RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 TMEM184CQ9NVA4 438 aa9.9□□□□□ -0.82
SDF2-208ENST00000589788 NINJ2Q9NZG7 142 aa9.9□□□□□ -0.82
SDF2-208ENST00000589788 IFT80Q9P2H3 777 aaPredicted RBP9.9□□□□□ -0.82
SDF2-208ENST00000589788 TCFL5Q9UL49 500 aa9.9□□□□□ -0.82
SDF2-208ENST00000589788 NBEAQ8NFP9 2946 aa9.9□□□□□ -0.82
SDF2-208ENST00000589788 MDC1Q14676 2089 aaKnown RBP9.9□□□□□ -0.82
SDF2-208ENST00000589788 CFAP47Q6ZTR5 3102 aa9.89□□□□□ -0.83
SDF2-208ENST00000589788 ELOA3CA0A087WX78 387 aaPredicted RBP9.89□□□□□ -0.83
SDF2-208ENST00000589788 ELOA3DA6NLF2 546 aaPredicted RBP9.89□□□□□ -0.83
SDF2-208ENST00000589788 TXNDC9O14530 226 aa9.89□□□□□ -0.83
SDF2-208ENST00000589788 HAT1O14929 419 aa9.89□□□□□ -0.83
SDF2-208ENST00000589788 RIPK2O43353 540 aa9.89□□□□□ -0.83
SDF2-208ENST00000589788 ACSL3O95573 720 aa9.89□□□□□ -0.83
SDF2-208ENST00000589788 C1QAP02745 245 aa9.89□□□□□ -0.83
SDF2-208ENST00000589788 ABHD2P08910 425 aa9.89□□□□□ -0.83
SDF2-208ENST00000589788 CELA3AP09093 270 aa9.89□□□□□ -0.83
SDF2-208ENST00000589788 FURINP09958 794 aa9.89□□□□□ -0.83
SDF2-208ENST00000589788 SFTPCP11686 197 aa9.89□□□□□ -0.83
SDF2-208ENST00000589788 GRK3P35626 688 aa9.89□□□□□ -0.83
SDF2-208ENST00000589788 HSD17B3P37058 310 aa9.89□□□□□ -0.83
SDF2-208ENST00000589788 RELAQ04206 551 aa9.89□□□□□ -0.83
SDF2-208ENST00000589788 SLC9A5Q14940 896 aa9.89□□□□□ -0.83
SDF2-208ENST00000589788 TSNQ15631 228 aaKnown RBP9.89□□□□□ -0.83
SDF2-208ENST00000589788 UGT8Q16880 541 aa9.89□□□□□ -0.83
SDF2-208ENST00000589788 MUM1Q2TAK8 710 aa9.89□□□□□ -0.83
SDF2-208ENST00000589788 ELOA3BQ3SY89 546 aa9.89□□□□□ -0.83
SDF2-208ENST00000589788 PCSK4Q6UW60 755 aa9.89□□□□□ -0.83
SDF2-208ENST00000589788 LCTLQ6UWM7 567 aa9.89□□□□□ -0.83
SDF2-208ENST00000589788 CSNK1A1LQ8N752 337 aa9.89□□□□□ -0.83
SDF2-208ENST00000589788 ELOA3Q8NG57 546 aa9.89□□□□□ -0.83
SDF2-208ENST00000589788 OR56A3Q8NH54 315 aa9.89□□□□□ -0.83
SDF2-208ENST00000589788 APOBEC4Q8WW27 367 aaKnown RBP9.89□□□□□ -0.83
SDF2-208ENST00000589788 THAP4Q8WY91 577 aa9.89□□□□□ -0.83
SDF2-208ENST00000589788 PYCR2Q96C36 320 aa9.89□□□□□ -0.83
SDF2-208ENST00000589788 CABS1Q96KC9 395 aa9.89□□□□□ -0.83
SDF2-208ENST00000589788 SGPP1Q9BX95 441 aa9.89□□□□□ -0.83
SDF2-208ENST00000589788 DERL2Q9GZP9 239 aa9.89□□□□□ -0.83
SDF2-208ENST00000589788 EPB41L4BQ9H329 900 aa9.89□□□□□ -0.83
SDF2-208ENST00000589788 FRRS1LQ9P0K9 344 aa9.89□□□□□ -0.83
SDF2-208ENST00000589788 IKZF3Q9UKT9 509 aa9.89□□□□□ -0.83
SDF2-208ENST00000589788 TRIM33Q9UPN9 1127 aa9.89□□□□□ -0.83
SDF2-208ENST00000589788 MAN2B2Q9Y2E5 1009 aa9.89□□□□□ -0.83
SDF2-208ENST00000589788 OARD1Q9Y530 152 aa9.89□□□□□ -0.83
SDF2-208ENST00000589788 IKBKGQ9Y6K9 419 aa9.89□□□□□ -0.83
SDF2-208ENST00000589788 FER1L5A0AVI2 2057 aa9.89□□□□□ -0.83
SDF2-208ENST00000589788 MGAQ8IWI9 3026 aa9.88□□□□□ -0.83
SDF2-208ENST00000589788 FITM1A5D6W6 292 aa9.88□□□□□ -0.83
SDF2-208ENST00000589788 CAPN1P07384 714 aa9.88□□□□□ -0.83
SDF2-208ENST00000589788 NUDT17P0C025 328 aa9.88□□□□□ -0.83
SDF2-208ENST00000589788 CDH1P12830 882 aa9.88□□□□□ -0.83
SDF2-208ENST00000589788 NPPBP16860 134 aa9.88□□□□□ -0.83
SDF2-208ENST00000589788 CRABP2P29373 138 aa9.88□□□□□ -0.83
SDF2-208ENST00000589788 FOLR3P41439 243 aa9.88□□□□□ -0.83
SDF2-208ENST00000589788 HNMTP50135 292 aa9.88□□□□□ -0.83
SDF2-208ENST00000589788 POLE2P56282 527 aa9.88□□□□□ -0.83
SDF2-208ENST00000589788 ATP6V0D1P61421 351 aa9.88□□□□□ -0.83
SDF2-208ENST00000589788 RPS15AP62244 130 aaKnown RBP9.88□□□□□ -0.83
SDF2-208ENST00000589788 CDKL1Q00532 357 aa9.88□□□□□ -0.83
SDF2-208ENST00000589788 NFKB2Q00653 900 aa9.88□□□□□ -0.83
SDF2-208ENST00000589788 IL10RAQ13651 578 aa9.88□□□□□ -0.83
SDF2-208ENST00000589788 CSHL1Q14406 222 aa9.88□□□□□ -0.83
SDF2-208ENST00000589788 CASP8Q14790 479 aa9.88□□□□□ -0.83
SDF2-208ENST00000589788 PPP1R3AQ16821 1122 aa9.88□□□□□ -0.83
SDF2-208ENST00000589788 UBAP2Q5T6F2 1119 aaKnown RBP9.88□□□□□ -0.83
SDF2-208ENST00000589788 LCE2CQ5TA81 110 aa9.88□□□□□ -0.83
SDF2-208ENST00000589788 MROH9Q5TGP6 573 aa9.88□□□□□ -0.83
SDF2-208ENST00000589788 HDXQ7Z353 690 aa9.88□□□□□ -0.83
SDF2-208ENST00000589788 TBC1D1Q86TI0 1168 aaPredicted RBP9.88□□□□□ -0.83
SDF2-208ENST00000589788 PLD3Q8IV08 490 aa9.88□□□□□ -0.83
SDF2-208ENST00000589788 SPATA6LQ8N4H0 392 aa9.88□□□□□ -0.83
SDF2-208ENST00000589788 TBC1D19Q8N5T2 526 aa9.88□□□□□ -0.83
SDF2-208ENST00000589788 METTL27Q8N6F8 245 aaPredicted RBP9.88□□□□□ -0.83
SDF2-208ENST00000589788 OR2A5Q96R48 311 aa9.88□□□□□ -0.83
SDF2-208ENST00000589788 FUT8Q9BYC5 575 aa9.88□□□□□ -0.83
SDF2-208ENST00000589788 UNKQ9C0B0 810 aaKnown RBP9.88□□□□□ -0.83
SDF2-208ENST00000589788 ADNPQ9H2P0 1102 aa9.88□□□□□ -0.83
SDF2-208ENST00000589788 ACSS3Q9H6R3 686 aa9.88□□□□□ -0.83
SDF2-208ENST00000589788 ENAMQ9NRM1 1142 aa9.88□□□□□ -0.83
SDF2-208ENST00000589788 SH2B3Q9UQQ2 575 aa9.88□□□□□ -0.83
SDF2-208ENST00000589788 PTRH2Q9Y3E5 179 aaKnown RBP9.88□□□□□ -0.83
SDF2-208ENST00000589788 CCDC88CQ9P219 2028 aa9.88□□□□□ -0.83
SDF2-208ENST00000589788 A0A087WUV0 522 aaPredicted RBP9.87□□□□□ -0.83
SDF2-208ENST00000589788 NCF1BA6NI72 391 aaPredicted RBP9.87□□□□□ -0.83
SDF2-208ENST00000589788 NCF1CA8MVU1 366 aaPredicted RBP9.87□□□□□ -0.83
SDF2-208ENST00000589788 PRPF4O43172 522 aaKnown RBP eCLIP9.87□□□□□ -0.83
SDF2-208ENST00000589788 SMNDC1O75940 238 aaKnown RBP eCLIP9.87□□□□□ -0.83
SDF2-208ENST00000589788 WISP3O95389 354 aaPredicted RBP9.87□□□□□ -0.83
SDF2-208ENST00000589788 S100BP04271 92 aaPredicted RBP9.87□□□□□ -0.83
SDF2-208ENST00000589788 PRB1P04280 392 aa9.87□□□□□ -0.83
SDF2-208ENST00000589788 NCF1P14598 390 aaPredicted RBP9.87□□□□□ -0.83
SDF2-208ENST00000589788 OTX2P32243 289 aa9.87□□□□□ -0.83
SDF2-208ENST00000589788 OR1D4P47884 311 aa9.87□□□□□ -0.83
SDF2-208ENST00000589788 CCR8P51685 355 aa9.87□□□□□ -0.83
SDF2-208ENST00000589788 CSNK1G2P78368 415 aa9.87□□□□□ -0.83
SDF2-208ENST00000589788 KCNAB2Q13303 367 aa9.87□□□□□ -0.83
SDF2-208ENST00000589788 BMPR2Q13873 1038 aa9.87□□□□□ -0.83
SDF2-208ENST00000589788 SLC29A2Q14542 456 aa9.87□□□□□ -0.83
SDF2-208ENST00000589788 ZKSCAN8Q15776 578 aaPredicted RBP9.87□□□□□ -0.83
SDF2-208ENST00000589788 NDUFA9Q16795 377 aa9.87□□□□□ -0.83
SDF2-208ENST00000589788 PRTGQ2VWP7 1150 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms