RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 NUPL2O15504 423 aaKnown RBP12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 PLOD3O60568 738 aa12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 PRAMEF11O60813 436 aa12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 FPR1P21462 350 aa12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 ITPKAP23677 461 aa12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 CDKN2CP42773 168 aa12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 OR1E2P47887 323 aa12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 NRIP1P48552 1158 aa12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 GRIK2Q13002 908 aa12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 FLYWCH1Q4VC44 716 aa12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 C10orf62Q5T681 223 aaPredicted RBP12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 KDM4DQ6B0I6 523 aa12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 GPR149Q86SP6 731 aa12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 GLRX5Q86SX6 157 aa12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 PHC2Q8IXK0 858 aa12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 SLC34A3Q8N130 599 aa12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 LKAAEAR1Q8TD35 194 aa12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 SELENOMQ8WWX9 145 aa12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 NUSAP1Q9BXS6 441 aaKnown RBP12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 FAM83DQ9H4H8 585 aa12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 TLR8Q9NR97 1041 aaKnown RBP12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 NLKQ9UBE8 527 aa12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 A0A0G2JMZ2 1700 aa12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 LRRC37A2A6NM11 1700 aa12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 PRAMEF1O95521 474 aa12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 ZNF250P15622 560 aa12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 PRKACAP17612 351 aa12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 OGNP20774 298 aaKnown RBP12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 TACR1P25103 407 aa12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 HOXC13P31276 330 aa12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 TTPAP49638 278 aa12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 CXCR4P61073 352 aa12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 CSTF3Q12996 717 aaKnown RBP12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 CDH18Q13634 790 aa12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 SUSD1Q6UWL2 747 aa12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 EIF3MQ7L2H7 374 aaKnown RBP12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 TMEM132CQ8N3T6 1108 aa12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 APH1BQ8WW43 257 aa12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 ASB15Q8WXK1 588 aa12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 HSH2DQ96JZ2 352 aa12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 ATG10Q9H0Y0 220 aa12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 CRLS1Q9UJA2 301 aa12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 SLC6A14Q9UN76 642 aa12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 PCDHGA6Q9Y5G7 932 aa12.96□□□□□ -0.33
PCDHA11-202ENST00000616325 PDCD11Q14690 1871 aaKnown RBP12.96□□□□□ -0.34
PCDHA11-202ENST00000616325 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 CLCA1A8K7I4 914 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 OR7A17O14581 309 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 MTX2O75431 263 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 PRR35P0CG20 571 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 ZNF177Q13360 481 aaPredicted RBP12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 BOP1Q14137 746 aaKnown RBP12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 KEAP1Q14145 624 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 VEPH1Q14D04 833 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 POU4F3Q15319 338 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 TATDN3Q17R31 274 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 TOR2AQ5JU69 321 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 OR4F3Q6IEY1 312 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 CCDC190Q86UF4 302 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 GPR65Q8IYL9 337 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 C19orf18Q8NEA5 215 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 FCGR1BQ92637 280 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 LRTM1Q9HBL6 345 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 OLA1Q9NTK5 396 aaKnown RBP12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 HCN4Q9Y3Q4 1203 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 FAM240BA0A1B0GVZ2 78 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 ANKRD66B4E2M5 251 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 CELF2O95319 508 aaKnown RBP12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 OTCP00480 354 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 RHOAP61586 193 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 SLC14A1Q13336 389 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 PRSS55Q6UWB4 352 aaPredicted RBP12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 SNX20Q7Z614 316 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 CCDC117Q8IWD4 279 aaPredicted RBP12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 TRMT61AQ96FX7 289 aaKnown RBP12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 MRPL9Q9BYD2 267 aaKnown RBP12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 PPIL3Q9H2H8 161 aaKnown RBP12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 NLE1Q9NVX2 485 aaPredicted RBP12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 ARL15Q9NXU5 204 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 RGS17Q9UGC6 210 aaPredicted RBP12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 SLC23A1Q9UHI7 598 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 SAMD4AQ9UPU9 718 aaKnown RBP12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 DLGAP4Q9Y2H0 992 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 PRKAB1Q9Y478 270 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 ARNTLO00327 626 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 RGS14O43566 566 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 TSPAN12O95859 305 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 ERP29P30040 261 aaKnown RBP12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 COL9A2Q14055 689 aaPredicted RBP12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 ZNF284Q2VY69 593 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 ESCO2Q56NI9 601 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 SERPINA9Q86WD7 417 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 CHPFQ8IZ52 775 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 RIPOR3Q96MK2 946 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 ELOVL6Q9H5J4 265 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 RNF121Q9H920 327 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 MCUBQ9NWR8 336 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 GPRC5BQ9NZH0 403 aa12.95□□□□□ -0.34
PCDHA11-202ENST00000616325 NPAP1Q9NZP6 1156 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms