RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 ERI2A8K979 691 aaKnown RBP4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 E5RGE8 158 aa4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 TEX28O15482 410 aa4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 ZG16O60844 167 aa4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 SEC24AO95486 1093 aa4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 PRKAR1AP10644 381 aa4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 GOT1P17174 413 aa4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 FRKP42685 505 aaPredicted RBP4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 LEPRP48357 1165 aaKnown RBP4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 KRTAP10-5P60370 271 aa4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 C17orf67Q0P5P2 114 aa4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 CCDC6Q16204 474 aa4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 KBTBD12Q3ZCT8 623 aa4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 ZNF772Q68DY9 489 aaPredicted RBP4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 KCTD9Q7L273 389 aa4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 FCRLAQ7L513 359 aa4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 PRUNE1Q86TP1 453 aa4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 AQP12AQ8IXF9 295 aa4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 RAB42Q8N4Z0 105 aa4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 DCLK2Q8N568 766 aa4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 ZNF713Q8N859 430 aaPredicted RBP4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 AMER3Q8N944 861 aa4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 DDHD1Q8NEL9 900 aa4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 OR5AP2Q8NGF4 316 aa4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 OR10G8Q8NGN5 311 aa4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 LRR1Q96L50 414 aa4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 TSSK2Q96PF2 358 aa4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 FUCA2Q9BTY2 467 aa4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 ZNF350Q9GZX5 532 aa4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 UBQLN3Q9H347 655 aa4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 ZNF696Q9H7X3 374 aa4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 IL1RAPL2Q9NP60 686 aa4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 IARS2Q9NSE4 1012 aaKnown RBP4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 MAN2C1Q9NTJ4 1040 aa4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 TBC1D13Q9NVG8 400 aa4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 IL36AQ9UHA7 158 aa4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 SLC12A6Q9UHW9 1150 aa4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 NCKAP1Q9Y2A7 1128 aa4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 WDR37Q9Y2I8 494 aa4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 MRPS28Q9Y2Q9 187 aaKnown RBP4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 NSG2Q9Y328 171 aa4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 KIAA1217Q5T5P2 1943 aa4.11□□□□□ -1.75
SMCHD1-205ENST00000581383 A0A087WUV0 522 aaPredicted RBP4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 A0A0B4J203 849 aa4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 SMIM30A4D0T7 59 aa4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 ACSL4O60488 711 aa4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 RAD51DO75771 328 aa4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 GOSR1O95249 250 aa4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 VTNP04004 478 aa4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 YES1P07947 543 aa4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 CEBPBP17676 345 aa4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 RPL35AP18077 110 aaKnown RBP4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 ELAVL4P26378 380 aaKnown RBP4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 TAF6P49848 677 aa4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 SNU13P55769 128 aaKnown RBP4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 SNRPD1P62314 119 aaKnown RBP4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 SGCGQ13326 291 aa4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 TMEM132DQ14C87 1099 aa4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 PTPN14Q15678 1187 aa4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 ODF2Q5BJF6 829 aa4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 ZNF770Q6IQ21 691 aaPredicted RBP4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 BHLHB9Q6PI77 547 aa4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 Q6ZSR9 355 aa4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 C5orf24Q7Z6I8 188 aa4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 HOGA1Q86XE5 327 aa4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 CCDC83Q8IWF9 413 aa4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 UNC45BQ8IWX7 931 aa4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 LSMEM2Q8N112 164 aa4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 GPC2Q8N158 579 aa4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 PRSS35Q8N3Z0 413 aa4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 FAM89BQ8N5H3 189 aa4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 C10orf53Q8N6V4 93 aa4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 SMAP2Q8WU79 429 aaPredicted RBP4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 AZIN2Q96A70 460 aa4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 SNRNP40Q96DI7 357 aaKnown RBP4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 LGALS12Q96DT0 336 aa4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 GMPPAQ96IJ6 420 aaPredicted RBP4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 MAGED4Q96JG8 741 aa4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 NEDD4LQ96PU5 975 aa4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 LITAFQ99732 161 aa4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 ZNF559Q9BR84 538 aa4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 CUEDC2Q9H467 287 aa4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 RPF1Q9H9Y2 349 aaKnown RBP4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 RNF186Q9NXI6 227 aa4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 TMOD3Q9NYL9 352 aa4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 PYGO1Q9Y3Y4 419 aa4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 ANGPTL3Q9Y5C1 460 aa4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 COLEC10Q9Y6Z7 277 aa4.1□□□□□ -1.75
SMCHD1-205ENST00000581383 A0A0A6YYC8 382 aaPredicted RBP4.09□□□□□ -1.75
SMCHD1-205ENST00000581383 I3L1I5 382 aaPredicted RBP4.09□□□□□ -1.75
SMCHD1-205ENST00000581383 PGRMC2O15173 223 aa4.09□□□□□ -1.75
SMCHD1-205ENST00000581383 TTI1O43156 1089 aa4.09□□□□□ -1.75
SMCHD1-205ENST00000581383 KIF5CO60282 957 aa4.09□□□□□ -1.75
SMCHD1-205ENST00000581383 ATP9AO75110 1047 aa4.09□□□□□ -1.75
SMCHD1-205ENST00000581383 KHDRBS3O75525 346 aaKnown RBP4.09□□□□□ -1.75
SMCHD1-205ENST00000581383 RNF224P0DH78 156 aa4.09□□□□□ -1.75
SMCHD1-205ENST00000581383 C8orf89P0DMQ9 161 aa4.09□□□□□ -1.75
SMCHD1-205ENST00000581383 RBMS1P29558 406 aaKnown RBP4.09□□□□□ -1.75
SMCHD1-205ENST00000581383 SERPINB6P35237 376 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms