RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 CCNG2Q16589 344 aa14.83□□□□□ -0.04
HERPUD1-215ENST00000568676 FCRLBQ6BAA4 426 aa14.83□□□□□ -0.04
HERPUD1-215ENST00000568676 PAPD4Q6PIY7 484 aaKnown RBP14.83□□□□□ -0.04
HERPUD1-215ENST00000568676 GALNTL5Q7Z4T8 443 aa14.83□□□□□ -0.04
HERPUD1-215ENST00000568676 VN1R4Q7Z5H5 301 aa14.83□□□□□ -0.04
HERPUD1-215ENST00000568676 CILP2Q8IUL8 1156 aa14.83□□□□□ -0.04
HERPUD1-215ENST00000568676 LRRC56Q8IYG6 542 aaPredicted RBP14.83□□□□□ -0.04
HERPUD1-215ENST00000568676 PPFIBP2Q8ND30 876 aa14.83□□□□□ -0.04
HERPUD1-215ENST00000568676 C1orf54Q8WWF1 131 aa14.83□□□□□ -0.04
HERPUD1-215ENST00000568676 KCNJ9Q92806 393 aa14.83□□□□□ -0.04
HERPUD1-215ENST00000568676 FAM136AQ96C01 138 aa14.83□□□□□ -0.04
HERPUD1-215ENST00000568676 DMRTA2Q96SC8 542 aa14.83□□□□□ -0.04
HERPUD1-215ENST00000568676 CCDC68Q9H2F9 335 aa14.83□□□□□ -0.04
HERPUD1-215ENST00000568676 CCDC177Q9NQR7 707 aaPredicted RBP14.83□□□□□ -0.04
HERPUD1-215ENST00000568676 LRFN1Q9P244 771 aa14.83□□□□□ -0.04
HERPUD1-215ENST00000568676 ZKSCAN5Q9Y2L8 839 aa14.83□□□□□ -0.04
HERPUD1-215ENST00000568676 SLC22A7Q9Y694 548 aa14.83□□□□□ -0.04
HERPUD1-215ENST00000568676 HIVEP1P15822 2718 aa14.83□□□□□ -0.04
HERPUD1-215ENST00000568676 HEATR5BQ9P2D3 2071 aa14.83□□□□□ -0.04
HERPUD1-215ENST00000568676 SCN2AQ99250 2005 aa14.82□□□□□ -0.04
HERPUD1-215ENST00000568676 DCHS2Q6V1P9 2916 aa14.82□□□□□ -0.04
HERPUD1-215ENST00000568676 MAGEB17A8MXT2 336 aa14.82□□□□□ -0.04
HERPUD1-215ENST00000568676 FOXO6A8MYZ6 492 aa14.82□□□□□ -0.04
HERPUD1-215ENST00000568676 NEURL1O76050 574 aa14.82□□□□□ -0.04
HERPUD1-215ENST00000568676 WISP2O76076 250 aa14.82□□□□□ -0.04
HERPUD1-215ENST00000568676 SYF2O95926 243 aaKnown RBP14.82□□□□□ -0.04
HERPUD1-215ENST00000568676 CD1EP15812 388 aa14.82□□□□□ -0.04
HERPUD1-215ENST00000568676 TPSB2P20231 275 aa14.82□□□□□ -0.04
HERPUD1-215ENST00000568676 CCND1P24385 295 aa14.82□□□□□ -0.04
HERPUD1-215ENST00000568676 GRK3P35626 688 aa14.82□□□□□ -0.04
HERPUD1-215ENST00000568676 SARNPP82979 210 aaKnown RBP14.82□□□□□ -0.04
HERPUD1-215ENST00000568676 MPP1Q00013 466 aa14.82□□□□□ -0.04
HERPUD1-215ENST00000568676 SNX1Q13596 522 aa14.82□□□□□ -0.04
HERPUD1-215ENST00000568676 USP10Q14694 798 aaKnown RBP14.82□□□□□ -0.04
HERPUD1-215ENST00000568676 ABRAXAS2Q15018 415 aa14.82□□□□□ -0.04
HERPUD1-215ENST00000568676 CDSNQ15517 529 aa14.82□□□□□ -0.04
HERPUD1-215ENST00000568676 TPSAB1Q15661 275 aa14.82□□□□□ -0.04
HERPUD1-215ENST00000568676 SFT2D3Q587I9 215 aa14.82□□□□□ -0.04
HERPUD1-215ENST00000568676 LRRC8EQ6NSJ5 796 aa14.82□□□□□ -0.04
HERPUD1-215ENST00000568676 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.82□□□□□ -0.04
HERPUD1-215ENST00000568676 DOLPP1Q86YN1 238 aa14.82□□□□□ -0.04
HERPUD1-215ENST00000568676 PLD3Q8IV08 490 aa14.82□□□□□ -0.04
HERPUD1-215ENST00000568676 TM4SF19Q96DZ7 209 aa14.82□□□□□ -0.04
HERPUD1-215ENST00000568676 NPAS2Q99743 824 aa14.82□□□□□ -0.04
HERPUD1-215ENST00000568676 TRIM45Q9H8W5 580 aaPredicted RBP14.82□□□□□ -0.04
HERPUD1-215ENST00000568676 ANKRD10Q9NXR5 420 aa14.82□□□□□ -0.04
HERPUD1-215ENST00000568676 HCN3Q9P1Z3 774 aa14.82□□□□□ -0.04
HERPUD1-215ENST00000568676 COMMD10Q9Y6G5 202 aa14.82□□□□□ -0.04
HERPUD1-215ENST00000568676 NDC80O14777 642 aa14.81□□□□□ -0.04
HERPUD1-215ENST00000568676 NME2P1O60361 137 aa14.81□□□□□ -0.04
HERPUD1-215ENST00000568676 SLC25A12O75746 678 aa14.81□□□□□ -0.04
HERPUD1-215ENST00000568676 SLC35G6P0C7Q6 338 aa14.81□□□□□ -0.04
HERPUD1-215ENST00000568676 ZSCAN5DPP0CG00 497 aa14.81□□□□□ -0.04
HERPUD1-215ENST00000568676 IL1RNP18510 177 aa14.81□□□□□ -0.04
HERPUD1-215ENST00000568676 NME2P22392 152 aa14.81□□□□□ -0.04
HERPUD1-215ENST00000568676 JAK1P23458 1154 aa14.81□□□□□ -0.04
HERPUD1-215ENST00000568676 MGAT1P26572 445 aa14.81□□□□□ -0.04
HERPUD1-215ENST00000568676 IMPA1P29218 277 aa14.81□□□□□ -0.04
HERPUD1-215ENST00000568676 CYB561P49447 251 aa14.81□□□□□ -0.04
HERPUD1-215ENST00000568676 CSNK1G2P78368 415 aa14.81□□□□□ -0.04
HERPUD1-215ENST00000568676 RHAGQ02094 409 aa14.81□□□□□ -0.04
HERPUD1-215ENST00000568676 HERC3Q15034 1050 aa14.81□□□□□ -0.04
HERPUD1-215ENST00000568676 TMEM211Q6ICI0 200 aa14.81□□□□□ -0.04
HERPUD1-215ENST00000568676 NEPROQ6NW34 567 aa14.81□□□□□ -0.04
HERPUD1-215ENST00000568676 MEX3BQ6ZN04 569 aaKnown RBP14.81□□□□□ -0.04
HERPUD1-215ENST00000568676 CENPUQ71F23 418 aa14.81□□□□□ -0.04
HERPUD1-215ENST00000568676 PRUNE1Q86TP1 453 aa14.81□□□□□ -0.04
HERPUD1-215ENST00000568676 RPS19BP1Q86WX3 136 aaKnown RBP14.81□□□□□ -0.04
HERPUD1-215ENST00000568676 LMNTD2Q8IXW0 634 aa14.81□□□□□ -0.04
HERPUD1-215ENST00000568676 PRELID2Q8N945 189 aa14.81□□□□□ -0.04
HERPUD1-215ENST00000568676 ELP5Q8TE02 316 aa14.81□□□□□ -0.04
HERPUD1-215ENST00000568676 MAIP1Q8WWC4 291 aa14.81□□□□□ -0.04
HERPUD1-215ENST00000568676 TMEM125Q96AQ2 219 aa14.81□□□□□ -0.04
HERPUD1-215ENST00000568676 SDCCAG3Q96C92 435 aa14.81□□□□□ -0.04
HERPUD1-215ENST00000568676 BAG1Q99933 345 aaPredicted RBP14.81□□□□□ -0.04
HERPUD1-215ENST00000568676 HES7Q9BYE0 225 aa14.81□□□□□ -0.04
HERPUD1-215ENST00000568676 TSPAN10Q9H1Z9 355 aaPredicted RBP14.81□□□□□ -0.04
HERPUD1-215ENST00000568676 SLC24A3Q9HC58 644 aa14.81□□□□□ -0.04
HERPUD1-215ENST00000568676 ABCF3Q9NUQ8 709 aa14.81□□□□□ -0.04
HERPUD1-215ENST00000568676 SYBUQ9NX95 663 aa14.81□□□□□ -0.04
HERPUD1-215ENST00000568676 GALPQ9UBC7 116 aa14.81□□□□□ -0.04
HERPUD1-215ENST00000568676 PPT2Q9UMR5 302 aa14.81□□□□□ -0.04
HERPUD1-215ENST00000568676 CAPN6Q9Y6Q1 641 aa14.81□□□□□ -0.04
HERPUD1-215ENST00000568676 AKAP9Q99996 3911 aa14.81□□□□□ -0.04
HERPUD1-215ENST00000568676 TACC2O95359 2948 aa14.8□□□□□ -0.04
HERPUD1-215ENST00000568676 PCNX1Q96RV3 2341 aa14.8□□□□□ -0.04
HERPUD1-215ENST00000568676 MAGEB16A2A368 324 aa14.8□□□□□ -0.04
HERPUD1-215ENST00000568676 GOLGA8KD6RF30 607 aa14.8□□□□□ -0.04
HERPUD1-215ENST00000568676 GOLGA8TH3BQL2 631 aa14.8□□□□□ -0.04
HERPUD1-215ENST00000568676 SGK494L7N484 410 aa14.8□□□□□ -0.04
HERPUD1-215ENST00000568676 OR4D2P58180 307 aa14.8□□□□□ -0.04
HERPUD1-215ENST00000568676 SLC26A5P58743 744 aa14.8□□□□□ -0.04
HERPUD1-215ENST00000568676 KRTAP10-9P60411 292 aa14.8□□□□□ -0.04
HERPUD1-215ENST00000568676 MAPKAPK3Q16644 382 aa14.8□□□□□ -0.04
HERPUD1-215ENST00000568676 GSTA5Q7RTV2 222 aa14.8□□□□□ -0.04
HERPUD1-215ENST00000568676 PRSS41Q7RTY9 318 aa14.8□□□□□ -0.04
HERPUD1-215ENST00000568676 ASPGQ86U10 573 aa14.8□□□□□ -0.04
HERPUD1-215ENST00000568676 SLC13A3Q8WWT9 602 aa14.8□□□□□ -0.04
HERPUD1-215ENST00000568676 ASB5Q8WWX0 329 aa14.8□□□□□ -0.04
HERPUD1-215ENST00000568676 CCDC138Q96M89 665 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms