RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 FAM78AQ5JUQ0 283 aa11.11□□□□□ -0.63
ARHGEF1-220ENST00000600274 TMEM240Q5SV17 173 aa11.11□□□□□ -0.63
ARHGEF1-220ENST00000600274 C11orf74Q86VG3 221 aa11.11□□□□□ -0.63
ARHGEF1-220ENST00000600274 NAGSQ8N159 534 aa11.11□□□□□ -0.63
ARHGEF1-220ENST00000600274 CELF5Q8N6W0 485 aaKnown RBP11.11□□□□□ -0.63
ARHGEF1-220ENST00000600274 XKR8Q9H6D3 395 aa11.11□□□□□ -0.63
ARHGEF1-220ENST00000600274 TAC3Q9UHF0 121 aa11.11□□□□□ -0.63
ARHGEF1-220ENST00000600274 TRBV23OR9-2A0A075B6M9 112 aa11.11□□□□□ -0.63
ARHGEF1-220ENST00000600274 BCKDKO14874 412 aa11.11□□□□□ -0.63
ARHGEF1-220ENST00000600274 PPIGQ13427 754 aaKnown RBP eCLIP11.11□□□□□ -0.631e-7■■■□□ 15.9
ARHGEF1-220ENST00000600274 GAB1Q13480 694 aa11.11□□□□□ -0.63
ARHGEF1-220ENST00000600274 SMN1Q16637 294 aaKnown RBP11.11□□□□□ -0.63
ARHGEF1-220ENST00000600274 TTC23Q5W5X9 447 aa11.11□□□□□ -0.63
ARHGEF1-220ENST00000600274 GPR153Q6NV75 609 aa11.11□□□□□ -0.63
ARHGEF1-220ENST00000600274 L3MBTL4Q8NA19 623 aa11.11□□□□□ -0.63
ARHGEF1-220ENST00000600274 RHNO1Q9BSD3 238 aa11.11□□□□□ -0.63
ARHGEF1-220ENST00000600274 IMP3Q9NV31 184 aaKnown RBP11.11□□□□□ -0.63
ARHGEF1-220ENST00000600274 C3orf18Q9UK00 162 aa11.11□□□□□ -0.63
ARHGEF1-220ENST00000600274 PLXNA4Q9HCM2 1894 aa11.11□□□□□ -0.63
ARHGEF1-220ENST00000600274 LOC100130705A0A1B0GUX0 176 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 IGLON5A6NGN9 336 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 H0Y858 1186 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 SLCO2B1O94956 709 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 PAK4O96013 591 aaPredicted RBP11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 LINC00271P0C7V0 271 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 ADRB3P13945 408 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 HPCAL1P37235 193 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 SOX9P48436 509 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 RAD23AP54725 363 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 CTBSQ01459 385 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 RAPSNQ13702 412 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 CAMK1Q14012 370 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 HIST2H2ACQ16777 129 aaPredicted RBP11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 VMACQ2NL98 169 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 HIST2H2AA3Q6FI13 130 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 DPPA4Q7L190 304 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 RD3Q7Z3Z2 195 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 FAM124AQ86V42 546 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 HEATR4Q86WZ0 1026 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 LSRQ86X29 649 aaPredicted RBP11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 AADATQ8N5Z0 425 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 FNDC8Q8TC99 324 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 RBM4BQ9BQ04 359 aaKnown RBP11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 RBM4Q9BWF3 364 aaKnown RBP11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 GORASP2Q9H8Y8 452 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 CD320Q9NPF0 282 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 PRDM8Q9NQV8 689 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 RHCGQ9UBD6 479 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 M0R129 80 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 KIAA0355O15063 1070 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 PRSS23O95084 383 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 C1orf105O95561 183 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 ALPPL2P10696 532 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 POU1F1P28069 291 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 KDELR2P33947 212 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 RXRGP48443 463 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 IDH2P48735 452 aaKnown RBP11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 SP140Q13342 867 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 GANABQ14697 944 aaKnown RBP11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 COX20Q5RI15 118 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 ATG9BQ674R7 924 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 PSRC1Q6PGN9 363 aaPredicted RBP11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 PRR23BQ6ZRT6 265 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 FAM83HQ6ZRV2 1179 aaPredicted RBP11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 COMMD6Q7Z4G1 85 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 GPR149Q86SP6 731 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 FGF13Q92913 245 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 NRBF2Q96F24 287 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 DTD2Q96FN9 168 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 REEP1Q9H902 201 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 RAB23Q9ULC3 237 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 PPIL1Q9Y3C6 166 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 GMPPBQ9Y5P6 360 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 RFXAPO00287 272 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 FABP3P05413 133 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 ACP5P13686 325 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 CD247P20963 164 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 PSMB9P28065 219 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 PRLHRP49683 370 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 PLA2G16P53816 162 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 ADARB1P78563 741 aaKnown RBP11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 SRSF11Q05519 484 aaKnown RBP11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 GPM6BQ13491 265 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 ZBED5Q49AG3 693 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 C2orf27AQ580R0 203 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 BROXQ5VW32 411 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 LIPJQ5W064 366 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 TNFAIP8L2Q6P589 184 aaPredicted RBP11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 TECPR1Q7Z6L1 1165 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 UTP15Q8TED0 518 aaKnown RBP11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 PPCDCQ96CD2 204 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 FZD3Q9NPG1 666 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 CCDC177Q9NQR7 707 aaPredicted RBP11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 SAMD4AQ9UPU9 718 aaKnown RBP11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 GBF1Q92538 1859 aa11.1□□□□□ -0.63
ARHGEF1-220ENST00000600274 H7BY64 318 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 IL12RB1P42701 662 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 DMC1Q14565 340 aa11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 CTU2Q2VPK5 515 aaKnown RBP11.09□□□□□ -0.63
ARHGEF1-220ENST00000600274 SPDYE7PQ495Y7 208 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms