RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 CCL11P51671 97 aa20.01■□□□□ 0.79
PNKP-209ENST00000596726 IRF9Q00978 393 aa20.01■□□□□ 0.79
PNKP-209ENST00000596726 KLC1Q07866 573 aa20.01■□□□□ 0.79
PNKP-209ENST00000596726 CDC16Q13042 620 aa20.01■□□□□ 0.79
PNKP-209ENST00000596726 PWP1Q13610 501 aa20.01■□□□□ 0.79
PNKP-209ENST00000596726 LACTB2Q53H82 288 aaPredicted RBP20.01■□□□□ 0.79
PNKP-209ENST00000596726 VWA2Q5GFL6 755 aa20.01■□□□□ 0.79
PNKP-209ENST00000596726 SLCO4C1Q6ZQN7 724 aa20.01■□□□□ 0.79
PNKP-209ENST00000596726 SHISA6Q6ZSJ9 500 aa20.01■□□□□ 0.79
PNKP-209ENST00000596726 PRSS41Q7RTY9 318 aa20.01■□□□□ 0.79
PNKP-209ENST00000596726 TBC1D19Q8N5T2 526 aa20.01■□□□□ 0.79
PNKP-209ENST00000596726 OR9A4Q8NGU2 314 aa20.01■□□□□ 0.79
PNKP-209ENST00000596726 KCTD4Q8WVF5 259 aa20.01■□□□□ 0.79
PNKP-209ENST00000596726 MOCOSQ96EN8 888 aa20.01■□□□□ 0.79
PNKP-209ENST00000596726 FER1L6-AS2Q96M78 137 aa20.01■□□□□ 0.79
PNKP-209ENST00000596726 AIF1LQ9BQI0 150 aa20.01■□□□□ 0.79
PNKP-209ENST00000596726 TXLNGYQ9BZA5 131 aa20.01■□□□□ 0.79
PNKP-209ENST00000596726 CNOT10Q9H9A5 744 aaKnown RBP20.01■□□□□ 0.79
PNKP-209ENST00000596726 MKKSQ9NPJ1 570 aaPredicted RBP20.01■□□□□ 0.79
PNKP-209ENST00000596726 SEMA3GQ9NS98 782 aa20.01■□□□□ 0.79
PNKP-209ENST00000596726 GPRC5BQ9NZH0 403 aa20.01■□□□□ 0.79
PNKP-209ENST00000596726 NUDT4Q9NZJ9 180 aa20.01■□□□□ 0.79
PNKP-209ENST00000596726 TRPC4Q9UBN4 977 aa20.01■□□□□ 0.79
PNKP-209ENST00000596726 ZFP69BQ9UJL9 534 aa20.01■□□□□ 0.79
PNKP-209ENST00000596726 TP53TG5Q9Y2B4 290 aa20.01■□□□□ 0.79
PNKP-209ENST00000596726 PCDHGA9Q9Y5G4 932 aaKnown RBP20.01■□□□□ 0.79
PNKP-209ENST00000596726 HS3ST3B1Q9Y662 390 aa20.01■□□□□ 0.79
PNKP-209ENST00000596726 SLC22A7Q9Y694 548 aa20.01■□□□□ 0.79
PNKP-209ENST00000596726 DOCK10Q96BY6 2186 aa20.01■□□□□ 0.79
PNKP-209ENST00000596726 FASNP49327 2511 aaKnown RBP20.01■□□□□ 0.79
PNKP-209ENST00000596726 A0A096LPK6 155 aa20■□□□□ 0.79
PNKP-209ENST00000596726 CCDC189A1A4V9 331 aa20■□□□□ 0.79
PNKP-209ENST00000596726 AGPSO00116 658 aa20■□□□□ 0.79
PNKP-209ENST00000596726 STK16O75716 305 aa20■□□□□ 0.79
PNKP-209ENST00000596726 ABHD2P08910 425 aa20■□□□□ 0.79
PNKP-209ENST00000596726 C1GALT1C1LP0DN25 315 aa20■□□□□ 0.79
PNKP-209ENST00000596726 TYK2P29597 1187 aa20■□□□□ 0.79
PNKP-209ENST00000596726 AVPR1BP47901 424 aa20■□□□□ 0.79
PNKP-209ENST00000596726 HSPA7P48741 367 aa20■□□□□ 0.79
PNKP-209ENST00000596726 SERPINB8P50452 374 aa20■□□□□ 0.79
PNKP-209ENST00000596726 FBXO48Q5FWF7 155 aa20■□□□□ 0.79
PNKP-209ENST00000596726 DCAF10Q5QP82 559 aa20■□□□□ 0.79
PNKP-209ENST00000596726 ATG9BQ674R7 924 aa20■□□□□ 0.79
PNKP-209ENST00000596726 TRMT10CQ7L0Y3 403 aaKnown RBP20■□□□□ 0.79
PNKP-209ENST00000596726 LAPTM4BQ86VI4 370 aa20■□□□□ 0.79
PNKP-209ENST00000596726 AFAP1L2Q8N4X5 818 aa20■□□□□ 0.79
PNKP-209ENST00000596726 ANKRD53Q8N9V6 530 aa20■□□□□ 0.79
PNKP-209ENST00000596726 RHEBL1Q8TAI7 183 aa20■□□□□ 0.79
PNKP-209ENST00000596726 UHMK1Q8TAS1 419 aaKnown RBP20■□□□□ 0.79
PNKP-209ENST00000596726 NT5CQ8TCD5 201 aa20■□□□□ 0.79
PNKP-209ENST00000596726 DCAKDQ8WVC6 231 aa20■□□□□ 0.79
PNKP-209ENST00000596726 ESAMQ96AP7 390 aa20■□□□□ 0.79
PNKP-209ENST00000596726 GPR78Q96P69 363 aa20■□□□□ 0.79
PNKP-209ENST00000596726 CAPS2Q9BXY5 557 aa20■□□□□ 0.79
PNKP-209ENST00000596726 DNAJC11Q9NVH1 559 aa20■□□□□ 0.79
PNKP-209ENST00000596726 COPG2Q9UBF2 871 aa20■□□□□ 0.79
PNKP-209ENST00000596726 ZNF180Q9UJW8 692 aa20■□□□□ 0.79
PNKP-209ENST00000596726 POC1B-GALNT4F8VUJ3 575 aa19.99■□□□□ 0.79
PNKP-209ENST00000596726 FFAR3O14843 346 aa19.99■□□□□ 0.79
PNKP-209ENST00000596726 GPR42O15529 346 aa19.99■□□□□ 0.79
PNKP-209ENST00000596726 KLHL2O95198 593 aa19.99■□□□□ 0.79
PNKP-209ENST00000596726 PDGFAP04085 211 aa19.99■□□□□ 0.79
PNKP-209ENST00000596726 FAM153BP0C7A2 387 aa19.99■□□□□ 0.79
PNKP-209ENST00000596726 MTHFD2P13995 350 aa19.99■□□□□ 0.79
PNKP-209ENST00000596726 NR1D1P20393 614 aa19.99■□□□□ 0.79
PNKP-209ENST00000596726 VARSP26640 1264 aaKnown RBP19.99■□□□□ 0.79
PNKP-209ENST00000596726 SYT16Q17RD7 645 aa19.99■□□□□ 0.79
PNKP-209ENST00000596726 FAM83EQ2M2I3 478 aa19.99■□□□□ 0.79
PNKP-209ENST00000596726 FAM153CQ494X1 144 aa19.99■□□□□ 0.79
PNKP-209ENST00000596726 KIRREL2Q6UWL6 708 aa19.99■□□□□ 0.79
PNKP-209ENST00000596726 ZNF605Q86T29 641 aa19.99■□□□□ 0.79
PNKP-209ENST00000596726 EIF1ADQ8N9N8 165 aaKnown RBP19.99■□□□□ 0.79
PNKP-209ENST00000596726 EXT2Q93063 718 aa19.99■□□□□ 0.79
PNKP-209ENST00000596726 CRB3Q9BUF7 120 aa19.99■□□□□ 0.79
PNKP-209ENST00000596726 SLC25A23Q9BV35 468 aa19.99■□□□□ 0.79
PNKP-209ENST00000596726 C14orf105Q9NVL8 296 aa19.99■□□□□ 0.79
PNKP-209ENST00000596726 IKBKGQ9Y6K9 419 aa19.99■□□□□ 0.79
PNKP-209ENST00000596726 UBXN8O00124 270 aa19.98■□□□□ 0.79
PNKP-209ENST00000596726 NDUFS4O43181 175 aa19.98■□□□□ 0.79
PNKP-209ENST00000596726 RIPK2O43353 540 aa19.98■□□□□ 0.79
PNKP-209ENST00000596726 SUV39H1O43463 412 aa19.98■□□□□ 0.79
PNKP-209ENST00000596726 PRAMEF4O60810 478 aa19.98■□□□□ 0.79
PNKP-209ENST00000596726 H2AFYO75367 372 aaKnown RBP19.98■□□□□ 0.79
PNKP-209ENST00000596726 S100BP04271 92 aaPredicted RBP19.98■□□□□ 0.79
PNKP-209ENST00000596726 IL1RNP18510 177 aa19.98■□□□□ 0.79
PNKP-209ENST00000596726 CNTFP26441 200 aa19.98■□□□□ 0.79
PNKP-209ENST00000596726 MSH2P43246 934 aa19.98■□□□□ 0.79
PNKP-209ENST00000596726 SOX8P57073 446 aa19.98■□□□□ 0.79
PNKP-209ENST00000596726 MAT1AQ00266 395 aaKnown RBP19.98■□□□□ 0.79
PNKP-209ENST00000596726 HYAL2Q12891 473 aa19.98■□□□□ 0.79
PNKP-209ENST00000596726 ACAP2Q15057 778 aa19.98■□□□□ 0.79
PNKP-209ENST00000596726 PRAMEF9Q5VWM5 478 aa19.98■□□□□ 0.79
PNKP-209ENST00000596726 PTRH1Q86Y79 214 aaKnown RBP19.98■□□□□ 0.79
PNKP-209ENST00000596726 PDSS2Q86YH6 399 aa19.98■□□□□ 0.79
PNKP-209ENST00000596726 ZC3H7AQ8IWR0 971 aaKnown RBP19.98■□□□□ 0.79
PNKP-209ENST00000596726 PRSS58Q8IYP2 241 aa19.98■□□□□ 0.79
PNKP-209ENST00000596726 FDCSPQ8NFU4 85 aa19.98■□□□□ 0.79
PNKP-209ENST00000596726 ZCCHC10Q8TBK6 192 aa19.98■□□□□ 0.79
PNKP-209ENST00000596726 UBTD2Q8WUN7 234 aa19.98■□□□□ 0.79
PNKP-209ENST00000596726 YIPF2Q9BWQ6 316 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms