RNA–Protein interactions for RNA: ENST00000576377.1

SLC12A4-216, Transcript of solute carrier family 12 member 4, humanhuman

TSL 5

Gene SLC12A4, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-216ENST00000576377 ITGA9Q13797 1035 aa13.37□□□□□ -0.27
SLC12A4-216ENST00000576377 CDKAL1Q5VV42 579 aa13.37□□□□□ -0.27
SLC12A4-216ENST00000576377 DNAJC24Q6P3W2 148 aa13.37□□□□□ -0.27
SLC12A4-216ENST00000576377 TBC1D21Q8IYX1 336 aa13.37□□□□□ -0.27
SLC12A4-216ENST00000576377 ARHGEF39Q8N4T4 335 aa13.37□□□□□ -0.27
SLC12A4-216ENST00000576377 TMEM156Q8N614 296 aa13.37□□□□□ -0.27
SLC12A4-216ENST00000576377 ENOX1Q8TC92 643 aaKnown RBP13.37□□□□□ -0.27
SLC12A4-216ENST00000576377 TRMT61AQ96FX7 289 aaKnown RBP13.37□□□□□ -0.27
SLC12A4-216ENST00000576377 IL17FQ96PD4 163 aa13.37□□□□□ -0.27
SLC12A4-216ENST00000576377 CSPG4P5Q96PW8 444 aa13.37□□□□□ -0.27
SLC12A4-216ENST00000576377 AGPAT1Q99943 283 aa13.37□□□□□ -0.27
SLC12A4-216ENST00000576377 ZWILCHQ9H900 591 aa13.37□□□□□ -0.27
SLC12A4-216ENST00000576377 KCNS2Q9ULS6 477 aa13.37□□□□□ -0.27
SLC12A4-216ENST00000576377 ALPK2Q86TB3 2170 aa13.37□□□□□ -0.27
SLC12A4-216ENST00000576377 H0YGG7 62 aa13.36□□□□□ -0.27
SLC12A4-216ENST00000576377 MFSD11O43934 449 aa13.36□□□□□ -0.27
SLC12A4-216ENST00000576377 HCN1O60741 890 aa13.36□□□□□ -0.27
SLC12A4-216ENST00000576377 ERN1O75460 977 aaKnown RBP13.36□□□□□ -0.27
SLC12A4-216ENST00000576377 IL18BPO95998 194 aa13.36□□□□□ -0.27
SLC12A4-216ENST00000576377 THBS1P07996 1170 aa13.36□□□□□ -0.27
SLC12A4-216ENST00000576377 HNF1AP20823 631 aa13.36□□□□□ -0.27
SLC12A4-216ENST00000576377 ACADLP28330 430 aa13.36□□□□□ -0.27
SLC12A4-216ENST00000576377 MTTPP55157 894 aa13.36□□□□□ -0.27
SLC12A4-216ENST00000576377 ARF3P61204 181 aaPredicted RBP13.36□□□□□ -0.27
SLC12A4-216ENST00000576377 LOXL1Q08397 574 aaPredicted RBP13.36□□□□□ -0.27
SLC12A4-216ENST00000576377 FOXF2Q12947 444 aa13.36□□□□□ -0.27
SLC12A4-216ENST00000576377 SLC10A1Q14973 349 aa13.36□□□□□ -0.27
SLC12A4-216ENST00000576377 SF1Q15637 639 aaKnown RBP13.36□□□□□ -0.27
SLC12A4-216ENST00000576377 LRRC8BQ6P9F7 803 aa13.36□□□□□ -0.27
SLC12A4-216ENST00000576377 ZNF704Q6ZNC4 412 aaPredicted RBP13.36□□□□□ -0.27
SLC12A4-216ENST00000576377 POLNQ7Z5Q5 900 aa13.36□□□□□ -0.27
SLC12A4-216ENST00000576377 MCOLN2Q8IZK6 566 aa13.36□□□□□ -0.27
SLC12A4-216ENST00000576377 ARMC10Q8N2F6 343 aa13.36□□□□□ -0.27
SLC12A4-216ENST00000576377 ZNF611Q8N823 705 aa13.36□□□□□ -0.27
SLC12A4-216ENST00000576377 OR5K2Q8NHB8 316 aa13.36□□□□□ -0.27
SLC12A4-216ENST00000576377 ZFAND2BQ8WV99 257 aa13.36□□□□□ -0.27
SLC12A4-216ENST00000576377 HSPBAP1Q96EW2 488 aa13.36□□□□□ -0.27
SLC12A4-216ENST00000576377 PKP2Q99959 881 aa13.36□□□□□ -0.27
SLC12A4-216ENST00000576377 IL1RL2Q9HB29 575 aa13.36□□□□□ -0.27
SLC12A4-216ENST00000576377 AMACRQ9UHK6 382 aa13.36□□□□□ -0.27
SLC12A4-216ENST00000576377 POLG2Q9UHN1 485 aa13.36□□□□□ -0.27
SLC12A4-216ENST00000576377 PCDHGB3Q9Y5G1 929 aa13.36□□□□□ -0.27
SLC12A4-216ENST00000576377 FAM234BA2RU67 622 aa13.35□□□□□ -0.27
SLC12A4-216ENST00000576377 ANKRD62A6NC57 917 aa13.35□□□□□ -0.27
SLC12A4-216ENST00000576377 TGFBR3LH3BV60 316 aa13.35□□□□□ -0.27
SLC12A4-216ENST00000576377 HS3ST1O14792 307 aa13.35□□□□□ -0.27
SLC12A4-216ENST00000576377 CALB1P05937 261 aa13.35□□□□□ -0.27
SLC12A4-216ENST00000576377 CCDC166P0CW27 439 aa13.35□□□□□ -0.27
SLC12A4-216ENST00000576377 PSMB5P28074 263 aa13.35□□□□□ -0.27
SLC12A4-216ENST00000576377 CCKARP32238 428 aa13.35□□□□□ -0.27
SLC12A4-216ENST00000576377 CPOXP36551 454 aa13.35□□□□□ -0.27
SLC12A4-216ENST00000576377 ARL4AP40617 200 aa13.35□□□□□ -0.27
SLC12A4-216ENST00000576377 EMP3P54852 163 aa13.35□□□□□ -0.27
SLC12A4-216ENST00000576377 PTPRCAPQ14761 206 aa13.35□□□□□ -0.27
SLC12A4-216ENST00000576377 ABRAXAS2Q15018 415 aa13.35□□□□□ -0.27
SLC12A4-216ENST00000576377 NTNG2Q96CW9 530 aa13.35□□□□□ -0.27
SLC12A4-216ENST00000576377 MED18Q9BUE0 208 aa13.35□□□□□ -0.27
SLC12A4-216ENST00000576377 DRC3Q9H069 523 aa13.35□□□□□ -0.27
SLC12A4-216ENST00000576377 SLC6A15Q9H2J7 730 aa13.35□□□□□ -0.27
SLC12A4-216ENST00000576377 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.35□□□□□ -0.27
SLC12A4-216ENST00000576377 GDF2Q9UK05 429 aaPredicted RBP13.35□□□□□ -0.27
SLC12A4-216ENST00000576377 SCINQ9Y6U3 715 aa13.35□□□□□ -0.27
SLC12A4-216ENST00000576377 HYDINQ4G0P3 5121 aa13.35□□□□□ -0.27
SLC12A4-216ENST00000576377 RYR2Q92736 4967 aa13.35□□□□□ -0.27
SLC12A4-216ENST00000576377 A0A0U1RQJ8 604 aa13.34□□□□□ -0.27
SLC12A4-216ENST00000576377 LOC100653049A0A140TA62 436 aa13.34□□□□□ -0.27
SLC12A4-216ENST00000576377 TARM1B6A8C7 271 aa13.34□□□□□ -0.27
SLC12A4-216ENST00000576377 KRT34O76011 436 aa13.34□□□□□ -0.27
SLC12A4-216ENST00000576377 MIPP30301 263 aa13.34□□□□□ -0.27
SLC12A4-216ENST00000576377 SERPINB6P35237 376 aa13.34□□□□□ -0.27
SLC12A4-216ENST00000576377 FAM27E3Q08E93 113 aa13.34□□□□□ -0.27
SLC12A4-216ENST00000576377 RPA4Q13156 261 aa13.34□□□□□ -0.27
SLC12A4-216ENST00000576377 AWAT1Q58HT5 328 aa13.34□□□□□ -0.27
SLC12A4-216ENST00000576377 NSUN5P2Q63ZY6 315 aa13.34□□□□□ -0.27
SLC12A4-216ENST00000576377 GK5Q6ZS86 529 aa13.34□□□□□ -0.27
SLC12A4-216ENST00000576377 ZNF550Q7Z398 422 aa13.34□□□□□ -0.27
SLC12A4-216ENST00000576377 IRF2BP2Q7Z5L9 587 aa13.34□□□□□ -0.27
SLC12A4-216ENST00000576377 CSNK1A1LQ8N752 337 aa13.34□□□□□ -0.27
SLC12A4-216ENST00000576377 ZNF398Q8TD17 642 aa13.34□□□□□ -0.27
SLC12A4-216ENST00000576377 ZUFSPQ96AP4 578 aa13.34□□□□□ -0.27
SLC12A4-216ENST00000576377 ZC3HAV1LQ96H79 300 aaKnown RBP13.34□□□□□ -0.27
SLC12A4-216ENST00000576377 QRFPRQ96P65 431 aa13.34□□□□□ -0.27
SLC12A4-216ENST00000576377 RHNO1Q9BSD3 238 aa13.34□□□□□ -0.27
SLC12A4-216ENST00000576377 RBCK1Q9BYM8 510 aa13.34□□□□□ -0.27
SLC12A4-216ENST00000576377 SEMA4BQ9NPR2 832 aaPredicted RBP13.34□□□□□ -0.27
SLC12A4-216ENST00000576377 ZFATQ9P243 1243 aa13.34□□□□□ -0.27
SLC12A4-216ENST00000576377 WBP11Q9Y2W2 641 aaKnown RBP13.34□□□□□ -0.27
SLC12A4-216ENST00000576377 CADP27708 2225 aa13.33□□□□□ -0.27
SLC12A4-216ENST00000576377 FREM3P0C091 2139 aa13.33□□□□□ -0.28
SLC12A4-216ENST00000576377 MBD3L3A6NE82 208 aaPredicted RBP13.33□□□□□ -0.28
SLC12A4-216ENST00000576377 TMCO5BA8MYB1 307 aa13.33□□□□□ -0.28
SLC12A4-216ENST00000576377 AHRRA9YTQ3 701 aa13.33□□□□□ -0.28
SLC12A4-216ENST00000576377 OR10H2O60403 315 aa13.33□□□□□ -0.28
SLC12A4-216ENST00000576377 SHOX2O60902 331 aaPredicted RBP13.33□□□□□ -0.28
SLC12A4-216ENST00000576377 AP2A1O95782 977 aa13.33□□□□□ -0.28
SLC12A4-216ENST00000576377 S1PR4O95977 384 aa13.33□□□□□ -0.28
SLC12A4-216ENST00000576377 PSMA2P25787 234 aa13.33□□□□□ -0.28
SLC12A4-216ENST00000576377 PCK1P35558 622 aa13.33□□□□□ -0.28
SLC12A4-216ENST00000576377 XCR1P46094 333 aa13.33□□□□□ -0.28
SLC12A4-216ENST00000576377 ZNF135P52742 658 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms