RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 SLC13A3Q8WWT9 602 aa12.63□□□□□ -0.39
POLR2J3-219ENST00000608621 CCDC120Q96HB5 630 aa12.63□□□□□ -0.39
POLR2J3-219ENST00000608621 PCBD2Q9H0N5 130 aa12.63□□□□□ -0.39
POLR2J3-219ENST00000608621 KCNK13Q9HB14 408 aa12.63□□□□□ -0.39
POLR2J3-219ENST00000608621 ANKHQ9HCJ1 492 aa12.63□□□□□ -0.39
POLR2J3-219ENST00000608621 SUCOQ9UBS9 1254 aaKnown RBP12.63□□□□□ -0.39
POLR2J3-219ENST00000608621 TRMT6Q9UJA5 497 aaKnown RBP12.63□□□□□ -0.39
POLR2J3-219ENST00000608621 SH3BGRL2Q9UJC5 107 aa12.63□□□□□ -0.39
POLR2J3-219ENST00000608621 NEU2Q9Y3R4 380 aa12.63□□□□□ -0.39
POLR2J3-219ENST00000608621 RDH16O75452 317 aa12.62□□□□□ -0.39
POLR2J3-219ENST00000608621 CA7P43166 264 aa12.62□□□□□ -0.39
POLR2J3-219ENST00000608621 RGS4P49798 205 aa12.62□□□□□ -0.39
POLR2J3-219ENST00000608621 AGTR2P50052 363 aa12.62□□□□□ -0.39
POLR2J3-219ENST00000608621 RBPJQ06330 500 aa12.62□□□□□ -0.39
POLR2J3-219ENST00000608621 ACTN3Q08043 901 aaPredicted RBP12.62□□□□□ -0.39
POLR2J3-219ENST00000608621 CAPN13Q6MZZ7 669 aaPredicted RBP12.62□□□□□ -0.39
POLR2J3-219ENST00000608621 PAQR3Q6TCH7 311 aa12.62□□□□□ -0.39
POLR2J3-219ENST00000608621 ASPGQ86U10 573 aa12.62□□□□□ -0.39
POLR2J3-219ENST00000608621 PDSS2Q86YH6 399 aa12.62□□□□□ -0.39
POLR2J3-219ENST00000608621 LRRC8AQ8IWT6 810 aa12.62□□□□□ -0.39
POLR2J3-219ENST00000608621 PALM2Q8IXS6 379 aa12.62□□□□□ -0.39
POLR2J3-219ENST00000608621 BEST3Q8N1M1 668 aa12.62□□□□□ -0.39
POLR2J3-219ENST00000608621 NAT8LQ8N9F0 302 aa12.62□□□□□ -0.39
POLR2J3-219ENST00000608621 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.62□□□□□ -0.39
POLR2J3-219ENST00000608621 PLPP5Q8NEB5 264 aa12.62□□□□□ -0.39
POLR2J3-219ENST00000608621 M1APQ8TC57 530 aa12.62□□□□□ -0.39
POLR2J3-219ENST00000608621 PBKQ96KB5 322 aa12.62□□□□□ -0.39
POLR2J3-219ENST00000608621 SIGLEC12Q96PQ1 595 aa12.62□□□□□ -0.39
POLR2J3-219ENST00000608621 NDNQ99608 321 aa12.62□□□□□ -0.39
POLR2J3-219ENST00000608621 RUBCNLQ9H714 662 aa12.62□□□□□ -0.39
POLR2J3-219ENST00000608621 PARVBQ9HBI1 364 aa12.62□□□□□ -0.39
POLR2J3-219ENST00000608621 NAALAD2Q9Y3Q0 740 aa12.62□□□□□ -0.39
POLR2J3-219ENST00000608621 PCNX1Q96RV3 2341 aa12.61□□□□□ -0.39
POLR2J3-219ENST00000608621 TTI1O43156 1089 aa12.61□□□□□ -0.39
POLR2J3-219ENST00000608621 C8GP07360 202 aa12.61□□□□□ -0.39
POLR2J3-219ENST00000608621 CDH1P12830 882 aa12.61□□□□□ -0.39
POLR2J3-219ENST00000608621 NPPBP16860 134 aa12.61□□□□□ -0.39
POLR2J3-219ENST00000608621 GRK3P35626 688 aa12.61□□□□□ -0.39
POLR2J3-219ENST00000608621 CD96P40200 585 aa12.61□□□□□ -0.39
POLR2J3-219ENST00000608621 TUBA3CQ13748 450 aa12.61□□□□□ -0.39
POLR2J3-219ENST00000608621 NSDHLQ15738 373 aa12.61□□□□□ -0.39
POLR2J3-219ENST00000608621 EXT1Q16394 746 aa12.61□□□□□ -0.39
POLR2J3-219ENST00000608621 CYP1B1Q16678 543 aa12.61□□□□□ -0.39
POLR2J3-219ENST00000608621 MEP1AQ16819 746 aa12.61□□□□□ -0.39
POLR2J3-219ENST00000608621 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.61□□□□□ -0.39
POLR2J3-219ENST00000608621 SFT2D3Q587I9 215 aa12.61□□□□□ -0.39
POLR2J3-219ENST00000608621 LRRC8EQ6NSJ5 796 aa12.61□□□□□ -0.39
POLR2J3-219ENST00000608621 TUBA3EQ6PEY2 450 aa12.61□□□□□ -0.39
POLR2J3-219ENST00000608621 LCTLQ6UWM7 567 aa12.61□□□□□ -0.39
POLR2J3-219ENST00000608621 PCGF5Q86SE9 256 aa12.61□□□□□ -0.39
POLR2J3-219ENST00000608621 CRLF3Q8IUI8 442 aa12.61□□□□□ -0.39
POLR2J3-219ENST00000608621 ZNF808Q8N4W9 903 aaPredicted RBP12.61□□□□□ -0.39
POLR2J3-219ENST00000608621 MFSD9Q8NBP5 474 aa12.61□□□□□ -0.39
POLR2J3-219ENST00000608621 C2CD4AQ8NCU7 369 aaPredicted RBP12.61□□□□□ -0.39
POLR2J3-219ENST00000608621 PEX11GQ96HA9 241 aa12.61□□□□□ -0.39
POLR2J3-219ENST00000608621 NPAS2Q99743 824 aa12.61□□□□□ -0.39
POLR2J3-219ENST00000608621 FAM167BQ9BTA0 163 aa12.61□□□□□ -0.39
POLR2J3-219ENST00000608621 SGPP1Q9BX95 441 aa12.61□□□□□ -0.39
POLR2J3-219ENST00000608621 HES7Q9BYE0 225 aa12.61□□□□□ -0.39
POLR2J3-219ENST00000608621 KLHL1Q9NR64 748 aa12.61□□□□□ -0.39
POLR2J3-219ENST00000608621 ANKRD10Q9NXR5 420 aa12.61□□□□□ -0.39
POLR2J3-219ENST00000608621 TAS2R13Q9NYV9 303 aa12.61□□□□□ -0.39
POLR2J3-219ENST00000608621 PPP2R2CQ9Y2T4 447 aa12.61□□□□□ -0.39
POLR2J3-219ENST00000608621 PCDHGB6Q9Y5F9 930 aa12.61□□□□□ -0.39
POLR2J3-219ENST00000608621 KLF2Q9Y5W3 355 aaPredicted RBP12.61□□□□□ -0.39
POLR2J3-219ENST00000608621 SLC22A7Q9Y694 548 aa12.61□□□□□ -0.39
POLR2J3-219ENST00000608621 APCP25054 2843 aa12.61□□□□□ -0.39
POLR2J3-219ENST00000608621 ZNF860A6NHJ4 632 aa12.6□□□□□ -0.39
POLR2J3-219ENST00000608621 SLC16A5O15375 505 aa12.6□□□□□ -0.39
POLR2J3-219ENST00000608621 MAN1A2O60476 641 aa12.6□□□□□ -0.39
POLR2J3-219ENST00000608621 DNAJB6O75190 326 aa12.6□□□□□ -0.39
POLR2J3-219ENST00000608621 CDC123O75794 336 aaPredicted RBP12.6□□□□□ -0.39
POLR2J3-219ENST00000608621 AHSGP02765 367 aa12.6□□□□□ -0.39
POLR2J3-219ENST00000608621 HIST1H2AGP0C0S8 130 aaPredicted RBP12.6□□□□□ -0.39
POLR2J3-219ENST00000608621 HIST1H2ADP20671 130 aa12.6□□□□□ -0.39
POLR2J3-219ENST00000608621 CCND1P24385 295 aa12.6□□□□□ -0.39
POLR2J3-219ENST00000608621 GABRB3P28472 473 aa12.6□□□□□ -0.39
POLR2J3-219ENST00000608621 HTR1EP28566 365 aa12.6□□□□□ -0.39
POLR2J3-219ENST00000608621 MEF2AQ02078 507 aaPredicted RBP12.6□□□□□ -0.39
POLR2J3-219ENST00000608621 RHAGQ02094 409 aa12.6□□□□□ -0.39
POLR2J3-219ENST00000608621 PHKG1Q16816 387 aa12.6□□□□□ -0.39
POLR2J3-219ENST00000608621 ZXDCQ2QGD7 858 aaPredicted RBP12.6□□□□□ -0.39
POLR2J3-219ENST00000608621 RBM20Q5T481 1227 aaKnown RBP12.6□□□□□ -0.39
POLR2J3-219ENST00000608621 SPINK14Q6IE38 97 aa12.6□□□□□ -0.39
POLR2J3-219ENST00000608621 MTFR2Q6P444 385 aa12.6□□□□□ -0.39
POLR2J3-219ENST00000608621 PAPD4Q6PIY7 484 aaKnown RBP12.6□□□□□ -0.39
POLR2J3-219ENST00000608621 PPIL6Q8IXY8 311 aa12.6□□□□□ -0.39
POLR2J3-219ENST00000608621 MYO1HQ8N1T3 1032 aa12.6□□□□□ -0.39
POLR2J3-219ENST00000608621 MDS2Q8NDY4 140 aa12.6□□□□□ -0.39
POLR2J3-219ENST00000608621 OR5T3Q8NGG3 340 aa12.6□□□□□ -0.39
POLR2J3-219ENST00000608621 PYCR2Q96C36 320 aa12.6□□□□□ -0.39
POLR2J3-219ENST00000608621 MOCOSQ96EN8 888 aa12.6□□□□□ -0.39
POLR2J3-219ENST00000608621 HIST1H2AHQ96KK5 128 aa12.6□□□□□ -0.39
POLR2J3-219ENST00000608621 LPAR4Q99677 370 aa12.6□□□□□ -0.39
POLR2J3-219ENST00000608621 HIST1H2AJQ99878 128 aa12.6□□□□□ -0.39
POLR2J3-219ENST00000608621 UTP23Q9BRU9 249 aaKnown RBP12.6□□□□□ -0.39
POLR2J3-219ENST00000608621 H2AFJQ9BTM1 129 aa12.6□□□□□ -0.39
POLR2J3-219ENST00000608621 RBCK1Q9BYM8 510 aa12.6□□□□□ -0.39
POLR2J3-219ENST00000608621 FAM129AQ9BZQ8 928 aa12.6□□□□□ -0.39
POLR2J3-219ENST00000608621 MMP25Q9NPA2 562 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms