RNA–Protein interactions for RNA: ENST00000593700.5

CAPN12-202, Transcript of calpain 12, humanhuman

TSL 1 (best)

Gene CAPN12, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-202ENST00000593700 Q6ZSR9 355 aa14.06□□□□□ -0.16
CAPN12-202ENST00000593700 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.06□□□□□ -0.16
CAPN12-202ENST00000593700 MIER2Q8N344 545 aa14.06□□□□□ -0.16
CAPN12-202ENST00000593700 CPSF7Q8N684 471 aaKnown RBP14.06□□□□□ -0.16
CAPN12-202ENST00000593700 OR2T11Q8NH01 316 aa14.06□□□□□ -0.16
CAPN12-202ENST00000593700 SAP25Q8TEE9 199 aa14.06□□□□□ -0.16
CAPN12-202ENST00000593700 NAT6Q93015 286 aa14.06□□□□□ -0.16
CAPN12-202ENST00000593700 TCEAL3Q969E4 200 aa14.06□□□□□ -0.16
CAPN12-202ENST00000593700 MTFMTQ96DP5 389 aaKnown RBP14.06□□□□□ -0.16
CAPN12-202ENST00000593700 CMTM5Q96DZ9 223 aa14.06□□□□□ -0.16
CAPN12-202ENST00000593700 PRAP1Q96NZ9 151 aa14.06□□□□□ -0.16
CAPN12-202ENST00000593700 CD180Q99467 661 aa14.06□□□□□ -0.16
CAPN12-202ENST00000593700 MTERF1Q99551 399 aaKnown RBP14.06□□□□□ -0.16
CAPN12-202ENST00000593700 RTKNQ9BST9 563 aa14.06□□□□□ -0.16
CAPN12-202ENST00000593700 GTPBP2Q9BX10 602 aaKnown RBP14.06□□□□□ -0.16
CAPN12-202ENST00000593700 TBC1D10AQ9BXI6 508 aa14.06□□□□□ -0.16
CAPN12-202ENST00000593700 TWSG1Q9GZX9 223 aa14.06□□□□□ -0.16
CAPN12-202ENST00000593700 RHBGQ9H310 441 aa14.06□□□□□ -0.16
CAPN12-202ENST00000593700 SMOC1Q9H4F8 434 aa14.06□□□□□ -0.16
CAPN12-202ENST00000593700 SLC6A20Q9NP91 592 aa14.06□□□□□ -0.16
CAPN12-202ENST00000593700 FARSBQ9NSD9 589 aaKnown RBP14.06□□□□□ -0.16
CAPN12-202ENST00000593700 ASIC5Q9NY37 505 aa14.06□□□□□ -0.16
CAPN12-202ENST00000593700 AHSPQ9NZD4 102 aa14.06□□□□□ -0.16
CAPN12-202ENST00000593700 POMT2Q9UKY4 750 aa14.06□□□□□ -0.16
CAPN12-202ENST00000593700 RUVBL1Q9Y265 456 aaKnown RBP14.06□□□□□ -0.16
CAPN12-202ENST00000593700 ASCC3Q8N3C0 2202 aaKnown RBP14.06□□□□□ -0.16
CAPN12-202ENST00000593700 COL5A1P20908 1838 aaPredicted RBP14.06□□□□□ -0.16
CAPN12-202ENST00000593700 MAGEB17A8MXT2 336 aa14.05□□□□□ -0.16
CAPN12-202ENST00000593700 SLC30A4O14863 429 aa14.05□□□□□ -0.16
CAPN12-202ENST00000593700 PPM1DO15297 605 aa14.05□□□□□ -0.16
CAPN12-202ENST00000593700 OR1F1O43749 312 aa14.05□□□□□ -0.16
CAPN12-202ENST00000593700 PCDHGA12O60330 932 aa14.05□□□□□ -0.16
CAPN12-202ENST00000593700 SEMA3DO95025 777 aa14.05□□□□□ -0.16
CAPN12-202ENST00000593700 PRPS2P11908 318 aa14.05□□□□□ -0.16
CAPN12-202ENST00000593700 CDH3P22223 829 aa14.05□□□□□ -0.16
CAPN12-202ENST00000593700 CALB2P22676 271 aa14.05□□□□□ -0.16
CAPN12-202ENST00000593700 AHRP35869 848 aa14.05□□□□□ -0.16
CAPN12-202ENST00000593700 UBAP2LQ14157 1087 aaKnown RBP14.05□□□□□ -0.16
CAPN12-202ENST00000593700 STPG1Q5TH74 334 aa14.05□□□□□ -0.16
CAPN12-202ENST00000593700 KIAA1614Q5VZ46 1190 aa14.05□□□□□ -0.16
CAPN12-202ENST00000593700 TMEM198Q66K66 360 aa14.05□□□□□ -0.16
CAPN12-202ENST00000593700 ZNF425Q6IV72 752 aa14.05□□□□□ -0.16
CAPN12-202ENST00000593700 FOXR1Q6PIV2 292 aa14.05□□□□□ -0.16
CAPN12-202ENST00000593700 THSD4Q6ZMP0 1018 aa14.05□□□□□ -0.16
CAPN12-202ENST00000593700 ZNF761Q86XN6 746 aaPredicted RBP14.05□□□□□ -0.16
CAPN12-202ENST00000593700 SLC35F3Q8IY50 421 aa14.05□□□□□ -0.16
CAPN12-202ENST00000593700 DEPDC4Q8N2C3 294 aa14.05□□□□□ -0.16
CAPN12-202ENST00000593700 SLC25A45Q8N413 288 aa14.05□□□□□ -0.16
CAPN12-202ENST00000593700 ZNF655Q8N720 491 aaPredicted RBP14.05□□□□□ -0.16
CAPN12-202ENST00000593700 TRPV3Q8NET8 790 aa14.05□□□□□ -0.16
CAPN12-202ENST00000593700 STARD8Q92502 1023 aa14.05□□□□□ -0.16
CAPN12-202ENST00000593700 RSC1A1Q92681 617 aa14.05□□□□□ -0.16
CAPN12-202ENST00000593700 ZUFSPQ96AP4 578 aa14.05□□□□□ -0.16
CAPN12-202ENST00000593700 OR2A14Q96R47 310 aa14.05□□□□□ -0.16
CAPN12-202ENST00000593700 SARGQ9BW04 601 aa14.05□□□□□ -0.16
CAPN12-202ENST00000593700 CCDC106Q9BWC9 280 aa14.05□□□□□ -0.16
CAPN12-202ENST00000593700 CAAP1Q9H8G2 361 aa14.05□□□□□ -0.16
CAPN12-202ENST00000593700 AIG1Q9NVV5 245 aa14.05□□□□□ -0.16
CAPN12-202ENST00000593700 TMEM45AQ9NWC5 275 aa14.05□□□□□ -0.16
CAPN12-202ENST00000593700 ARMCX1Q9P291 453 aa14.05□□□□□ -0.16
CAPN12-202ENST00000593700 LRIT1Q9P2V4 623 aa14.05□□□□□ -0.16
CAPN12-202ENST00000593700 G3BP2Q9UN86 482 aaKnown RBP14.05□□□□□ -0.16
CAPN12-202ENST00000593700 MAPRE3Q9UPY8 281 aa14.05□□□□□ -0.16
CAPN12-202ENST00000593700 POLR3HQ9Y535 204 aaPredicted RBP14.05□□□□□ -0.16
CAPN12-202ENST00000593700 COPG1Q9Y678 874 aaKnown RBP14.05□□□□□ -0.16
CAPN12-202ENST00000593700 CNOT1A5YKK6 2376 aaKnown RBP14.05□□□□□ -0.16
CAPN12-202ENST00000593700 DMDP11532 3685 aa14.04□□□□□ -0.16
CAPN12-202ENST00000593700 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.04□□□□□ -0.16
CAPN12-202ENST00000593700 CDX4O14627 284 aaPredicted RBP14.04□□□□□ -0.16
CAPN12-202ENST00000593700 CLEC3AO75596 197 aa14.04□□□□□ -0.16
CAPN12-202ENST00000593700 SLC35G6P0C7Q6 338 aa14.04□□□□□ -0.16
CAPN12-202ENST00000593700 ESRRAP11474 423 aaPredicted RBP14.04□□□□□ -0.16
CAPN12-202ENST00000593700 PNLIPP16233 465 aa14.04□□□□□ -0.16
CAPN12-202ENST00000593700 TYRP1P17643 537 aa14.04□□□□□ -0.16
CAPN12-202ENST00000593700 MAGP20916 626 aa14.04□□□□□ -0.16
CAPN12-202ENST00000593700 PTX3P26022 381 aaPredicted RBP14.04□□□□□ -0.16
CAPN12-202ENST00000593700 GRIA3P42263 894 aa14.04□□□□□ -0.16
CAPN12-202ENST00000593700 SCTRP47872 440 aa14.04□□□□□ -0.16
CAPN12-202ENST00000593700 MRPL19P49406 292 aaKnown RBP14.04□□□□□ -0.16
CAPN12-202ENST00000593700 DUSP3P51452 185 aaPredicted RBP14.04□□□□□ -0.16
CAPN12-202ENST00000593700 MMP16P51512 607 aa14.04□□□□□ -0.16
CAPN12-202ENST00000593700 NEK2P51955 445 aa14.04□□□□□ -0.16
CAPN12-202ENST00000593700 RAP1GDS1P52306 607 aa14.04□□□□□ -0.16
CAPN12-202ENST00000593700 RPS13P62277 151 aaKnown RBP14.04□□□□□ -0.16
CAPN12-202ENST00000593700 RELAQ04206 551 aa14.04□□□□□ -0.16
CAPN12-202ENST00000593700 RGS1Q08116 209 aa14.04□□□□□ -0.16
CAPN12-202ENST00000593700 TGM3Q08188 693 aa14.04□□□□□ -0.16
CAPN12-202ENST00000593700 KLF10Q13118 480 aa14.04□□□□□ -0.16
CAPN12-202ENST00000593700 CUL3Q13618 768 aa14.04□□□□□ -0.16
CAPN12-202ENST00000593700 NR1D2Q14995 579 aa14.04□□□□□ -0.16
CAPN12-202ENST00000593700 HERC3Q15034 1050 aa14.04□□□□□ -0.16
CAPN12-202ENST00000593700 PDCD4Q53EL6 469 aaKnown RBP14.04□□□□□ -0.16
CAPN12-202ENST00000593700 IRGCQ6NXR0 463 aa14.04□□□□□ -0.16
CAPN12-202ENST00000593700 KANSL1Q7Z3B3 1105 aa14.04□□□□□ -0.16
CAPN12-202ENST00000593700 ZNF438Q7Z4V0 828 aa14.04□□□□□ -0.16
CAPN12-202ENST00000593700 GATAD2AQ86YP4 633 aa14.04□□□□□ -0.16
CAPN12-202ENST00000593700 SFTPA2Q8IWL1 248 aa14.04□□□□□ -0.16
CAPN12-202ENST00000593700 CARFQ8N187 725 aa14.04□□□□□ -0.16
CAPN12-202ENST00000593700 FAM181AQ8N9Y4 354 aa14.04□□□□□ -0.16
CAPN12-202ENST00000593700 KCTD12Q96CX2 325 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms