RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 PABPN1LA6NDY0 278 aaKnown RBP12.89□□□□□ -0.35
CNOT1-215ENST00000569020 SGK494L7N484 410 aa12.89□□□□□ -0.35
CNOT1-215ENST00000569020 CCL21O00585 134 aa12.89□□□□□ -0.35
CNOT1-215ENST00000569020 MST1P26927 711 aa12.89□□□□□ -0.35
CNOT1-215ENST00000569020 CASP6P55212 293 aa12.89□□□□□ -0.35
CNOT1-215ENST00000569020 ART3Q13508 389 aa12.89□□□□□ -0.35
CNOT1-215ENST00000569020 EXT1Q16394 746 aa12.89□□□□□ -0.35
CNOT1-215ENST00000569020 MEP1AQ16819 746 aa12.89□□□□□ -0.35
CNOT1-215ENST00000569020 CAPN13Q6MZZ7 669 aaPredicted RBP12.89□□□□□ -0.35
CNOT1-215ENST00000569020 H3F3CQ6NXT2 135 aa12.89□□□□□ -0.35
CNOT1-215ENST00000569020 AGTRAPQ6RW13 159 aa12.89□□□□□ -0.35
CNOT1-215ENST00000569020 LCTLQ6UWM7 567 aa12.89□□□□□ -0.35
CNOT1-215ENST00000569020 ANKRD37Q7Z713 158 aa12.89□□□□□ -0.35
CNOT1-215ENST00000569020 PCGF5Q86SE9 256 aa12.89□□□□□ -0.35
CNOT1-215ENST00000569020 SLC26A11Q86WA9 606 aa12.89□□□□□ -0.35
CNOT1-215ENST00000569020 PPIL6Q8IXY8 311 aa12.89□□□□□ -0.35
CNOT1-215ENST00000569020 BEST3Q8N1M1 668 aa12.89□□□□□ -0.35
CNOT1-215ENST00000569020 AMER2Q8N7J2 671 aa12.89□□□□□ -0.35
CNOT1-215ENST00000569020 NAT8LQ8N9F0 302 aa12.89□□□□□ -0.35
CNOT1-215ENST00000569020 KCT2Q8NC54 265 aa12.89□□□□□ -0.35
CNOT1-215ENST00000569020 M1APQ8TC57 530 aa12.89□□□□□ -0.35
CNOT1-215ENST00000569020 GRK7Q8WTQ7 553 aa12.89□□□□□ -0.35
CNOT1-215ENST00000569020 EEF1AKMT1Q8WVE0 214 aa12.89□□□□□ -0.35
CNOT1-215ENST00000569020 SLC13A3Q8WWT9 602 aa12.89□□□□□ -0.35
CNOT1-215ENST00000569020 TM4SF19Q96DZ7 209 aa12.89□□□□□ -0.35
CNOT1-215ENST00000569020 MOCOSQ96EN8 888 aa12.89□□□□□ -0.35
CNOT1-215ENST00000569020 NDNQ99608 321 aa12.89□□□□□ -0.35
CNOT1-215ENST00000569020 PARVBQ9HBI1 364 aa12.89□□□□□ -0.35
CNOT1-215ENST00000569020 PCDHGB6Q9Y5F9 930 aa12.89□□□□□ -0.35
CNOT1-215ENST00000569020 KLF2Q9Y5W3 355 aaPredicted RBP12.89□□□□□ -0.35
CNOT1-215ENST00000569020 SLC16A5O15375 505 aa12.88□□□□□ -0.35
CNOT1-215ENST00000569020 TTI1O43156 1089 aa12.88□□□□□ -0.35
CNOT1-215ENST00000569020 LCMT2O60294 686 aaKnown RBP12.88□□□□□ -0.35
CNOT1-215ENST00000569020 RDH16O75452 317 aa12.88□□□□□ -0.35
CNOT1-215ENST00000569020 MLYCDO95822 493 aa12.88□□□□□ -0.35
CNOT1-215ENST00000569020 PGAM1P18669 254 aa12.88□□□□□ -0.35
CNOT1-215ENST00000569020 IL10P22301 178 aa12.88□□□□□ -0.35
CNOT1-215ENST00000569020 CA7P43166 264 aa12.88□□□□□ -0.35
CNOT1-215ENST00000569020 SRSF11Q05519 484 aaKnown RBP12.88□□□□□ -0.35
CNOT1-215ENST00000569020 ACTN3Q08043 901 aaPredicted RBP12.88□□□□□ -0.35
CNOT1-215ENST00000569020 NAE1Q13564 534 aa12.88□□□□□ -0.35
CNOT1-215ENST00000569020 CYP1B1Q16678 543 aa12.88□□□□□ -0.35
CNOT1-215ENST00000569020 ACER2Q5QJU3 275 aa12.88□□□□□ -0.35
CNOT1-215ENST00000569020 FCRLBQ6BAA4 426 aa12.88□□□□□ -0.35
CNOT1-215ENST00000569020 MBOAT1Q6ZNC8 495 aa12.88□□□□□ -0.35
CNOT1-215ENST00000569020 MRGPRGQ86SM5 289 aa12.88□□□□□ -0.35
CNOT1-215ENST00000569020 AGGF1Q8N302 714 aaeCLIP12.88□□□□□ -0.35
CNOT1-215ENST00000569020 ZNF808Q8N4W9 903 aaPredicted RBP12.88□□□□□ -0.35
CNOT1-215ENST00000569020 C2CD4AQ8NCU7 369 aaPredicted RBP12.88□□□□□ -0.35
CNOT1-215ENST00000569020 ITLN2Q8WWU7 325 aaPredicted RBP12.88□□□□□ -0.35
CNOT1-215ENST00000569020 PEX11GQ96HA9 241 aa12.88□□□□□ -0.35
CNOT1-215ENST00000569020 CCDC120Q96HB5 630 aa12.88□□□□□ -0.35
CNOT1-215ENST00000569020 MS4A14Q96JA4 679 aa12.88□□□□□ -0.35
CNOT1-215ENST00000569020 LPAR4Q99677 370 aa12.88□□□□□ -0.35
CNOT1-215ENST00000569020 UTP23Q9BRU9 249 aaKnown RBP12.88□□□□□ -0.35
CNOT1-215ENST00000569020 HAUS8Q9BT25 410 aa12.88□□□□□ -0.35
CNOT1-215ENST00000569020 UNKQ9C0B0 810 aaKnown RBP12.88□□□□□ -0.35
CNOT1-215ENST00000569020 SH3BGRL2Q9UJC5 107 aa12.88□□□□□ -0.35
CNOT1-215ENST00000569020 SH2B3Q9UQQ2 575 aa12.88□□□□□ -0.35
CNOT1-215ENST00000569020 PPP2R2CQ9Y2T4 447 aa12.88□□□□□ -0.35
CNOT1-215ENST00000569020 NAALAD2Q9Y3Q0 740 aa12.88□□□□□ -0.35
CNOT1-215ENST00000569020 NEU2Q9Y3R4 380 aa12.88□□□□□ -0.35
CNOT1-215ENST00000569020 JRKLQ9Y4A0 524 aa12.88□□□□□ -0.35
CNOT1-215ENST00000569020 SLC22A7Q9Y694 548 aa12.88□□□□□ -0.35
CNOT1-215ENST00000569020 OR2W5A6NFC9 320 aa12.87□□□□□ -0.35
CNOT1-215ENST00000569020 PGRMC1O00264 195 aaKnown RBP12.87□□□□□ -0.35
CNOT1-215ENST00000569020 CDC123O75794 336 aaPredicted RBP12.87□□□□□ -0.35
CNOT1-215ENST00000569020 CDH1P12830 882 aa12.87□□□□□ -0.35
CNOT1-215ENST00000569020 EEF1DP29692 281 aaKnown RBP12.87□□□□□ -0.35
CNOT1-215ENST00000569020 SKP1P63208 163 aa12.87□□□□□ -0.35
CNOT1-215ENST00000569020 PMP22Q01453 160 aa12.87□□□□□ -0.35
CNOT1-215ENST00000569020 TUBA3CQ13748 450 aa12.87□□□□□ -0.35
CNOT1-215ENST00000569020 HERC3Q15034 1050 aa12.87□□□□□ -0.35
CNOT1-215ENST00000569020 NSDHLQ15738 373 aa12.87□□□□□ -0.35
CNOT1-215ENST00000569020 SFT2D3Q587I9 215 aa12.87□□□□□ -0.35
CNOT1-215ENST00000569020 NIPAL1Q6NVV3 410 aa12.87□□□□□ -0.35
CNOT1-215ENST00000569020 TUBA3EQ6PEY2 450 aa12.87□□□□□ -0.35
CNOT1-215ENST00000569020 PAPD4Q6PIY7 484 aaKnown RBP12.87□□□□□ -0.35
CNOT1-215ENST00000569020 PAQR3Q6TCH7 311 aa12.87□□□□□ -0.35
CNOT1-215ENST00000569020 RPTNQ6XPR3 784 aa12.87□□□□□ -0.35
CNOT1-215ENST00000569020 PDSS2Q86YH6 399 aa12.87□□□□□ -0.35
CNOT1-215ENST00000569020 CRLF3Q8IUI8 442 aa12.87□□□□□ -0.35
CNOT1-215ENST00000569020 MCEMP1Q8IX19 187 aa12.87□□□□□ -0.35
CNOT1-215ENST00000569020 TBC1D19Q8N5T2 526 aa12.87□□□□□ -0.35
CNOT1-215ENST00000569020 SLC5A8Q8N695 610 aa12.87□□□□□ -0.35
CNOT1-215ENST00000569020 MFSD9Q8NBP5 474 aa12.87□□□□□ -0.35
CNOT1-215ENST00000569020 FAM98AQ8NCA5 519 aaKnown RBP12.87□□□□□ -0.35
CNOT1-215ENST00000569020 PLPP5Q8NEB5 264 aa12.87□□□□□ -0.35
CNOT1-215ENST00000569020 OR1F2PQ96R84 312 aa12.87□□□□□ -0.35
CNOT1-215ENST00000569020 SGPP1Q9BX95 441 aa12.87□□□□□ -0.35
CNOT1-215ENST00000569020 TRIM54Q9BYV2 358 aa12.87□□□□□ -0.35
CNOT1-215ENST00000569020 MMP25Q9NPA2 562 aa12.87□□□□□ -0.35
CNOT1-215ENST00000569020 CHST11Q9NPF2 352 aa12.87□□□□□ -0.35
CNOT1-215ENST00000569020 METRNQ9UJH8 293 aa12.87□□□□□ -0.35
CNOT1-215ENST00000569020 NOTCH2Q04721 2471 aa12.87□□□□□ -0.35
CNOT1-215ENST00000569020 CRYBG3Q68DQ2 2970 aa12.86□□□□□ -0.35
CNOT1-215ENST00000569020 GOLGA6L10A0A0M3HER8 536 aa12.86□□□□□ -0.35
CNOT1-215ENST00000569020 MAGEB17A8MXT2 336 aa12.86□□□□□ -0.35
CNOT1-215ENST00000569020 NDUFS4O43181 175 aa12.86□□□□□ -0.35
CNOT1-215ENST00000569020 SLC19A2O60779 497 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms