RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 TMEM30AQ9NV96 361 aa16.56■□□□□ 0.24
SMARCA4-215ENST00000590574 DUS2Q9NX74 493 aaKnown RBP16.56■□□□□ 0.24
SMARCA4-215ENST00000590574 ARNTLO00327 626 aa16.56■□□□□ 0.24
SMARCA4-215ENST00000590574 BCAS1O75363 584 aaPredicted RBP16.56■□□□□ 0.24
SMARCA4-215ENST00000590574 NCS1P62166 190 aa16.56■□□□□ 0.24
SMARCA4-215ENST00000590574 MEF2AQ02078 507 aaPredicted RBP16.56■□□□□ 0.24
SMARCA4-215ENST00000590574 SPRED1Q7Z699 444 aa16.56■□□□□ 0.24
SMARCA4-215ENST00000590574 EVPLQ92817 2033 aa16.56■□□□□ 0.24
SMARCA4-215ENST00000590574 TBC1D17Q9HA65 648 aa16.56■□□□□ 0.24
SMARCA4-215ENST00000590574 MOV10Q9HCE1 1003 aaKnown RBP16.56■□□□□ 0.24
SMARCA4-215ENST00000590574 ING3Q9NXR8 418 aa16.56■□□□□ 0.24
SMARCA4-215ENST00000590574 MAN2B2Q9Y2E5 1009 aa16.56■□□□□ 0.24
SMARCA4-215ENST00000590574 GRXCR2A6NFK2 248 aa16.56■□□□□ 0.24
SMARCA4-215ENST00000590574 AREL1O15033 823 aa16.56■□□□□ 0.24
SMARCA4-215ENST00000590574 GSRP00390 522 aa16.56■□□□□ 0.24
SMARCA4-215ENST00000590574 PRAMEF14Q5SWL7 426 aa16.56■□□□□ 0.24
SMARCA4-215ENST00000590574 LCN1P1Q5VSP4 162 aa16.56■□□□□ 0.24
SMARCA4-215ENST00000590574 PRAMEF13Q5VWM6 474 aa16.56■□□□□ 0.24
SMARCA4-215ENST00000590574 ZNF438Q7Z4V0 828 aa16.56■□□□□ 0.24
SMARCA4-215ENST00000590574 PCDHB11Q9Y5F2 797 aa16.56■□□□□ 0.24
SMARCA4-215ENST00000590574 PCDHGA8Q9Y5G5 932 aa16.56■□□□□ 0.24
SMARCA4-215ENST00000590574 SPIN1Q9Y657 262 aaPredicted RBP16.56■□□□□ 0.24
SMARCA4-215ENST00000590574 RETP07949 1114 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 FUT4P22083 530 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 PCSK6P29122 969 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 DDI2Q5TDH0 399 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 NADSYN1Q6IA69 706 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 SUSD1Q6UWL2 747 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 FAM43BQ6ZT52 329 aaPredicted RBP16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 CCDC80Q76M96 950 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 OTOP2Q7RTS6 562 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 FAM110BQ8TC76 370 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 TMEM203Q969S6 136 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 IGSF21Q96ID5 467 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 COQ7Q99807 217 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 UCK2Q9BZX2 261 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 CLEC4MQ9H2X3 399 aaPredicted RBP16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 ITM2CQ9NQX7 267 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 LEFTY2O00292 366 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 E2F3O00716 465 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 CHST10O43529 356 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 MPC1LP0DKB6 136 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 PTPN2P17706 415 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 OPRL1P41146 370 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 ETV3P41162 512 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 RGS8P57771 180 aaPredicted RBP16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 ZNF763Q0D2J5 394 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 ST3GAL4Q11206 333 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 ZNF630Q2M218 657 aaPredicted RBP16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 C11orf91Q3C1V1 193 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 PIWIL3Q7Z3Z3 882 aaKnown RBP16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 SLAIN1Q8ND83 568 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 MMP27Q9H306 513 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 IL26Q9NPH9 171 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 MALT1Q9UDY8 824 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 LSM1O15116 133 aaKnown RBP16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 PRMT3O60678 531 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 CDK5R2Q13319 367 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 KRT74Q7RTS7 529 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 CHPFQ8IZ52 775 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 TRPV1Q8NER1 839 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 SLC9A6Q92581 669 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 CXorf40BQ96DE9 158 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 YIPF4Q9BSR8 244 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 NECTIN3Q9NQS3 549 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 HCN4Q9Y3Q4 1203 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 SOD2P04179 222 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 EPHX1P07099 455 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 H1F0P07305 194 aaKnown RBP16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 MATN1P21941 496 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 FAM189BP81408 668 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 EXOC3L2Q2M3D2 409 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 TICAM1Q8IUC6 712 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 TEX26Q8N6G2 289 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 UXS1Q8NBZ7 420 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 NDNFQ8TB73 568 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 KLHL6Q8WZ60 621 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 REEP4Q9H6H4 257 aa16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 DCAF13Q9NV06 445 aaKnown RBP16.55■□□□□ 0.24
SMARCA4-215ENST00000590574 FUOMA2VDF0 154 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 RPS3P23396 243 aaKnown RBP eCLIP16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 BMXP51813 675 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 ZXDBP98169 803 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 APOFQ13790 326 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 ANGPT1Q15389 498 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 C5orf22Q49AR2 442 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 DPY19L3Q6ZPD9 716 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 ZNF513Q8N8E2 541 aaPredicted RBP16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 BRINP2Q9C0B6 783 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 GORASP2Q9H8Y8 452 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 KELP23276 732 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 SHMT2P34897 504 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 WASP42768 502 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 NCBP2P52298 156 aaKnown RBP eCLIP16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 KLHDC9Q8NEP7 349 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 PIGXQ8TBF5 258 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 UFD1Q92890 307 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 FAM129BQ96TA1 746 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 MARCH7Q9H992 704 aa16.54■□□□□ 0.24
SMARCA4-215ENST00000590574 TNFRSF12AQ9NP84 129 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms