RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 ELP5Q8TE02 316 aa12.99□□□□□ -0.33
CSNK1D-211ENST00000579316 P3H4Q92791 437 aa12.99□□□□□ -0.33
CSNK1D-211ENST00000579316 TMEM125Q96AQ2 219 aa12.99□□□□□ -0.33
CSNK1D-211ENST00000579316 RAD51AP1Q96B01 352 aa12.99□□□□□ -0.33
CSNK1D-211ENST00000579316 OR2A5Q96R48 311 aa12.99□□□□□ -0.33
CSNK1D-211ENST00000579316 PLCD4Q9BRC7 762 aa12.99□□□□□ -0.33
CSNK1D-211ENST00000579316 CDCP1Q9H5V8 836 aa12.99□□□□□ -0.33
CSNK1D-211ENST00000579316 PLEKHF2Q9H8W4 249 aa12.99□□□□□ -0.33
CSNK1D-211ENST00000579316 Q9UFV3 132 aa12.99□□□□□ -0.33
CSNK1D-211ENST00000579316 FAM215AQ9Y5M1 114 aa12.99□□□□□ -0.33
CSNK1D-211ENST00000579316 INAFM1C9JVW0 142 aa12.98□□□□□ -0.33
CSNK1D-211ENST00000579316 F8W8V4 182 aa12.98□□□□□ -0.33
CSNK1D-211ENST00000579316 KLRC4-KLRK1H3BQV0 150 aa12.98□□□□□ -0.33
CSNK1D-211ENST00000579316 SYT5O00445 386 aa12.98□□□□□ -0.33
CSNK1D-211ENST00000579316 TXNDC9O14530 226 aa12.98□□□□□ -0.33
CSNK1D-211ENST00000579316 CMPK1P30085 196 aa12.98□□□□□ -0.33
CSNK1D-211ENST00000579316 RFC3P40938 356 aa12.98□□□□□ -0.33
CSNK1D-211ENST00000579316 DCAF7P61962 342 aa12.98□□□□□ -0.33
CSNK1D-211ENST00000579316 NKX6-1P78426 367 aaPredicted RBP12.98□□□□□ -0.33
CSNK1D-211ENST00000579316 RELAQ04206 551 aa12.98□□□□□ -0.33
CSNK1D-211ENST00000579316 USP10Q14694 798 aaKnown RBP12.98□□□□□ -0.33
CSNK1D-211ENST00000579316 GXYLT1Q4G148 440 aa12.98□□□□□ -0.33
CSNK1D-211ENST00000579316 ARMC10Q8N2F6 343 aa12.98□□□□□ -0.33
CSNK1D-211ENST00000579316 RAB42Q8N4Z0 105 aa12.98□□□□□ -0.33
CSNK1D-211ENST00000579316 TRIM58Q8NG06 486 aa12.98□□□□□ -0.33
CSNK1D-211ENST00000579316 OR10Q1Q8NGQ4 319 aa12.98□□□□□ -0.33
CSNK1D-211ENST00000579316 LPAR4Q99677 370 aa12.98□□□□□ -0.33
CSNK1D-211ENST00000579316 PNPLA3Q9NST1 481 aa12.98□□□□□ -0.33
CSNK1D-211ENST00000579316 CAPN6Q9Y6Q1 641 aa12.98□□□□□ -0.33
CSNK1D-211ENST00000579316 MPDZO75970 2070 aa12.97□□□□□ -0.33
CSNK1D-211ENST00000579316 IGKV1-8A0A0C4DH67 115 aa12.97□□□□□ -0.33
CSNK1D-211ENST00000579316 PEX1O43933 1283 aa12.97□□□□□ -0.33
CSNK1D-211ENST00000579316 OR1I1O60431 355 aa12.97□□□□□ -0.33
CSNK1D-211ENST00000579316 FTCDO95954 541 aa12.97□□□□□ -0.33
CSNK1D-211ENST00000579316 CD53P19397 219 aa12.97□□□□□ -0.33
CSNK1D-211ENST00000579316 PSMB4P28070 264 aa12.97□□□□□ -0.33
CSNK1D-211ENST00000579316 FOXN2P32314 431 aa12.97□□□□□ -0.33
CSNK1D-211ENST00000579316 AVPR1BP47901 424 aa12.97□□□□□ -0.33
CSNK1D-211ENST00000579316 MARCKSL1P49006 195 aa12.97□□□□□ -0.33
CSNK1D-211ENST00000579316 ITGA8P53708 1063 aa12.97□□□□□ -0.33
CSNK1D-211ENST00000579316 MLF1P58340 268 aa12.97□□□□□ -0.33
CSNK1D-211ENST00000579316 SLC26A5P58743 744 aa12.97□□□□□ -0.33
CSNK1D-211ENST00000579316 SNRPNP63162 240 aaKnown RBP12.97□□□□□ -0.33
CSNK1D-211ENST00000579316 PPP2R2BQ00005 443 aa12.97□□□□□ -0.33
CSNK1D-211ENST00000579316 SNTB1Q13884 538 aaKnown RBP12.97□□□□□ -0.33
CSNK1D-211ENST00000579316 SFT2D3Q587I9 215 aa12.97□□□□□ -0.33
CSNK1D-211ENST00000579316 RTL6Q6ICC9 239 aa12.97□□□□□ -0.33
CSNK1D-211ENST00000579316 TTC23LQ6PF05 361 aa12.97□□□□□ -0.33
CSNK1D-211ENST00000579316 B3GNT6Q6ZMB0 384 aa12.97□□□□□ -0.33
CSNK1D-211ENST00000579316 KLHDC8BQ8IXV7 354 aa12.97□□□□□ -0.33
CSNK1D-211ENST00000579316 SHISA5Q8N114 240 aa12.97□□□□□ -0.33
CSNK1D-211ENST00000579316 CIARTQ8N365 385 aaPredicted RBP12.97□□□□□ -0.33
CSNK1D-211ENST00000579316 OR52N2Q8NGI0 321 aa12.97□□□□□ -0.33
CSNK1D-211ENST00000579316 STYXQ8WUJ0 223 aa12.97□□□□□ -0.33
CSNK1D-211ENST00000579316 KRT35Q92764 455 aa12.97□□□□□ -0.33
CSNK1D-211ENST00000579316 RERGQ96A58 199 aaPredicted RBP12.97□□□□□ -0.33
CSNK1D-211ENST00000579316 TBL1YQ9BQ87 522 aa12.97□□□□□ -0.33
CSNK1D-211ENST00000579316 SPATA7Q9P0W8 599 aa12.97□□□□□ -0.33
CSNK1D-211ENST00000579316 MRFAP1Q9Y605 127 aa12.97□□□□□ -0.33
CSNK1D-211ENST00000579316 hCG_1818297A0A087WSY0 165 aa12.96□□□□□ -0.33
CSNK1D-211ENST00000579316 OR14I1A6ND48 311 aa12.96□□□□□ -0.33
CSNK1D-211ENST00000579316 OR2W5A6NFC9 320 aa12.96□□□□□ -0.33
CSNK1D-211ENST00000579316 FIGNL2A6NMB9 653 aa12.96□□□□□ -0.33
CSNK1D-211ENST00000579316 ARHGEF33A8MVX0 844 aa12.96□□□□□ -0.33
CSNK1D-211ENST00000579316 BCKDKO14874 412 aa12.96□□□□□ -0.33
CSNK1D-211ENST00000579316 P2RX6O15547 441 aa12.96□□□□□ -0.33
CSNK1D-211ENST00000579316 NSA2O95478 260 aaKnown RBP12.96□□□□□ -0.33
CSNK1D-211ENST00000579316 C1orf105O95561 183 aa12.96□□□□□ -0.33
CSNK1D-211ENST00000579316 APOA4P06727 396 aa12.96□□□□□ -0.33
CSNK1D-211ENST00000579316 PKMP14618 531 aaKnown RBP12.96□□□□□ -0.33
CSNK1D-211ENST00000579316 EZRP15311 586 aaKnown RBP12.96□□□□□ -0.33
CSNK1D-211ENST00000579316 MSNP26038 577 aaKnown RBP12.96□□□□□ -0.33
CSNK1D-211ENST00000579316 AOAHP28039 575 aa12.96□□□□□ -0.33
CSNK1D-211ENST00000579316 ADH7P40394 386 aa12.96□□□□□ -0.33
CSNK1D-211ENST00000579316 XCR1P46094 333 aa12.96□□□□□ -0.33
CSNK1D-211ENST00000579316 NR0B1P51843 470 aaKnown RBP12.96□□□□□ -0.33
CSNK1D-211ENST00000579316 PCBP2Q15366 365 aaKnown RBP eCLIP12.96□□□□□ -0.333e-8■■■■■ 30
CSNK1D-211ENST00000579316 NDUFA9Q16795 377 aa12.96□□□□□ -0.33
CSNK1D-211ENST00000579316 CCSMST1Q4G0I0 132 aa12.96□□□□□ -0.33
CSNK1D-211ENST00000579316 MFSD4BQ5TF39 518 aa12.96□□□□□ -0.33
CSNK1D-211ENST00000579316 CCDC181Q5TID7 509 aa12.96□□□□□ -0.33
CSNK1D-211ENST00000579316 KAZNQ674X7 775 aa12.96□□□□□ -0.33
CSNK1D-211ENST00000579316 ZNF425Q6IV72 752 aa12.96□□□□□ -0.33
CSNK1D-211ENST00000579316 PAOXQ6QHF9 649 aa12.96□□□□□ -0.33
CSNK1D-211ENST00000579316 CXorf67Q86X51 503 aaPredicted RBP12.96□□□□□ -0.33
CSNK1D-211ENST00000579316 PLPP5Q8NEB5 264 aa12.96□□□□□ -0.33
CSNK1D-211ENST00000579316 OR9A4Q8NGU2 314 aa12.96□□□□□ -0.33
CSNK1D-211ENST00000579316 LKAAEAR1Q8TD35 194 aa12.96□□□□□ -0.33
CSNK1D-211ENST00000579316 CREB3L4Q8TEY5 395 aa12.96□□□□□ -0.33
CSNK1D-211ENST00000579316 SPATA13Q96N96 652 aa12.96□□□□□ -0.33
CSNK1D-211ENST00000579316 PPP1R2P1Q96PQ5 205 aa12.96□□□□□ -0.33
CSNK1D-211ENST00000579316 CARD6Q9BX69 1037 aa12.96□□□□□ -0.33
CSNK1D-211ENST00000579316 TSSK1BQ9BXA7 367 aa12.96□□□□□ -0.33
CSNK1D-211ENST00000579316 KCNF1Q9H3M0 494 aa12.96□□□□□ -0.33
CSNK1D-211ENST00000579316 B4GALT7Q9UBV7 327 aa12.96□□□□□ -0.33
CSNK1D-211ENST00000579316 EFR3BQ9Y2G0 817 aa12.96□□□□□ -0.33
CSNK1D-211ENST00000579316 GOLGA6L9A6NEM1 432 aa12.95□□□□□ -0.34
CSNK1D-211ENST00000579316 MROH6A6NGR9 719 aa12.95□□□□□ -0.34
CSNK1D-211ENST00000579316 FAM47E-STBD1D6RA91 191 aa12.95□□□□□ -0.34
CSNK1D-211ENST00000579316 NPIPA2E9PIF3 369 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms