RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 EXT1Q16394 746 aa22.56■■□□□ 1.2
LSM4-202ENST00000593564 MTFR2Q6P444 385 aa22.56■■□□□ 1.2
LSM4-202ENST00000593564 CCDC137Q6PK04 289 aaKnown RBP22.56■■□□□ 1.2
LSM4-202ENST00000593564 MBOAT1Q6ZNC8 495 aa22.56■■□□□ 1.2
LSM4-202ENST00000593564 PDSS2Q86YH6 399 aa22.56■■□□□ 1.2
LSM4-202ENST00000593564 BEST3Q8N1M1 668 aa22.56■■□□□ 1.2
LSM4-202ENST00000593564 KCT2Q8NC54 265 aa22.56■■□□□ 1.2
LSM4-202ENST00000593564 EEF1AKMT1Q8WVE0 214 aa22.56■■□□□ 1.2
LSM4-202ENST00000593564 CCDC120Q96HB5 630 aa22.56■■□□□ 1.2
LSM4-202ENST00000593564 SGPP1Q9BX95 441 aa22.56■■□□□ 1.2
LSM4-202ENST00000593564 UNKQ9C0B0 810 aaKnown RBP22.56■■□□□ 1.2
LSM4-202ENST00000593564 RUBCNLQ9H714 662 aa22.56■■□□□ 1.2
LSM4-202ENST00000593564 PARVBQ9HBI1 364 aa22.56■■□□□ 1.2
LSM4-202ENST00000593564 IARS2Q9NSE4 1012 aaKnown RBP22.56■■□□□ 1.2
LSM4-202ENST00000593564 SCN2AQ99250 2005 aa22.56■■□□□ 1.2
LSM4-202ENST00000593564 OR2W5A6NFC9 320 aa22.55■■□□□ 1.2
LSM4-202ENST00000593564 CCL21O00585 134 aa22.55■■□□□ 1.2
LSM4-202ENST00000593564 SLC16A5O15375 505 aa22.55■■□□□ 1.2
LSM4-202ENST00000593564 RDH16O75452 317 aa22.55■■□□□ 1.2
LSM4-202ENST00000593564 IL10P22301 178 aa22.55■■□□□ 1.2
LSM4-202ENST00000593564 GRK3P35626 688 aa22.55■■□□□ 1.2
LSM4-202ENST00000593564 PMP22Q01453 160 aa22.55■■□□□ 1.2
LSM4-202ENST00000593564 FCRLBQ6BAA4 426 aa22.55■■□□□ 1.2
LSM4-202ENST00000593564 CAPN13Q6MZZ7 669 aaPredicted RBP22.55■■□□□ 1.2
LSM4-202ENST00000593564 LCTLQ6UWM7 567 aa22.55■■□□□ 1.2
LSM4-202ENST00000593564 RPTNQ6XPR3 784 aa22.55■■□□□ 1.2
LSM4-202ENST00000593564 SLC26A11Q86WA9 606 aa22.55■■□□□ 1.2
LSM4-202ENST00000593564 PALM2Q8IXS6 379 aa22.55■■□□□ 1.2
LSM4-202ENST00000593564 ZNF808Q8N4W9 903 aaPredicted RBP22.55■■□□□ 1.2
LSM4-202ENST00000593564 C2CD4AQ8NCU7 369 aaPredicted RBP22.55■■□□□ 1.2
LSM4-202ENST00000593564 ZCCHC10Q8TBK6 192 aa22.55■■□□□ 1.2
LSM4-202ENST00000593564 M1APQ8TC57 530 aa22.55■■□□□ 1.2
LSM4-202ENST00000593564 SLC13A3Q8WWT9 602 aa22.55■■□□□ 1.2
LSM4-202ENST00000593564 MS4A14Q96JA4 679 aa22.55■■□□□ 1.2
LSM4-202ENST00000593564 PBKQ96KB5 322 aa22.55■■□□□ 1.2
LSM4-202ENST00000593564 NDNQ99608 321 aa22.55■■□□□ 1.2
LSM4-202ENST00000593564 ATG10Q9H0Y0 220 aa22.55■■□□□ 1.2
LSM4-202ENST00000593564 KCNK13Q9HB14 408 aa22.55■■□□□ 1.2
LSM4-202ENST00000593564 MMP25Q9NPA2 562 aa22.55■■□□□ 1.2
LSM4-202ENST00000593564 TAS2R13Q9NYV9 303 aa22.55■■□□□ 1.2
LSM4-202ENST00000593564 SLC22A7Q9Y694 548 aa22.55■■□□□ 1.2
LSM4-202ENST00000593564 LCMT2O60294 686 aaKnown RBP22.54■■□□□ 1.2
LSM4-202ENST00000593564 SLC35G6P0C7Q6 338 aa22.54■■□□□ 1.2
LSM4-202ENST00000593564 NAE1Q13564 534 aa22.54■■□□□ 1.2
LSM4-202ENST00000593564 TUBA3CQ13748 450 aa22.54■■□□□ 1.2
LSM4-202ENST00000593564 TUBA3EQ6PEY2 450 aa22.54■■□□□ 1.2
LSM4-202ENST00000593564 LRRC8AQ8IWT6 810 aa22.54■■□□□ 1.2
LSM4-202ENST00000593564 MYO1HQ8N1T3 1032 aa22.54■■□□□ 1.2
LSM4-202ENST00000593564 MFSD9Q8NBP5 474 aa22.54■■□□□ 1.2
LSM4-202ENST00000593564 MDS2Q8NDY4 140 aa22.54■■□□□ 1.2
LSM4-202ENST00000593564 PLPP5Q8NEB5 264 aa22.54■■□□□ 1.2
LSM4-202ENST00000593564 OR1F2PQ96R84 312 aa22.54■■□□□ 1.2
LSM4-202ENST00000593564 NAP1L3Q99457 506 aaPredicted RBP22.54■■□□□ 1.2
LSM4-202ENST00000593564 PPP2R2CQ9Y2T4 447 aa22.54■■□□□ 1.2
LSM4-202ENST00000593564 NAALAD2Q9Y3Q0 740 aa22.54■■□□□ 1.2
LSM4-202ENST00000593564 CDH1P12830 882 aa22.53■■□□□ 1.2
LSM4-202ENST00000593564 PGAM1P18669 254 aa22.53■■□□□ 1.2
LSM4-202ENST00000593564 GRNP28799 593 aaKnown RBP22.53■■□□□ 1.2
LSM4-202ENST00000593564 CCZ1BP86790 482 aa22.53■■□□□ 1.2
LSM4-202ENST00000593564 CCZ1P86791 482 aaPredicted RBP22.53■■□□□ 1.2
LSM4-202ENST00000593564 RHAGQ02094 409 aa22.53■■□□□ 1.2
LSM4-202ENST00000593564 DHX9Q08211 1270 aaKnown RBP22.53■■□□□ 1.2
LSM4-202ENST00000593564 CRYMQ14894 314 aa22.53■■□□□ 1.2
LSM4-202ENST00000593564 ABRAXAS2Q15018 415 aa22.53■■□□□ 1.2
LSM4-202ENST00000593564 MEP1AQ16819 746 aa22.53■■□□□ 1.2
LSM4-202ENST00000593564 PAQR3Q6TCH7 311 aa22.53■■□□□ 1.2
LSM4-202ENST00000593564 BNC2Q6ZN30 1099 aaPredicted RBP22.53■■□□□ 1.2
LSM4-202ENST00000593564 MRGPRGQ86SM5 289 aa22.53■■□□□ 1.2
LSM4-202ENST00000593564 CRLF3Q8IUI8 442 aa22.53■■□□□ 1.2
LSM4-202ENST00000593564 MCEMP1Q8IX19 187 aa22.53■■□□□ 1.2
LSM4-202ENST00000593564 PPIL6Q8IXY8 311 aa22.53■■□□□ 1.2
LSM4-202ENST00000593564 MOCOSQ96EN8 888 aa22.53■■□□□ 1.2
LSM4-202ENST00000593564 NPAS2Q99743 824 aa22.53■■□□□ 1.2
LSM4-202ENST00000593564 HAUS8Q9BT25 410 aa22.53■■□□□ 1.2
LSM4-202ENST00000593564 SARGQ9BW04 601 aa22.53■■□□□ 1.2
LSM4-202ENST00000593564 LANCL2Q9NS86 450 aa22.53■■□□□ 1.2
LSM4-202ENST00000593564 JRKLQ9Y4A0 524 aa22.53■■□□□ 1.2
LSM4-202ENST00000593564 TTI1O43156 1089 aa22.52■■□□□ 1.2
LSM4-202ENST00000593564 SLC19A2O60779 497 aa22.52■■□□□ 1.2
LSM4-202ENST00000593564 NPPBP16860 134 aa22.52■■□□□ 1.2
LSM4-202ENST00000593564 CASP6P55212 293 aa22.52■■□□□ 1.2
LSM4-202ENST00000593564 HERC3Q15034 1050 aa22.52■■□□□ 1.2
LSM4-202ENST00000593564 NSDHLQ15738 373 aa22.52■■□□□ 1.2
LSM4-202ENST00000593564 PHKG1Q16816 387 aa22.52■■□□□ 1.2
LSM4-202ENST00000593564 SFT2D3Q587I9 215 aa22.52■■□□□ 1.2
LSM4-202ENST00000593564 PAPD4Q6PIY7 484 aaKnown RBP22.52■■□□□ 1.2
LSM4-202ENST00000593564 AFAP1L2Q8N4X5 818 aa22.52■■□□□ 1.2
LSM4-202ENST00000593564 ABHD11Q8NFV4 315 aa22.52■■□□□ 1.2
LSM4-202ENST00000593564 GABPB2Q8TAK5 448 aaPredicted RBP22.52■■□□□ 1.2
LSM4-202ENST00000593564 ALKBH8Q96BT7 664 aaKnown RBP22.52■■□□□ 1.2
LSM4-202ENST00000593564 PEX11GQ96HA9 241 aa22.52■■□□□ 1.2
LSM4-202ENST00000593564 SIGLEC12Q96PQ1 595 aa22.52■■□□□ 1.2
LSM4-202ENST00000593564 LPAR4Q99677 370 aa22.52■■□□□ 1.2
LSM4-202ENST00000593564 UTP23Q9BRU9 249 aaKnown RBP22.52■■□□□ 1.2
LSM4-202ENST00000593564 MAGEB17A8MXT2 336 aa22.51■■□□□ 1.19
LSM4-202ENST00000593564 WISP2O76076 250 aa22.51■■□□□ 1.19
LSM4-202ENST00000593564 HIST1H2AGP0C0S8 130 aaPredicted RBP22.51■■□□□ 1.19
LSM4-202ENST00000593564 HIST1H2ADP20671 130 aa22.51■■□□□ 1.19
LSM4-202ENST00000593564 GABRB3P28472 473 aa22.51■■□□□ 1.19
LSM4-202ENST00000593564 CD96P40200 585 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms