RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 CSKP41240 450 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 CENPAP49450 140 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 DRG2P55039 364 aaKnown RBP5.24□□□□□ -1.57
SF3B3-214ENST00000572365 ARF3P61204 181 aaPredicted RBP5.24□□□□□ -1.57
SF3B3-214ENST00000572365 YWHAZP63104 245 aaKnown RBP5.24□□□□□ -1.57
SF3B3-214ENST00000572365 ASIC1P78348 528 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 ARF1P84077 181 aaKnown RBP5.24□□□□□ -1.57
SF3B3-214ENST00000572365 KLRB1Q12918 225 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 MAMLD1Q13495 774 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 MEA1Q16626 185 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 KRTAP21-3Q3LHN1 58 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 NADK2Q4G0N4 442 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 BMP2KLQ5H9B9 411 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 PIK3CD-AS1Q5SR53 167 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 CCDC183Q5T5S1 534 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 FAM205BPQ63HN1 556 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 ATG9BQ674R7 924 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 CDC73Q6P1J9 531 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 TMCO3Q6UWJ1 677 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 PTAR1Q7Z6K3 402 aaPredicted RBP5.24□□□□□ -1.57
SF3B3-214ENST00000572365 DSG4Q86SJ6 1040 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 KIAA1328Q86T90 577 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 ZDHHC23Q8IYP9 409 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 FAM185AQ8N0U4 392 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 SLC25A41Q8N5S1 370 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 LRRC52Q8N7C0 313 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 ZNF548Q8NEK5 533 aaPredicted RBP5.24□□□□□ -1.57
SF3B3-214ENST00000572365 SLC2A14Q8TDB8 520 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 C19orf60Q96EN9 201 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 TMA16Q96EY4 203 aaKnown RBP5.24□□□□□ -1.57
SF3B3-214ENST00000572365 GFM1Q96RP9 751 aaKnown RBP5.24□□□□□ -1.57
SF3B3-214ENST00000572365 IL12RB2Q99665 862 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 CBWD1Q9BRT8 395 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 WDR83Q9BRX9 315 aaKnown RBP5.24□□□□□ -1.57
SF3B3-214ENST00000572365 ELOVL4Q9GZR5 314 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 SDCBP2Q9H190 292 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 SUDS3Q9H7L9 328 aaPredicted RBP5.24□□□□□ -1.57
SF3B3-214ENST00000572365 PNRC2Q9NPJ4 139 aaKnown RBP5.24□□□□□ -1.57
SF3B3-214ENST00000572365 PDRG1Q9NUG6 133 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 IL37Q9NZH6 218 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 NCKIPSDQ9NZQ3 722 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 LARSQ9P2J5 1176 aaKnown RBP5.24□□□□□ -1.57
SF3B3-214ENST00000572365 HMGXB4Q9UGU5 601 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 ITGA11Q9UKX5 1188 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 INTS6Q9UL03 887 aaKnown RBP5.24□□□□□ -1.57
SF3B3-214ENST00000572365 MRPS18BQ9Y676 258 aaKnown RBP5.24□□□□□ -1.57
SF3B3-214ENST00000572365 ZNF106Q9H2Y7 1883 aaKnown RBP5.24□□□□□ -1.57
SF3B3-214ENST00000572365 CCDC88CQ9P219 2028 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 PRAMEF26H0Y7S4 382 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 EBAG9O00559 213 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 RAD51BO15315 384 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 NVLO15381 856 aaKnown RBP5.23□□□□□ -1.57
SF3B3-214ENST00000572365 AQP9O43315 295 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 LATO43561 262 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 CNOT3O75175 753 aaKnown RBP5.23□□□□□ -1.57
SF3B3-214ENST00000572365 SMC2O95347 1197 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 ADCY5O95622 1261 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 RPLP0P05388 317 aaKnown RBP5.23□□□□□ -1.57
SF3B3-214ENST00000572365 ATP5BP06576 529 aaKnown RBP5.23□□□□□ -1.57
SF3B3-214ENST00000572365 SPARCP09486 303 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 DLATP10515 647 aaKnown RBP5.23□□□□□ -1.57
SF3B3-214ENST00000572365 ZNF8P17098 575 aaPredicted RBP5.23□□□□□ -1.57
SF3B3-214ENST00000572365 PSMA5P28066 241 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 POU1F1P28069 291 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 GJB2P29033 226 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 EPHB2P29323 1055 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 MPGP29372 298 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 OAS2P29728 719 aaKnown RBP5.23□□□□□ -1.57
SF3B3-214ENST00000572365 ARL3P36405 182 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 TAS2R38P59533 333 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 MYL6P60660 151 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 ST8SIA6P61647 398 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 GTF2BQ00403 316 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 FOXD4Q12950 439 aaPredicted RBP5.23□□□□□ -1.57
SF3B3-214ENST00000572365 FZD2Q14332 565 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 TAF11Q15544 211 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 HNRNPA1L2Q32P51 320 aaKnown RBP5.23□□□□□ -1.57
SF3B3-214ENST00000572365 FSCBQ5H9T9 825 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 ENTPD8Q5MY95 495 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 ASPHD1Q5U4P2 390 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 SEL1L3Q68CR1 1132 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 KRBA2Q6ZNG9 492 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 FAM83HQ6ZRV2 1179 aaPredicted RBP5.23□□□□□ -1.57
SF3B3-214ENST00000572365 ASB18Q6ZVZ8 466 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 SLC46A3Q7Z3Q1 461 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 TMEM135Q86UB9 458 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 APCDD1Q8J025 514 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 FBXL16Q8N461 479 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 CARNMT1Q8N4J0 409 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 EME1Q96AY2 570 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 PERPQ96FX8 193 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 ANKRD36BP1Q96IX9 119 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 BMFQ96LC9 184 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 FIZ1Q96SL8 496 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 QTRT1Q9BXR0 403 aaKnown RBP5.23□□□□□ -1.57
SF3B3-214ENST00000572365 FGFBP2Q9BYJ0 223 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 STRADBQ9C0K7 418 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 RDH14Q9HBH5 336 aa5.23□□□□□ -1.57
SF3B3-214ENST00000572365 DMAP1Q9NPF5 467 aaPredicted RBP5.23□□□□□ -1.57
SF3B3-214ENST00000572365 ERVW-1Q9UQF0 538 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms