RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 LAPTM4BQ86VI4 370 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 IFT20Q8IY31 132 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 GSPT2Q8IYD1 628 aaKnown RBP10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 OR9A4Q8NGU2 314 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 DCAKDQ8WVC6 231 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 ISL2Q96A47 359 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 NXNL1Q96CM4 212 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 MMABQ96EY8 250 aaPredicted RBP10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 GPR78Q96P69 363 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 PAFAH2Q99487 392 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 AICDAQ9GZX7 198 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 EPB41L4BQ9H329 900 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 PELI2Q9HAT8 420 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 MLXIPLQ9NP71 852 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 P4HTMQ9NXG6 502 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 ZNF282Q9UDV7 671 aaPredicted RBP10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 PTBP2Q9UKA9 531 aaKnown RBP10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 NXT1Q9UKK6 140 aaKnown RBP10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 RNF112Q9ULX5 631 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 ACOT9Q9Y305 439 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 DYRK1BQ9Y463 629 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 HS3ST3B1Q9Y662 390 aa10.43□□□□□ -0.74
SHKBP1-206ENST00000595523 A0A096LPK6 155 aa10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 C4orf51C9J302 202 aa10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 MKRN2OSH3BPM6 223 aa10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 UBXN8O00124 270 aa10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 NDUFS4O43181 175 aa10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 KERAO60938 352 aa10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 ALOX12BO75342 701 aa10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 NSA2O95478 260 aaKnown RBP10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 MMP11P24347 488 aa10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 GRK3P35626 688 aa10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 HSPA7P48741 367 aa10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 SERPINB8P50452 374 aa10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 CCL11P51671 97 aa10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 HYAL2Q12891 473 aa10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 CDC16Q13042 620 aa10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 LACTB2Q53H82 288 aaPredicted RBP10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 DCAF10Q5QP82 559 aa10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 SULT1C3Q6IMI6 304 aa10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 TCTN3Q6NUS6 607 aa10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 KIRREL2Q6UWL6 708 aa10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 MED25Q71SY5 747 aa10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 PTRH1Q86Y79 214 aaKnown RBP10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 ZC3H7AQ8IWR0 971 aaKnown RBP10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 PRSS58Q8IYP2 241 aa10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 PLD6Q8N2A8 252 aaKnown RBP10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 TCAIMQ8N3R3 496 aa10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 AFAP1L2Q8N4X5 818 aa10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 TMEM102Q8N9M5 508 aaPredicted RBP10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 CAMKVQ8NCB2 501 aa10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 ZCCHC10Q8TBK6 192 aa10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 STAG3L4Q8TBR4 150 aa10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 SLC13A3Q8WWT9 602 aa10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 EXT2Q93063 718 aa10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 IP6K3Q96PC2 410 aa10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 NUDT9Q9BW91 350 aa10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 NMRAL1Q9HBL8 299 aa10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 ACSS2Q9NR19 701 aa10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 WWOXQ9NZC7 414 aa10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 CD274Q9NZQ7 290 aa10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 TRPC4Q9UBN4 977 aa10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 ZFP69BQ9UJL9 534 aa10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 CDC14AQ9UNH5 594 aa10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 MAP4K5Q9Y4K4 846 aa10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 PCDHGA9Q9Y5G4 932 aaKnown RBP10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 KCNE2Q9Y6J6 123 aa10.42□□□□□ -0.74
SHKBP1-206ENST00000595523 LRRK2Q5S007 2527 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 A0A087WUV0 522 aaPredicted RBP10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 A0A087X1B8 175 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 POC1B-GALNT4F8VUJ3 575 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 H0YIG0 161 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 SGK494L7N484 410 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 AGPSO00116 658 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 RIPK2O43353 540 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 SUV39H1O43463 412 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 DNAJB6O75190 326 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 JRKO75564 520 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 STK16O75716 305 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 IPO13O94829 963 aaKnown RBP10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 KLHL2O95198 593 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 B3GALT4O96024 378 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 INHBAP08476 426 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 ABHD2P08910 425 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 SLC35G6P0C7Q6 338 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 C1GALT1C1LP0DN25 315 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 PLA2G2AP14555 144 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 GNAZP19086 355 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 CD22P20273 847 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 AHRP35869 848 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 GLRBP48167 497 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 AGTR2P50052 363 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 OCA2Q04671 838 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 PWP1Q13610 501 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 NDUFA9Q16795 377 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 COLEC12Q5KU26 742 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 ATG9BQ674R7 924 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 ADNP2Q6IQ32 1131 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 CCDC91Q7Z6B0 441 aa10.41□□□□□ -0.74
SHKBP1-206ENST00000595523 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms