RNA–Protein interactions for RNA: ENST00000613394.4

HPS1-215, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS1, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-215ENST00000613394 LILRA3Q8N6C8 439 aaPredicted RBP13.33□□□□□ -0.28
HPS1-215ENST00000613394 CHST14Q8NCH0 376 aa13.33□□□□□ -0.28
HPS1-215ENST00000613394 CYB5D2Q8WUJ1 264 aa13.33□□□□□ -0.28
HPS1-215ENST00000613394 OTUB1Q96FW1 271 aaPredicted RBP13.33□□□□□ -0.28
HPS1-215ENST00000613394 MAGIXQ9H6Y5 334 aa13.33□□□□□ -0.28
HPS1-215ENST00000613394 NECTIN3Q9NQS3 549 aa13.33□□□□□ -0.28
HPS1-215ENST00000613394 PLXNB2O15031 1838 aa13.33□□□□□ -0.28
HPS1-215ENST00000613394 TAF4O00268 1085 aa13.33□□□□□ -0.28
HPS1-215ENST00000613394 RYKP34925 604 aa13.33□□□□□ -0.28
HPS1-215ENST00000613394 ETV3P41162 512 aa13.33□□□□□ -0.28
HPS1-215ENST00000613394 MAPK8P45983 427 aa13.33□□□□□ -0.28
HPS1-215ENST00000613394 GCNT6Q5T4J0 391 aa13.33□□□□□ -0.28
HPS1-215ENST00000613394 LRRC70Q7Z2Q7 622 aa13.33□□□□□ -0.28
HPS1-215ENST00000613394 PDLIM5Q96HC4 596 aaKnown RBP13.33□□□□□ -0.28
HPS1-215ENST00000613394 CLN6Q9NWW5 311 aa13.33□□□□□ -0.28
HPS1-215ENST00000613394 RNF186Q9NXI6 227 aa13.33□□□□□ -0.28
HPS1-215ENST00000613394 DNAJC27Q9NZQ0 273 aa13.33□□□□□ -0.28
HPS1-215ENST00000613394 HTR3EA5X5Y0 456 aa13.33□□□□□ -0.28
HPS1-215ENST00000613394 PRR23AA6NEV1 266 aa13.33□□□□□ -0.28
HPS1-215ENST00000613394 J3KTA2 159 aa13.33□□□□□ -0.28
HPS1-215ENST00000613394 AREL1O15033 823 aa13.33□□□□□ -0.28
HPS1-215ENST00000613394 ADAMDEC1O15204 470 aa13.33□□□□□ -0.28
HPS1-215ENST00000613394 INPPL1O15357 1258 aa13.33□□□□□ -0.28
HPS1-215ENST00000613394 GADD45GO95257 159 aa13.33□□□□□ -0.28
HPS1-215ENST00000613394 STATHP02808 62 aa13.33□□□□□ -0.28
HPS1-215ENST00000613394 HOXD12P35452 270 aa13.33□□□□□ -0.28
HPS1-215ENST00000613394 PPIGQ13427 754 aaKnown RBP eCLIP13.33□□□□□ -0.282e-6■■■□□ 16.4
HPS1-215ENST00000613394 SCARB2Q14108 478 aa13.33□□□□□ -0.28
HPS1-215ENST00000613394 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.33□□□□□ -0.28
HPS1-215ENST00000613394 RNF130Q86XS8 419 aa13.33□□□□□ -0.28
HPS1-215ENST00000613394 NPAS3Q8IXF0 933 aa13.33□□□□□ -0.28
HPS1-215ENST00000613394 DEPDC4Q8N2C3 294 aa13.33□□□□□ -0.28
HPS1-215ENST00000613394 SPG21Q9NZD8 308 aa13.33□□□□□ -0.28
HPS1-215ENST00000613394 GRXCR2A6NFK2 248 aa13.32□□□□□ -0.28
HPS1-215ENST00000613394 UNCXA6NJT0 531 aa13.32□□□□□ -0.28
HPS1-215ENST00000613394 IDH3BO43837 385 aa13.32□□□□□ -0.28
HPS1-215ENST00000613394 GABARAPO95166 117 aa13.32□□□□□ -0.28
HPS1-215ENST00000613394 KCNK5O95279 499 aa13.32□□□□□ -0.28
HPS1-215ENST00000613394 OXSR1O95747 527 aaPredicted RBP13.32□□□□□ -0.28
HPS1-215ENST00000613394 AMD1P17707 334 aa13.32□□□□□ -0.28
HPS1-215ENST00000613394 RCVRNP35243 200 aa13.32□□□□□ -0.28
HPS1-215ENST00000613394 SLC35A2P78381 396 aa13.32□□□□□ -0.28
HPS1-215ENST00000613394 ALDH6A1Q02252 535 aaKnown RBP13.32□□□□□ -0.28
HPS1-215ENST00000613394 OXA1LQ15070 435 aa13.32□□□□□ -0.28
HPS1-215ENST00000613394 TMEM220Q6QAJ8 160 aa13.32□□□□□ -0.28
HPS1-215ENST00000613394 ELMOD1Q8N336 334 aa13.32□□□□□ -0.28
HPS1-215ENST00000613394 AQP11Q8NBQ7 271 aa13.32□□□□□ -0.28
HPS1-215ENST00000613394 BCL7CQ8WUZ0 217 aaPredicted RBP13.32□□□□□ -0.28
HPS1-215ENST00000613394 RAB8BQ92930 207 aa13.32□□□□□ -0.28
HPS1-215ENST00000613394 PRRG3Q9BZD7 231 aa13.32□□□□□ -0.28
HPS1-215ENST00000613394 KLHL3Q9UH77 587 aa13.32□□□□□ -0.28
HPS1-215ENST00000613394 FBXO10Q9UK96 956 aa13.32□□□□□ -0.28
HPS1-215ENST00000613394 SLC13A4Q9UKG4 626 aa13.32□□□□□ -0.28
HPS1-215ENST00000613394 BRCA1P38398 1863 aaKnown RBP13.32□□□□□ -0.28
HPS1-215ENST00000613394 TSPAN6O43657 245 aa13.32□□□□□ -0.28
HPS1-215ENST00000613394 LZTS3O60299 673 aaPredicted RBP13.32□□□□□ -0.28
HPS1-215ENST00000613394 SNX4O95219 450 aa13.32□□□□□ -0.28
HPS1-215ENST00000613394 PPP5CP53041 499 aa13.32□□□□□ -0.28
HPS1-215ENST00000613394 KCNJ8Q15842 424 aa13.32□□□□□ -0.28
HPS1-215ENST00000613394 UGT8Q16880 541 aa13.32□□□□□ -0.28
HPS1-215ENST00000613394 CCBE1Q6UXH8 406 aaPredicted RBP13.32□□□□□ -0.28
HPS1-215ENST00000613394 RRM2BQ7LG56 351 aa13.32□□□□□ -0.28
HPS1-215ENST00000613394 TRIM46Q7Z4K8 759 aa13.32□□□□□ -0.28
HPS1-215ENST00000613394 ZZZ3Q8IYH5 903 aa13.32□□□□□ -0.28
HPS1-215ENST00000613394 IPCEF1Q8WWN9 437 aaPredicted RBP13.32□□□□□ -0.28
HPS1-215ENST00000613394 MROQ9BYG7 248 aa13.32□□□□□ -0.28
HPS1-215ENST00000613394 SIRT5Q9NXA8 310 aa13.32□□□□□ -0.28
HPS1-215ENST00000613394 IL37Q9NZH6 218 aa13.32□□□□□ -0.28
HPS1-215ENST00000613394 WDR37Q9Y2I8 494 aa13.32□□□□□ -0.28
HPS1-215ENST00000613394 PRKAB1Q9Y478 270 aa13.32□□□□□ -0.28
HPS1-215ENST00000613394 WDR90Q96KV7 1748 aa13.32□□□□□ -0.28
HPS1-215ENST00000613394 KIAA0100Q14667 2235 aaKnown RBP13.32□□□□□ -0.28
HPS1-215ENST00000613394 A6NL46 340 aa13.31□□□□□ -0.28
HPS1-215ENST00000613394 FAM227AF5H4B4 570 aa13.31□□□□□ -0.28
HPS1-215ENST00000613394 KLK1P06870 262 aa13.31□□□□□ -0.28
HPS1-215ENST00000613394 HOXC8P31273 242 aa13.31□□□□□ -0.28
HPS1-215ENST00000613394 POLR2LP62875 67 aaKnown RBP13.31□□□□□ -0.28
HPS1-215ENST00000613394 GSTM4Q03013 218 aa13.31□□□□□ -0.28
HPS1-215ENST00000613394 CCSMST1Q4G0I0 132 aa13.31□□□□□ -0.28
HPS1-215ENST00000613394 TRAF7Q6Q0C0 670 aa13.31□□□□□ -0.28
HPS1-215ENST00000613394 PRSS48Q7RTY5 328 aa13.31□□□□□ -0.28
HPS1-215ENST00000613394 TCAIMQ8N3R3 496 aa13.31□□□□□ -0.28
HPS1-215ENST00000613394 EHD1Q9H4M9 534 aa13.31□□□□□ -0.28
HPS1-215ENST00000613394 RLIMQ9NVW2 624 aa13.31□□□□□ -0.28
HPS1-215ENST00000613394 MALT1Q9UDY8 824 aa13.31□□□□□ -0.28
HPS1-215ENST00000613394 MBD1Q9UIS9 605 aaPredicted RBP13.31□□□□□ -0.28
HPS1-215ENST00000613394 NYNRINQ9P2P1 1898 aaKnown RBP13.31□□□□□ -0.28
HPS1-215ENST00000613394 GABRR3A8MPY1 467 aa13.31□□□□□ -0.28
HPS1-215ENST00000613394 H3BM21 787 aa13.31□□□□□ -0.28
HPS1-215ENST00000613394 SLC16A6O15403 523 aa13.31□□□□□ -0.28
HPS1-215ENST00000613394 SLC16A8O95907 504 aa13.31□□□□□ -0.28
HPS1-215ENST00000613394 F11P03951 625 aa13.31□□□□□ -0.28
HPS1-215ENST00000613394 AOAHP28039 575 aa13.31□□□□□ -0.28
HPS1-215ENST00000613394 MVKQ03426 396 aa13.31□□□□□ -0.28
HPS1-215ENST00000613394 HSPB3Q12988 150 aa13.31□□□□□ -0.28
HPS1-215ENST00000613394 SLBPQ14493 270 aaKnown RBP eCLIP13.31□□□□□ -0.28
HPS1-215ENST00000613394 ANXA8L1Q5VT79 327 aa13.31□□□□□ -0.28
HPS1-215ENST00000613394 TRIM40Q6P9F5 258 aa13.31□□□□□ -0.28
HPS1-215ENST00000613394 USP43Q70EL4 1123 aa13.31□□□□□ -0.28
HPS1-215ENST00000613394 TIGARQ9NQ88 270 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms