.06
TARDBP-220ENST00000618606 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.16□□□□□ -2.06
TARDBP-220ENST00000618606 PSD3Q9NYI0 1048 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 GTSE1Q9NYZ3 720 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 VSIG4Q9Y279 399 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 LIPGQ9Y5X9 500 aa2.16□□□□□ -2.06
TARDBP-220ENST00000618606 ZNF644Q9H582 1327 aaPredicted RBP2.16□□□□□ -2.06
TARDBP-220ENST00000618606 LOC100509620A0A075B734 347 aa2.15□□□□□ -2.07
TARDBP-220ENST00000618606 BICDL2A1A5D9 508 aa2.15□□□□□ -2.07
TARDBP-220ENST00000618606 ANKUB1A6NFN9 424 aa2.15□□□□□ -2.07
TARDBP-220ENST00000618606 TMEM221A6NGB7 291 aa2.15□□□□□ -2.07
TARDBP-220ENST00000618606 RTCAO00442 366 aaKnown RBP2.15□□□□□ -2.07
TARDBP-220ENST00000618606 IPO8O15397 1037 aaKnown RBP2.15□□□□□ -2.07
TARDBP-220ENST00000618606 TEX28O15482 410 aa2.15□□□□□ -2.07
TARDBP-220ENST00000618606 PRAMEF11O60813 436 aa2.15□□□□□ -2.07
TARDBP-220ENST00000618606 KRT33AO76009 404 aa2.15□□□□□ -2.07
TARDBP-220ENST00000618606 HSP90AB1P08238 724 aaKnown RBP2.15□□□□□ -2.07
TARDBP-220ENST00000618606 OR52Z1P0C646 297 aa2.15□□□□□ -2.07
TARDBP-220ENST00000618606 GP1BBP13224 206 aa2.15□□□□□ -2.07
TARDBP-220ENST00000618606 ERCC2P18074 760 aa2.15□□□□□ -2.07
TARDBP-220ENST00000618606 RPL35AP18077 110 aaKnown RBP2.15□□□□□ -2.07
TARDBP-220ENST00000618606 ACHEP22303 614 aa2.15□□□□□ -2.07
TARDBP-220ENST00000618606 ATP6V1E1P36543 226 aa2.15□□□□□ -2.07
TARDBP-220ENST00000618606 MATR3P43243 847 aaKnown RBP eCLIP2.15□□□□□ -2.07
TARDBP-220ENST00000618606 CRKLP46109 303 aaKnown RBP2.15□□□□□ -2.07
TARDBP-220ENST00000618606 KCNJ1P48048 391 aa2.15□□□□□ -2.07
TARDBP-220ENST00000618606 CAPZA1P52907 286 aa2.15□□□□□ -2.07
TARDBP-220ENST00000618606 BPIFB3P59826 476 aa2.15□□□□□ -2.07
TARDBP-220ENST00000618606 LYZP61626 148 aa2.15□□□□□ -2.07
TARDBP-220ENST00000618606 MAT1AQ00266 395 aaKnown RBP2.15□□□□□ -2.07
TARDBP-220ENST00000618606 NDPQ00604 133 aa2.15□□□□□ -2.07
TARDBP-220ENST00000618606 UBXN1Q04323 297 aa2.15□□□□□ -2.07
TARDBP-220ENST00000618606 YWHAHQ04917 246 aaPredicted RBP2.15□□□□□ -2.07
TARDBP-220ENST00000618606 CDH18Q13634 790 aa2.15□□□□□ -2.07
TARDBP-220ENST00000618606 PTK6Q13882 451 aa2.15□□□□□ -2.07
TARDBP-220ENST00000618606 ZNF273Q14593 569 aa2.15□□□□□ -2.07
TARDBP-220ENST00000618606 EXT1Q16394 746 aa2.15□□□□□ -2.07
TARDBP-220ENST00000618606 CA9Q16790 459 aa2.15□□□□□ -2.07
TARDBP-220ENST00000618606 MS4A18Q3C1V0 323 aa2.15□□□□□ -2.07
TARDBP-220ENST00000618606 CBWD6Q4V339 395 aa2.15□□□□□ -2.07
TARDBP-220ENST00000618606 NHSL2Q5HYW2 709 aa2.15□□□□□ -2.07
TARDBP-220ENST00000618606 CBWD3Q5JTY5 395 aa2.15□□□□□ -2.07
TARDBP-220ENST00000618606 IYDQ6PHW0 289 aa2.15□□□□□ -2.07
TARDBP-220ENST00000618606 LCLAT1Q6UWP7 414 aa2.15□□□□□ -2.07
TARDBP-220ENST00000618606 ERN2Q76MJ5 926 aaKnown RBP2.15□□□□□ -2.07
TARDBP-220ENST00000618606 TIPARPQ7Z3E1 657 aaKnown RBP2.15□□□□□ -2.07
TARDBP-220ENST00000618606 OR5T2Q8NGG2 359 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms