RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 AFAP1L1Q8TED9 768 aa4.86□□□□□ -1.63
SMARCE1-219ENST00000583294 GATAD1Q8WUU5 269 aa4.86□□□□□ -1.63
SMARCE1-219ENST00000583294 ART5Q96L15 291 aa4.86□□□□□ -1.63
SMARCE1-219ENST00000583294 HNRNPABQ99729 332 aaKnown RBP4.86□□□□□ -1.63
SMARCE1-219ENST00000583294 ALKBH7Q9BT30 221 aaPredicted RBP4.86□□□□□ -1.63
SMARCE1-219ENST00000583294 DGCR6LQ9BY27 220 aa4.86□□□□□ -1.63
SMARCE1-219ENST00000583294 VPS33BQ9H267 617 aa4.86□□□□□ -1.63
SMARCE1-219ENST00000583294 TMEM206Q9H813 350 aa4.86□□□□□ -1.63
SMARCE1-219ENST00000583294 TUFT1Q9NNX1 390 aa4.86□□□□□ -1.63
SMARCE1-219ENST00000583294 PDRG1Q9NUG6 133 aa4.86□□□□□ -1.63
SMARCE1-219ENST00000583294 TMOD3Q9NYL9 352 aa4.86□□□□□ -1.63
SMARCE1-219ENST00000583294 HACD3Q9P035 362 aa4.86□□□□□ -1.63
SMARCE1-219ENST00000583294 TMEM181Q9P2C4 612 aa4.86□□□□□ -1.63
SMARCE1-219ENST00000583294 KLHL8Q9P2G9 620 aaPredicted RBP4.86□□□□□ -1.63
SMARCE1-219ENST00000583294 NOCTQ9UK39 431 aaKnown RBP4.86□□□□□ -1.63
SMARCE1-219ENST00000583294 NCKAP1Q9Y2A7 1128 aa4.86□□□□□ -1.63
SMARCE1-219ENST00000583294 NPIPA3F8WFD2 350 aa4.85□□□□□ -1.63
SMARCE1-219ENST00000583294 GOT1P17174 413 aa4.85□□□□□ -1.63
SMARCE1-219ENST00000583294 ITIH1P19827 911 aa4.85□□□□□ -1.63
SMARCE1-219ENST00000583294 ATP5DP30049 168 aa4.85□□□□□ -1.63
SMARCE1-219ENST00000583294 OR3A1P47881 315 aa4.85□□□□□ -1.63
SMARCE1-219ENST00000583294 DCDC1P59894 354 aa4.85□□□□□ -1.63
SMARCE1-219ENST00000583294 GPR141Q7Z602 305 aa4.85□□□□□ -1.63
SMARCE1-219ENST00000583294 PRSS35Q8N3Z0 413 aa4.85□□□□□ -1.63
SMARCE1-219ENST00000583294 FIBINQ8TAL6 211 aa4.85□□□□□ -1.63
SMARCE1-219ENST00000583294 MAPK15Q8TD08 544 aa4.85□□□□□ -1.63
SMARCE1-219ENST00000583294 UBLCP1Q8WVY7 318 aaPredicted RBP4.85□□□□□ -1.63
SMARCE1-219ENST00000583294 C2orf48Q96LS8 159 aa4.85□□□□□ -1.63
SMARCE1-219ENST00000583294 TSSK2Q96PF2 358 aa4.85□□□□□ -1.63
SMARCE1-219ENST00000583294 MMADHCQ9H3L0 296 aaPredicted RBP4.85□□□□□ -1.63
SMARCE1-219ENST00000583294 C10orf88Q9H8K7 445 aa4.85□□□□□ -1.63
SMARCE1-219ENST00000583294 IARS2Q9NSE4 1012 aaKnown RBP4.85□□□□□ -1.63
SMARCE1-219ENST00000583294 ARGLU1Q9NWB6 273 aaPredicted RBP4.85□□□□□ -1.63
SMARCE1-219ENST00000583294 IL36AQ9UHA7 158 aa4.85□□□□□ -1.63
SMARCE1-219ENST00000583294 ELF5Q9UKW6 265 aaPredicted RBP4.85□□□□□ -1.63
SMARCE1-219ENST00000583294 POMT2Q9UKY4 750 aa4.85□□□□□ -1.63
SMARCE1-219ENST00000583294 AGTPBP1Q9UPW5 1226 aa4.85□□□□□ -1.63
SMARCE1-219ENST00000583294 ILVBLA1L0T0 632 aa4.84□□□□□ -1.63
SMARCE1-219ENST00000583294 PI4K2BG5E9Z4 385 aa4.84□□□□□ -1.63
SMARCE1-219ENST00000583294 CCER2I3L3R5 266 aa4.84□□□□□ -1.63
SMARCE1-219ENST00000583294 RTCAO00442 366 aaKnown RBP4.84□□□□□ -1.63
SMARCE1-219ENST00000583294 KIF5CO60282 957 aa4.84□□□□□ -1.63
SMARCE1-219ENST00000583294 KRT33AO76009 404 aa4.84□□□□□ -1.63
SMARCE1-219ENST00000583294 YES1P07947 543 aa4.84□□□□□ -1.63
SMARCE1-219ENST00000583294 CYP2A7P20853 494 aa4.84□□□□□ -1.63
SMARCE1-219ENST00000583294 RBMS1P29558 406 aaKnown RBP4.84□□□□□ -1.63
SMARCE1-219ENST00000583294 OR3A2P47893 321 aa4.84□□□□□ -1.63
SMARCE1-219ENST00000583294 ABRQ12979 859 aa4.84□□□□□ -1.63
SMARCE1-219ENST00000583294 EFTUD2Q15029 972 aaKnown RBP eCLIP4.84□□□□□ -1.63
SMARCE1-219ENST00000583294 TYSND1Q2T9J0 566 aa4.84□□□□□ -1.63
SMARCE1-219ENST00000583294 FGD3Q5JSP0 725 aa4.84□□□□□ -1.63
SMARCE1-219ENST00000583294 ADAM5Q6NVV9 412 aa4.84□□□□□ -1.63
SMARCE1-219ENST00000583294 FIP1L1Q6UN15 594 aaKnown RBP4.84□□□□□ -1.63
SMARCE1-219ENST00000583294 LINC00696Q6ZRV3 163 aa4.84□□□□□ -1.63
SMARCE1-219ENST00000583294 CCDC170Q8IYT3 715 aa4.84□□□□□ -1.63
SMARCE1-219ENST00000583294 OR7G3Q8NG95 312 aa4.84□□□□□ -1.63
SMARCE1-219ENST00000583294 TEKT1Q969V4 418 aa4.84□□□□□ -1.63
SMARCE1-219ENST00000583294 SYT15Q9BQS2 421 aa4.84□□□□□ -1.63
SMARCE1-219ENST00000583294 ATG101Q9BSB4 218 aa4.84□□□□□ -1.63
SMARCE1-219ENST00000583294 UBQLN3Q9H347 655 aa4.84□□□□□ -1.63
SMARCE1-219ENST00000583294 SRD5A3Q9H8P0 318 aa4.84□□□□□ -1.63
SMARCE1-219ENST00000583294 RPF1Q9H9Y2 349 aaKnown RBP4.84□□□□□ -1.63
SMARCE1-219ENST00000583294 ABCB8Q9NUT2 735 aa4.84□□□□□ -1.63
SMARCE1-219ENST00000583294 PANK4Q9NVE7 773 aa4.84□□□□□ -1.63
SMARCE1-219ENST00000583294 MDFICQ9P1T7 246 aa4.84□□□□□ -1.63
SMARCE1-219ENST00000583294 C15orf61A6NNL5 157 aa4.83□□□□□ -1.64
SMARCE1-219ENST00000583294 A8MVM7 634 aa4.83□□□□□ -1.64
SMARCE1-219ENST00000583294 PGRMC2O15173 223 aa4.83□□□□□ -1.64
SMARCE1-219ENST00000583294 ACSL4O60488 711 aa4.83□□□□□ -1.64
SMARCE1-219ENST00000583294 CYTIPO60759 359 aa4.83□□□□□ -1.64
SMARCE1-219ENST00000583294 NXPH2O95156 264 aa4.83□□□□□ -1.64
SMARCE1-219ENST00000583294 DUS4LO95620 317 aaKnown RBP4.83□□□□□ -1.64
SMARCE1-219ENST00000583294 MT3P25713 68 aa4.83□□□□□ -1.64
SMARCE1-219ENST00000583294 MMP12P39900 470 aa4.83□□□□□ -1.64
SMARCE1-219ENST00000583294 OR1D5P58170 312 aa4.83□□□□□ -1.64
SMARCE1-219ENST00000583294 ST8SIA6P61647 398 aa4.83□□□□□ -1.64
SMARCE1-219ENST00000583294 DRP2Q13474 957 aa4.83□□□□□ -1.64
SMARCE1-219ENST00000583294 TRA2AQ13595 282 aaKnown RBP eCLIP4.83□□□□□ -1.64
SMARCE1-219ENST00000583294 MTF1Q14872 753 aa4.83□□□□□ -1.64
SMARCE1-219ENST00000583294 DUSP5Q16690 384 aa4.83□□□□□ -1.64
SMARCE1-219ENST00000583294 HLA-BQ31612 363 aa4.83□□□□□ -1.64
SMARCE1-219ENST00000583294 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.83□□□□□ -1.64
SMARCE1-219ENST00000583294 ZNF770Q6IQ21 691 aaPredicted RBP4.83□□□□□ -1.64
SMARCE1-219ENST00000583294 DHRS11Q6UWP2 260 aa4.83□□□□□ -1.64
SMARCE1-219ENST00000583294 Q6ZRP5 223 aa4.83□□□□□ -1.64
SMARCE1-219ENST00000583294 AQP12AQ8IXF9 295 aa4.83□□□□□ -1.64
SMARCE1-219ENST00000583294 ZNRF4Q8WWF5 429 aa4.83□□□□□ -1.64
SMARCE1-219ENST00000583294 TDRD1Q9BXT4 1180 aaKnown RBP4.83□□□□□ -1.64
SMARCE1-219ENST00000583294 NACAP1Q9BZK3 213 aa4.83□□□□□ -1.64
SMARCE1-219ENST00000583294 DPEP2Q9H4A9 486 aa4.83□□□□□ -1.64
SMARCE1-219ENST00000583294 C5orf66Q9H5L9 145 aa4.83□□□□□ -1.64
SMARCE1-219ENST00000583294 SPHK2Q9NRA0 654 aa4.83□□□□□ -1.64
SMARCE1-219ENST00000583294 TMEM161AQ9NX61 479 aa4.83□□□□□ -1.64
SMARCE1-219ENST00000583294 SLCO1C1Q9NYB5 712 aa4.83□□□□□ -1.64
SMARCE1-219ENST00000583294 PILRBQ9UKJ0 227 aa4.83□□□□□ -1.64
SMARCE1-219ENST00000583294 PA2G4Q9UQ80 394 aaKnown RBP4.83□□□□□ -1.64
SMARCE1-219ENST00000583294 PCDHGA1Q9Y5H4 931 aa4.83□□□□□ -1.64
SMARCE1-219ENST00000583294 SELENOKQ9Y6D0 94 aa4.83□□□□□ -1.64
SMARCE1-219ENST00000583294 KIAA1217Q5T5P2 1943 aa4.82□□□□□ -1.64
SMARCE1-219ENST00000583294 A0A0B4J203 849 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms