RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 PANK4Q9NVE7 773 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 SDAD1Q9NVU7 687 aaKnown RBP eCLIP1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 TMEM248Q9NWD8 314 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 HAO2Q9NYQ3 351 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 SEMA5BQ9P283 1151 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 LSM7Q9UK45 103 aaKnown RBP1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 BARX2Q9UMQ3 279 aaPredicted RBP1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 SNX6Q9UNH7 406 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 DTX4Q9Y2E6 619 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 TDRKHQ9Y2W6 561 aaKnown RBP1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 COQ4Q9Y3A0 265 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 HBS1LQ9Y450 684 aaKnown RBP1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 RIPK3Q9Y572 518 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 SEC23IPQ9Y6Y8 1000 aaKnown RBP1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 MIA3Q5JRA6 1907 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 MUC22E2RYF6 1773 aaPredicted RBP1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 CEP290O15078 2479 aa1.86□□□□□ -2.11
SMCHD1-211ENST00000584897 CHD9Q3L8U1 2897 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 A0A1W2PQM1 296 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 HTR3EA5X5Y0 456 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 ZSCAN5CA6NGD5 496 aaPredicted RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 FAM157AC9JC47 383 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 NOL4O94818 638 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 KAT7O95251 611 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 GLUD1P00367 558 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 INHBAP08476 426 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 SP9P0CG40 484 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 CA4P22748 312 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 PSMA3P25788 255 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 GABRA5P31644 462 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 RPL3P39023 403 aaKnown RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 RPS9P46781 194 aaKnown RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 NPBWR1P48145 328 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 TNNC1P63316 161 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 CNTN2Q02246 1040 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 MBTD1Q05BQ5 628 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 SLC20A2Q08357 652 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 PPP1R8Q12972 351 aaKnown RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 NPRL3Q12980 569 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 TMEM132DQ14C87 1099 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 ASTE1Q2TB18 679 aaPredicted RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 FUT11Q495W5 492 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 CFAP221Q4G0U5 840 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 ZNF628Q5EBL2 1059 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 CYP4A22Q5TCH4 519 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 IRAK1BP1Q5VVH5 260 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 ALS2CLQ60I27 953 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 TWF2Q6IBS0 349 aaKnown RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 NAPEPLDQ6IQ20 393 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 SLC8B1Q6J4K2 584 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 SASS6Q6UVJ0 657 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 KCTD9Q7L273 389 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 OTOAQ7RTW8 1153 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 ZNF720Q7Z2F6 126 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 SERPINA11Q86U17 422 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 FAM217AQ8IXS0 508 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 ZBTB2Q8N680 514 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 NHLRC2Q8NBF2 726 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 ZBTB44Q8NCP5 570 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 KIAA0895Q8NCT3 520 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 HUS1BQ8NHY5 278 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 SPATA20Q8TB22 786 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 KIAA1524Q8TCG1 905 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 HM13Q8TCT9 377 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 ROBO4Q8WZ75 1007 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 BICD1Q96G01 975 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 NSL1Q96IY1 281 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 KATNB1Q9BVA0 655 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 CNOT10Q9H9A5 744 aaKnown RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 TBC1D17Q9HA65 648 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 DUSP22Q9NRW4 184 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 NLKQ9UBE8 527 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 UTS2RQ9UKP6 389 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 FZD4Q9ULV1 537 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 CEPT1Q9Y6K0 416 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 PDCD11Q14690 1871 aaKnown RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 DCHS1Q96JQ0 3298 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 MYH7BA7E2Y1 1941 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 DOCK5Q9H7D0 1870 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 FAM86B1E9PN63 330 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 TMX2-CTNND1H3BSU7 103 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 CACNB4O00305 520 aaPredicted RBP1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 VCYO14598 125 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 LDLRAD4O15165 306 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 PSMD3O43242 534 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 SLC7A4O43246 635 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 HCRTR2O43614 444 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 SCGB2A1O75556 95 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 STBD1O95210 358 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 KCNK5O95279 499 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 PGK2P07205 417 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 FAM86B2P0C5J1 330 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 SELLP14151 372 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 ITIH1P19827 911 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 KCNA5P22460 613 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 MYF6P23409 242 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 OXTRP30559 389 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 PEX5P50542 639 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 ALDH3A2P51648 485 aa1.85□□□□□ -2.11
SMCHD1-211ENST00000584897 CDH13P55290 713 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms