RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 MTMR11A4FU01 709 aa3.9□□□□□ -1.79
CHD9-215ENST00000565442 SDR42E2A6NKP2 422 aa3.9□□□□□ -1.79
CHD9-215ENST00000565442 NPIPA3F8WFD2 350 aa3.9□□□□□ -1.79
CHD9-215ENST00000565442 ZNF263O14978 683 aa3.9□□□□□ -1.79
CHD9-215ENST00000565442 TEX28O15482 410 aa3.9□□□□□ -1.79
CHD9-215ENST00000565442 KHDRBS3O75525 346 aaKnown RBP3.9□□□□□ -1.79
CHD9-215ENST00000565442 SLC16A8O95907 504 aa3.9□□□□□ -1.79
CHD9-215ENST00000565442 PRKAR1AP10644 381 aa3.9□□□□□ -1.79
CHD9-215ENST00000565442 GOT1P17174 413 aa3.9□□□□□ -1.79
CHD9-215ENST00000565442 RPL35AP18077 110 aaKnown RBP3.9□□□□□ -1.79
CHD9-215ENST00000565442 OAS2P29728 719 aaKnown RBP3.9□□□□□ -1.79
CHD9-215ENST00000565442 COPB2P35606 906 aa3.9□□□□□ -1.79
CHD9-215ENST00000565442 LEPRP48357 1165 aaKnown RBP3.9□□□□□ -1.79
CHD9-215ENST00000565442 TAF6P49848 677 aa3.9□□□□□ -1.79
CHD9-215ENST00000565442 CLDN17P56750 224 aa3.9□□□□□ -1.79
CHD9-215ENST00000565442 ASIC1P78348 528 aa3.9□□□□□ -1.79
CHD9-215ENST00000565442 TMEM132DQ14C87 1099 aa3.9□□□□□ -1.79
CHD9-215ENST00000565442 PWWP2BQ6NUJ5 590 aa3.9□□□□□ -1.79
CHD9-215ENST00000565442 NOTCH2NLQ7Z3S9 236 aa3.9□□□□□ -1.79
CHD9-215ENST00000565442 GPR141Q7Z602 305 aa3.9□□□□□ -1.79
CHD9-215ENST00000565442 C5orf24Q7Z6I8 188 aa3.9□□□□□ -1.79
CHD9-215ENST00000565442 PRUNE1Q86TP1 453 aa3.9□□□□□ -1.79
CHD9-215ENST00000565442 SNX32Q86XE0 403 aa3.9□□□□□ -1.79
CHD9-215ENST00000565442 HOGA1Q86XE5 327 aa3.9□□□□□ -1.79
CHD9-215ENST00000565442 AQP12AQ8IXF9 295 aa3.9□□□□□ -1.79
CHD9-215ENST00000565442 CLYBLQ8N0X4 340 aa3.9□□□□□ -1.79
CHD9-215ENST00000565442 SPEM1Q8N4L4 309 aa3.9□□□□□ -1.79
CHD9-215ENST00000565442 PTP4A1Q93096 173 aa3.9□□□□□ -1.79
CHD9-215ENST00000565442 NXPE2Q96DL1 559 aa3.9□□□□□ -1.79
CHD9-215ENST00000565442 GMPPAQ96IJ6 420 aaPredicted RBP3.9□□□□□ -1.79
CHD9-215ENST00000565442 MAGED4Q96JG8 741 aa3.9□□□□□ -1.79
CHD9-215ENST00000565442 DUX3Q96PT4 197 aa3.9□□□□□ -1.79
CHD9-215ENST00000565442 NEDD4LQ96PU5 975 aa3.9□□□□□ -1.79
CHD9-215ENST00000565442 ATG101Q9BSB4 218 aa3.9□□□□□ -1.79
CHD9-215ENST00000565442 NYXQ9GZU5 481 aa3.9□□□□□ -1.79
CHD9-215ENST00000565442 IARS2Q9NSE4 1012 aaKnown RBP3.9□□□□□ -1.79
CHD9-215ENST00000565442 PDRG1Q9NUG6 133 aa3.9□□□□□ -1.79
CHD9-215ENST00000565442 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.9□□□□□ -1.79
CHD9-215ENST00000565442 TBC1D13Q9NVG8 400 aa3.9□□□□□ -1.79
CHD9-215ENST00000565442 C2orf42Q9NWW7 574 aa3.9□□□□□ -1.79
CHD9-215ENST00000565442 TMEM161AQ9NX61 479 aa3.9□□□□□ -1.79
CHD9-215ENST00000565442 RNF186Q9NXI6 227 aa3.9□□□□□ -1.79
CHD9-215ENST00000565442 TMOD3Q9NYL9 352 aa3.9□□□□□ -1.79
CHD9-215ENST00000565442 IL36AQ9UHA7 158 aa3.9□□□□□ -1.79
CHD9-215ENST00000565442 SLC12A6Q9UHW9 1150 aa3.9□□□□□ -1.79
CHD9-215ENST00000565442 LEF1Q9UJU2 399 aaPredicted RBP3.9□□□□□ -1.79
CHD9-215ENST00000565442 AGTPBP1Q9UPW5 1226 aa3.9□□□□□ -1.79
CHD9-215ENST00000565442 PA2G4Q9UQ80 394 aaKnown RBP3.9□□□□□ -1.79
CHD9-215ENST00000565442 COLEC10Q9Y6Z7 277 aa3.9□□□□□ -1.79
CHD9-215ENST00000565442 A0A1B0GVY2 172 aa3.89□□□□□ -1.79
CHD9-215ENST00000565442 A0A1W2PR80 420 aa3.89□□□□□ -1.79
CHD9-215ENST00000565442 ILVBLA1L0T0 632 aa3.89□□□□□ -1.79
CHD9-215ENST00000565442 CRCPO75575 148 aa3.89□□□□□ -1.79
CHD9-215ENST00000565442 YES1P07947 543 aa3.89□□□□□ -1.79
CHD9-215ENST00000565442 CEBPBP17676 345 aa3.89□□□□□ -1.79
CHD9-215ENST00000565442 CYP2A7P20853 494 aa3.89□□□□□ -1.79
CHD9-215ENST00000565442 ELAVL4P26378 380 aaKnown RBP3.89□□□□□ -1.79
CHD9-215ENST00000565442 FRKP42685 505 aaPredicted RBP3.89□□□□□ -1.79
CHD9-215ENST00000565442 NR0B1P51843 470 aaKnown RBP3.89□□□□□ -1.79
CHD9-215ENST00000565442 XGP55808 180 aa3.89□□□□□ -1.79
CHD9-215ENST00000565442 C17orf67Q0P5P2 114 aa3.89□□□□□ -1.79
CHD9-215ENST00000565442 ABRQ12979 859 aa3.89□□□□□ -1.79
CHD9-215ENST00000565442 SGCGQ13326 291 aa3.89□□□□□ -1.79
CHD9-215ENST00000565442 PTPN14Q15678 1187 aa3.89□□□□□ -1.79
CHD9-215ENST00000565442 SMU1Q2TAY7 513 aa3.89□□□□□ -1.79
CHD9-215ENST00000565442 GLRA4Q5JXX5 417 aa3.89□□□□□ -1.79
CHD9-215ENST00000565442 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.89□□□□□ -1.79
CHD9-215ENST00000565442 ZNF770Q6IQ21 691 aaPredicted RBP3.89□□□□□ -1.79
CHD9-215ENST00000565442 LEKR1Q6ZMV7 388 aa3.89□□□□□ -1.79
CHD9-215ENST00000565442 FCRLAQ7L513 359 aa3.89□□□□□ -1.79
CHD9-215ENST00000565442 CCDC83Q8IWF9 413 aa3.89□□□□□ -1.79
CHD9-215ENST00000565442 LSMEM2Q8N112 164 aa3.89□□□□□ -1.79
CHD9-215ENST00000565442 GPC2Q8N158 579 aa3.89□□□□□ -1.79
CHD9-215ENST00000565442 PRSS35Q8N3Z0 413 aa3.89□□□□□ -1.79
CHD9-215ENST00000565442 FAM89BQ8N5H3 189 aa3.89□□□□□ -1.79
CHD9-215ENST00000565442 TCEANCQ8N8B7 351 aa3.89□□□□□ -1.79
CHD9-215ENST00000565442 AMER3Q8N944 861 aa3.89□□□□□ -1.79
CHD9-215ENST00000565442 MRGPRDQ8TDS7 321 aa3.89□□□□□ -1.79
CHD9-215ENST00000565442 ZNF486Q96H40 463 aaPredicted RBP3.89□□□□□ -1.79
CHD9-215ENST00000565442 TSSK2Q96PF2 358 aa3.89□□□□□ -1.79
CHD9-215ENST00000565442 ZNF350Q9GZX5 532 aa3.89□□□□□ -1.79
CHD9-215ENST00000565442 WDR13Q9H1Z4 485 aa3.89□□□□□ -1.79
CHD9-215ENST00000565442 UBQLN3Q9H347 655 aa3.89□□□□□ -1.79
CHD9-215ENST00000565442 C10orf88Q9H8K7 445 aa3.89□□□□□ -1.79
CHD9-215ENST00000565442 PLCXD1Q9NUJ7 323 aa3.89□□□□□ -1.79
CHD9-215ENST00000565442 ATAD3AQ9NVI7 634 aa3.89□□□□□ -1.79
CHD9-215ENST00000565442 NCKAP1Q9Y2A7 1128 aa3.89□□□□□ -1.79
CHD9-215ENST00000565442 A0A087X002 238 aa3.88□□□□□ -1.79
CHD9-215ENST00000565442 A0A0B4J203 849 aa3.88□□□□□ -1.79
CHD9-215ENST00000565442 MEIOCA2RUB1 952 aa3.88□□□□□ -1.79
CHD9-215ENST00000565442 SMIM30A4D0T7 59 aa3.88□□□□□ -1.79
CHD9-215ENST00000565442 PGRMC2O15173 223 aa3.88□□□□□ -1.79
CHD9-215ENST00000565442 KIF5CO60282 957 aa3.88□□□□□ -1.79
CHD9-215ENST00000565442 ACSL4O60488 711 aa3.88□□□□□ -1.79
CHD9-215ENST00000565442 MAGEC1O60732 1142 aa3.88□□□□□ -1.79
CHD9-215ENST00000565442 CLDN1O95832 211 aa3.88□□□□□ -1.79
CHD9-215ENST00000565442 VTNP04004 478 aa3.88□□□□□ -1.79
CHD9-215ENST00000565442 SERPINB2P05120 415 aa3.88□□□□□ -1.79
CHD9-215ENST00000565442 C8orf89P0DMQ9 161 aa3.88□□□□□ -1.79
CHD9-215ENST00000565442 RBMS1P29558 406 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms