RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 VPS35Q96QK1 796 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 ZNF300Q96RE9 604 aaPredicted RBP8.62□□□□□ -1.03
NCBP3-204ENST00000574911 RHNO1Q9BSD3 238 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 GABARAPL3Q9BY60 117 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 CCNB1IP1Q9NPC3 277 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 ACOT13Q9NPJ3 140 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 ASAH2Q9NR71 780 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 EXO1Q9UQ84 846 aaKnown RBP8.62□□□□□ -1.03
NCBP3-204ENST00000574911 PADI2Q9Y2J8 665 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 LTBP2Q14767 1821 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 ABHD14A-ACY1A0A1B0GW23 586 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 SUV39H1O43463 412 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 WBP4O75554 376 aaKnown RBP8.62□□□□□ -1.03
NCBP3-204ENST00000574911 CATP04040 527 aaKnown RBP8.62□□□□□ -1.03
NCBP3-204ENST00000574911 KRT20P35900 424 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 RECQLP46063 649 aaPredicted RBP8.62□□□□□ -1.03
NCBP3-204ENST00000574911 PRLHRP49683 370 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 ATP1A4Q13733 1029 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 DEFB115Q30KQ5 88 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 PROX2Q3B8N5 592 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 SPIN4Q56A73 249 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 DPPA4Q7L190 304 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 LILRA3Q8N6C8 439 aaPredicted RBP8.62□□□□□ -1.03
NCBP3-204ENST00000574911 TMCO5AQ8N6Q1 288 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 VPS37AQ8NEZ2 397 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 HUS1BQ8NHY5 278 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 NDNFQ8TB73 568 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 UBE2FQ969M7 185 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 TMEM159Q96B96 161 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 TPD52L3Q96J77 140 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 CCM2Q9BSQ5 444 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 DOHHQ9BU89 302 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 WDR12Q9GZL7 423 aaKnown RBP8.62□□□□□ -1.03
NCBP3-204ENST00000574911 ADPRHL2Q9NX46 363 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 FAM8A1Q9UBU6 413 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 ATP6V1HQ9UI12 483 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 TBX21Q9UL17 535 aa8.62□□□□□ -1.03
NCBP3-204ENST00000574911 HELZP42694 1942 aaKnown RBP8.62□□□□□ -1.03
NCBP3-204ENST00000574911 TTC34A8MYJ7 566 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 RNASET2O00584 256 aaKnown RBP8.61□□□□□ -1.03
NCBP3-204ENST00000574911 CCL16O15467 120 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 PCDHGA12O60330 932 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 ATG13O75143 517 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 CTSLP07711 333 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 TYRP14679 529 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 TIA1P31483 386 aaKnown RBP eCLIP8.61□□□□□ -1.03
NCBP3-204ENST00000574911 PPM1AP35813 382 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 CD97P48960 835 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 RPS13P62277 151 aaKnown RBP8.61□□□□□ -1.03
NCBP3-204ENST00000574911 LRRC74AQ0VAA2 488 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 ZNF658BQ4V348 819 aaPredicted RBP8.61□□□□□ -1.03
NCBP3-204ENST00000574911 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.61□□□□□ -1.03
NCBP3-204ENST00000574911 NIPAL1Q6NVV3 410 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 SLCO4C1Q6ZQN7 724 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 FAM124AQ86V42 546 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 P2RY8Q86VZ1 359 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 ENTHD1Q8IYW4 607 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 NAGSQ8N159 534 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 KREMEN2Q8NCW0 462 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 GOT1L1Q8NHS2 421 aaPredicted RBP8.61□□□□□ -1.03
NCBP3-204ENST00000574911 DYNC2LI1Q8TCX1 351 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 GLYATL1Q969I3 302 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 MAL2Q969L2 176 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 CXorf40BQ96DE9 158 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 HRASLS5Q96KN8 279 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 BTBD2Q9BX70 525 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 ALOXE3Q9BYJ1 711 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 BHLHE41Q9C0J9 482 aaPredicted RBP8.61□□□□□ -1.03
NCBP3-204ENST00000574911 HMG20AQ9NP66 347 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 HCFC1R1Q9NWW0 138 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 ZNF282Q9UDV7 671 aaPredicted RBP8.61□□□□□ -1.03
NCBP3-204ENST00000574911 VPS4AQ9UN37 437 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 PCDHGB3Q9Y5G1 929 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 PCDHGA6Q9Y5G7 932 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 OR2A25A4D2G3 310 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 FKTNO75072 461 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 SH3BGRLO75368 114 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 MOSPD3O75425 235 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 FGF18O76093 207 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 FADS2O95864 444 aaKnown RBP8.61□□□□□ -1.03
NCBP3-204ENST00000574911 SLC16A8O95907 504 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 MYCP01106 439 aaPredicted RBP8.61□□□□□ -1.03
NCBP3-204ENST00000574911 ZNF8P17098 575 aaPredicted RBP8.61□□□□□ -1.03
NCBP3-204ENST00000574911 MAPK9P45984 424 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 RXRGP48443 463 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 PXNP49023 591 aaPredicted RBP8.61□□□□□ -1.03
NCBP3-204ENST00000574911 ST13P50502 369 aaKnown RBP8.61□□□□□ -1.03
NCBP3-204ENST00000574911 BCAP31P51572 246 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 MVDP53602 400 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 PNLIPRP1P54315 467 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 CSNK2BP67870 215 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 FADDQ13158 208 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 CAMK2GQ13555 558 aaPredicted RBP8.61□□□□□ -1.03
NCBP3-204ENST00000574911 TEAD4Q15561 434 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 DGUOKQ16854 277 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 ZNF284Q2VY69 593 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 ZNF385BQ569K4 471 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 EGFLAMQ63HQ2 1017 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 CCDC81Q6ZN84 652 aa8.61□□□□□ -1.03
NCBP3-204ENST00000574911 BTLAQ7Z6A9 289 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms