RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 SLC6A14Q9UN76 642 aa16.24■□□□□ 0.19
LITAF-209ENST00000571688 TEX51A0A1B0GUA7 166 aa16.24■□□□□ 0.19
LITAF-209ENST00000571688 OR2B3O76000 313 aa16.24■□□□□ 0.19
LITAF-209ENST00000571688 THP07101 528 aa16.24■□□□□ 0.19
LITAF-209ENST00000571688 SLC10A3P09131 477 aa16.24■□□□□ 0.19
LITAF-209ENST00000571688 ANXA8P13928 327 aa16.24■□□□□ 0.19
LITAF-209ENST00000571688 SDC1P18827 310 aa16.24■□□□□ 0.19
LITAF-209ENST00000571688 ALAS2P22557 587 aa16.24■□□□□ 0.19
LITAF-209ENST00000571688 SMARCB1Q12824 385 aa16.24■□□□□ 0.19
LITAF-209ENST00000571688 ABRQ12979 859 aa16.24■□□□□ 0.19
LITAF-209ENST00000571688 SYNPOQ8N3V7 929 aa16.24■□□□□ 0.19
LITAF-209ENST00000571688 GDPD1Q8N9F7 314 aa16.24■□□□□ 0.19
LITAF-209ENST00000571688 TTC16Q8NEE8 873 aa16.24■□□□□ 0.19
LITAF-209ENST00000571688 WDR36Q8NI36 951 aaKnown RBP16.24■□□□□ 0.19
LITAF-209ENST00000571688 NIPSNAP1Q9BPW8 284 aa16.24■□□□□ 0.19
LITAF-209ENST00000571688 MGME1Q9BQP7 344 aa16.24■□□□□ 0.19
LITAF-209ENST00000571688 SNTG1Q9NSN8 517 aa16.24■□□□□ 0.19
LITAF-209ENST00000571688 WWOXQ9NZC7 414 aa16.24■□□□□ 0.19
LITAF-209ENST00000571688 VPS4AQ9UN37 437 aa16.24■□□□□ 0.19
LITAF-209ENST00000571688 PPP2R3BQ9Y5P8 575 aa16.24■□□□□ 0.19
LITAF-209ENST00000571688 TRIP12Q14669 1992 aaPredicted RBP16.23■□□□□ 0.19
LITAF-209ENST00000571688 TMEM229AB2RXF0 380 aa16.23■□□□□ 0.19
LITAF-209ENST00000571688 ZNF670-ZNF695F2Z2N8 137 aa16.23■□□□□ 0.19
LITAF-209ENST00000571688 FPGTO14772 594 aa16.23■□□□□ 0.19
LITAF-209ENST00000571688 PLA2G10O15496 165 aa16.23■□□□□ 0.19
LITAF-209ENST00000571688 EPN2O95208 641 aa16.23■□□□□ 0.19
LITAF-209ENST00000571688 PRLP01236 227 aa16.23■□□□□ 0.19
LITAF-209ENST00000571688 RUNX1T1Q06455 604 aa16.23■□□□□ 0.19
LITAF-209ENST00000571688 HSPA14Q0VDF9 509 aa16.23■□□□□ 0.19
LITAF-209ENST00000571688 MTAPQ13126 283 aa16.23■□□□□ 0.19
LITAF-209ENST00000571688 VEPH1Q14D04 833 aa16.23■□□□□ 0.19
LITAF-209ENST00000571688 LARS2Q15031 903 aaKnown RBP16.23■□□□□ 0.19
LITAF-209ENST00000571688 PLAG1Q6DJT9 500 aa16.23■□□□□ 0.19
LITAF-209ENST00000571688 FAAH2Q6GMR7 532 aa16.23■□□□□ 0.19
LITAF-209ENST00000571688 LAMTOR1Q6IAA8 161 aa16.23■□□□□ 0.19
LITAF-209ENST00000571688 NLGN4YQ8NFZ3 816 aaPredicted RBP16.23■□□□□ 0.19
LITAF-209ENST00000571688 OR4C15Q8NGM1 316 aa16.23■□□□□ 0.19
LITAF-209ENST00000571688 UBTD2Q8WUN7 234 aa16.23■□□□□ 0.19
LITAF-209ENST00000571688 ULK4Q96C45 1275 aa16.23■□□□□ 0.19
LITAF-209ENST00000571688 TRMT61AQ96FX7 289 aaKnown RBP16.23■□□□□ 0.19
LITAF-209ENST00000571688 C8orf48Q96LL4 319 aa16.23■□□□□ 0.19
LITAF-209ENST00000571688 EGFL8Q99944 293 aa16.23■□□□□ 0.19
LITAF-209ENST00000571688 GTPBP2Q9BX10 602 aaKnown RBP16.23■□□□□ 0.19
LITAF-209ENST00000571688 MIXL1Q9H2W2 232 aa16.23■□□□□ 0.19
LITAF-209ENST00000571688 TMEM39AQ9NV64 488 aa16.23■□□□□ 0.19
LITAF-209ENST00000571688 MAT2BQ9NZL9 334 aa16.23■□□□□ 0.19
LITAF-209ENST00000571688 SH3D21A4FU49 640 aa16.23■□□□□ 0.19
LITAF-209ENST00000571688 CASTOR2A6NHX0 329 aa16.23■□□□□ 0.19
LITAF-209ENST00000571688 DRGXA6NNA5 263 aa16.23■□□□□ 0.19
LITAF-209ENST00000571688 LRATO95237 230 aa16.23■□□□□ 0.19
LITAF-209ENST00000571688 PDYNP01213 254 aa16.23■□□□□ 0.19
LITAF-209ENST00000571688 ACADMP11310 421 aa16.23■□□□□ 0.19
LITAF-209ENST00000571688 CRYBB2P43320 205 aa16.23■□□□□ 0.19
LITAF-209ENST00000571688 ALDH9A1P49189 494 aa16.23■□□□□ 0.19
LITAF-209ENST00000571688 TGM4P49221 684 aa16.23■□□□□ 0.19
LITAF-209ENST00000571688 YBEYP58557 167 aaPredicted RBP16.23■□□□□ 0.19
LITAF-209ENST00000571688 CACNB2Q08289 660 aaPredicted RBP16.23■□□□□ 0.19
LITAF-209ENST00000571688 GPR19Q15760 415 aa16.23■□□□□ 0.19
LITAF-209ENST00000571688 PTCHD3Q3KNS1 767 aa16.23■□□□□ 0.19
LITAF-209ENST00000571688 ZNF792Q3KQV3 632 aa16.23■□□□□ 0.19
LITAF-209ENST00000571688 TOR2AQ5JU69 321 aa16.23■□□□□ 0.19
LITAF-209ENST00000571688 TRPM4Q8TD43 1214 aa16.23■□□□□ 0.19
LITAF-209ENST00000571688 PANX1Q96RD7 426 aa16.23■□□□□ 0.19
LITAF-209ENST00000571688 FAM126AQ9BYI3 521 aaPredicted RBP16.23■□□□□ 0.19
LITAF-209ENST00000571688 B3GNT2Q9NY97 397 aa16.23■□□□□ 0.19
LITAF-209ENST00000571688 FNDC3AQ9Y2H6 1198 aaKnown RBP16.23■□□□□ 0.19
LITAF-209ENST00000571688 LSM2Q9Y333 95 aaKnown RBP16.23■□□□□ 0.19
LITAF-209ENST00000571688 ACTL7AQ9Y615 435 aa16.23■□□□□ 0.19
LITAF-209ENST00000571688 OR5K3A6NET4 321 aa16.22■□□□□ 0.19
LITAF-209ENST00000571688 ADAMDEC1O15204 470 aa16.22■□□□□ 0.19
LITAF-209ENST00000571688 SUV39H1O43463 412 aa16.22■□□□□ 0.19
LITAF-209ENST00000571688 SMPD1P17405 629 aa16.22■□□□□ 0.19
LITAF-209ENST00000571688 KIR3DL1P43629 444 aa16.22■□□□□ 0.19
LITAF-209ENST00000571688 SNRPD2P62316 118 aaKnown RBP16.22■□□□□ 0.19
LITAF-209ENST00000571688 FAM189BP81408 668 aa16.22■□□□□ 0.19
LITAF-209ENST00000571688 RHAGQ02094 409 aa16.22■□□□□ 0.19
LITAF-209ENST00000571688 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.22■□□□□ 0.19
LITAF-209ENST00000571688 ZNF648Q5T619 568 aaPredicted RBP16.22■□□□□ 0.19
LITAF-209ENST00000571688 NADSYN1Q6IA69 706 aa16.22■□□□□ 0.19
LITAF-209ENST00000571688 AMIGO1Q86WK6 493 aa16.22■□□□□ 0.19
LITAF-209ENST00000571688 ZNF557Q8N988 423 aaPredicted RBP16.22■□□□□ 0.19
LITAF-209ENST00000571688 OR6J1Q8NGC5 347 aa16.22■□□□□ 0.19
LITAF-209ENST00000571688 NECTIN4Q96NY8 510 aa16.22■□□□□ 0.19
LITAF-209ENST00000571688 MCOLN1Q9GZU1 580 aa16.22■□□□□ 0.19
LITAF-209ENST00000571688 BPIFA1Q9NP55 256 aa16.22■□□□□ 0.19
LITAF-209ENST00000571688 ABCB9Q9NP78 766 aa16.22■□□□□ 0.19
LITAF-209ENST00000571688 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.22■□□□□ 0.19
LITAF-209ENST00000571688 NUP50Q9UKX7 468 aa16.22■□□□□ 0.19
LITAF-209ENST00000571688 MAPRE3Q9UPY8 281 aa16.22■□□□□ 0.19
LITAF-209ENST00000571688 CHD5Q8TDI0 1954 aa16.22■□□□□ 0.19
LITAF-209ENST00000571688 FHP07954 510 aa16.22■□□□□ 0.19
LITAF-209ENST00000571688 IFI30P13284 250 aa16.22■□□□□ 0.19
LITAF-209ENST00000571688 ITGB7P26010 798 aa16.22■□□□□ 0.19
LITAF-209ENST00000571688 OR1E1P30953 314 aa16.22■□□□□ 0.19
LITAF-209ENST00000571688 CSTF2P33240 577 aaKnown RBP eCLIP16.22■□□□□ 0.19
LITAF-209ENST00000571688 RGRP47804 291 aa16.22■□□□□ 0.19
LITAF-209ENST00000571688 TATDN3Q17R31 274 aa16.22■□□□□ 0.19
LITAF-209ENST00000571688 METTL23Q86XA0 190 aa16.22■□□□□ 0.19
LITAF-209ENST00000571688 STK40Q8N2I9 435 aa16.22■□□□□ 0.19
LITAF-209ENST00000571688 ENKURQ8TC29 256 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms