RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 YES1P07947 543 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 SFTPBP07988 381 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 ACP2P11117 423 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 CSF2RAP15509 400 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 CEBPBP17676 345 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 FBLP22087 321 aaKnown RBP3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 UGT1A1P22309 533 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 ELAVL4P26378 380 aaKnown RBP3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 HNRNPH1P31943 449 aaKnown RBP3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 OTX2P32243 289 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 STX2P32856 288 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 RFC4P35249 363 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 MNDAP41218 407 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 NKX2-1P43699 371 aaPredicted RBP3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 OR1G1P47890 313 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 RGS4P49798 205 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 TNFSF10P50591 281 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 GEMP55040 296 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 HERV-K104P63124 156 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 CNTN2Q02246 1040 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 SULT2A1Q06520 285 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 SLC3A1Q07837 685 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 RASGEF1BQ0VAM2 473 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 PNRC1Q12796 327 aaPredicted RBP3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 DMP1Q13316 513 aaPredicted RBP3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 CDH18Q13634 790 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 ZNF268Q14587 947 aaPredicted RBP3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 EFNB3Q15768 340 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 RBBP7Q16576 425 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 DECR1Q16698 335 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 ADPRMQ3LIE5 342 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 MIDNQ504T8 468 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 PHLDA2Q53GA4 152 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 DCAF6Q58WW2 860 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 PAPPA-AS1Q5QFB9 102 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 ELFN2Q5R3F8 820 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 ATF7IP2Q5U623 682 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 ABHD17BQ5VST6 288 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 PRAMEF20Q5VT98 475 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 IL23RQ5VWK5 629 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 LIPKQ5VXJ0 399 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 KIF6Q6ZMV9 814 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 ZNF793Q6ZN11 406 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 EFL1Q7Z2Z2 1120 aaKnown RBP3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 ATG9AQ7Z3C6 839 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 FAM228AQ86W67 206 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 GPSM1Q86YR5 675 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 PSTKQ8IV42 348 aaKnown RBP3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 ARHGEF19Q8IW93 802 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 FOXRED2Q8IWF2 684 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 MMD2Q8IY49 270 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 CDK20Q8IZL9 346 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 BMPERQ8N8U9 685 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 BHLHE23Q8NDY6 225 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 GPRC5AQ8NFJ5 357 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 OR4K1Q8NGD4 311 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 OR52K1Q8NGK4 314 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 PNPT1Q8TCS8 783 aaKnown RBP3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 SLC38A5Q8WUX1 472 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 DNAAF4Q8WXU2 420 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 STARD8Q92502 1023 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 TRIB2Q92519 343 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 PHYHIPQ92561 330 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 VOPP1Q96AW1 172 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 LGALS12Q96DT0 336 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 PGM2Q96G03 612 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 LRR1Q96L50 414 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 BTBD9Q96Q07 612 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 MTERF1Q99551 399 aaKnown RBP3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 CITED1Q99966 193 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 FTHL17Q9BXU8 183 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 GSDMCQ9BYG8 508 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 NMNAT2Q9BZQ4 307 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 RIMS4Q9H426 269 aaPredicted RBP3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 SPAG4Q9NPE6 437 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 SLC2A4RGQ9NR83 387 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 GSN-AS1Q9NRJ2 163 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 FAM207AQ9NSI2 230 aaPredicted RBP3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 DKK2Q9UBU2 259 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 KIAA1257Q9ULG3 409 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 MRPS33Q9Y291 106 aaKnown RBP3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 NCKAP1Q9Y2A7 1128 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 PAM16Q9Y3D7 125 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 KLK4Q9Y5K2 254 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 AP4B1Q9Y6B7 739 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 SF3B1O75533 1304 aaKnown RBP eCLIP3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 CLASP1Q7Z460 1538 aa3.13□□□□□ -1.91
HERPUD1-211ENST00000566550 PTPRTO14522 1441 aa3.12□□□□□ -1.91
HERPUD1-211ENST00000566550 A0A075B6Q4 140 aa3.12□□□□□ -1.91
HERPUD1-211ENST00000566550 TRAV24A0A0B4J272 114 aa3.12□□□□□ -1.91
HERPUD1-211ENST00000566550 HELTA6NFD8 242 aa3.12□□□□□ -1.91
HERPUD1-211ENST00000566550 A6NNC1 897 aa3.12□□□□□ -1.91
HERPUD1-211ENST00000566550 ZNF716A6NP11 495 aa3.12□□□□□ -1.91
HERPUD1-211ENST00000566550 M0QX08 132 aa3.12□□□□□ -1.91
HERPUD1-211ENST00000566550 ITM2AO43736 263 aa3.12□□□□□ -1.91
HERPUD1-211ENST00000566550 JTBO76095 146 aa3.12□□□□□ -1.91
HERPUD1-211ENST00000566550 OR4F21O95013 312 aa3.12□□□□□ -1.91
HERPUD1-211ENST00000566550 PAHP00439 452 aa3.12□□□□□ -1.91
HERPUD1-211ENST00000566550 POLR2MP0CAP2 368 aa3.12□□□□□ -1.91
HERPUD1-211ENST00000566550 ZNF735P0CB33 412 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms