RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 CD244Q9BZW8 370 aa18.93■□□□□ 0.62
TSPAN3-210ENST00000561277 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.93■□□□□ 0.62
TSPAN3-210ENST00000561277 V9GYY5 206 aaPredicted RBP18.93■□□□□ 0.62
TSPAN3-210ENST00000561277 UMODP07911 640 aa18.93■□□□□ 0.62
TSPAN3-210ENST00000561277 C1GALT1C1LP0DN25 315 aa18.93■□□□□ 0.62
TSPAN3-210ENST00000561277 GFAPP14136 432 aa18.93■□□□□ 0.62
TSPAN3-210ENST00000561277 IL1RNP18510 177 aa18.93■□□□□ 0.62
TSPAN3-210ENST00000561277 KCNAB2Q13303 367 aa18.93■□□□□ 0.62
TSPAN3-210ENST00000561277 ATP1A4Q13733 1029 aa18.93■□□□□ 0.62
TSPAN3-210ENST00000561277 DSG2Q14126 1118 aa18.93■□□□□ 0.62
TSPAN3-210ENST00000561277 PDK4Q16654 411 aa18.93■□□□□ 0.62
TSPAN3-210ENST00000561277 LGSNQ5TDP6 509 aa18.93■□□□□ 0.62
TSPAN3-210ENST00000561277 TMEM214Q6NUQ4 689 aaKnown RBP18.93■□□□□ 0.62
TSPAN3-210ENST00000561277 SLCO4C1Q6ZQN7 724 aa18.93■□□□□ 0.62
TSPAN3-210ENST00000561277 PRSS41Q7RTY9 318 aa18.93■□□□□ 0.62
TSPAN3-210ENST00000561277 LRRC70Q7Z2Q7 622 aa18.93■□□□□ 0.62
TSPAN3-210ENST00000561277 OR9A4Q8NGU2 314 aa18.93■□□□□ 0.62
TSPAN3-210ENST00000561277 TM4SF19Q96DZ7 209 aa18.93■□□□□ 0.62
TSPAN3-210ENST00000561277 GPR78Q96P69 363 aa18.93■□□□□ 0.62
TSPAN3-210ENST00000561277 SPSB2Q99619 263 aa18.93■□□□□ 0.62
TSPAN3-210ENST00000561277 SLC26A1Q9H2B4 701 aa18.93■□□□□ 0.62
TSPAN3-210ENST00000561277 WDR54Q9H977 334 aa18.93■□□□□ 0.62
TSPAN3-210ENST00000561277 TRPC4Q9UBN4 977 aa18.93■□□□□ 0.62
TSPAN3-210ENST00000561277 ZNF282Q9UDV7 671 aaPredicted RBP18.93■□□□□ 0.62
TSPAN3-210ENST00000561277 ZFP69BQ9UJL9 534 aa18.93■□□□□ 0.62
TSPAN3-210ENST00000561277 TK2O00142 265 aa18.92■□□□□ 0.62
TSPAN3-210ENST00000561277 PRPF4O43172 522 aaKnown RBP eCLIP18.92■□□□□ 0.62
TSPAN3-210ENST00000561277 DNAJB5O75953 348 aa18.92■□□□□ 0.62
TSPAN3-210ENST00000561277 MTHFD2P13995 350 aa18.92■□□□□ 0.62
TSPAN3-210ENST00000561277 SCTRP47872 440 aa18.92■□□□□ 0.62
TSPAN3-210ENST00000561277 AVPR1BP47901 424 aa18.92■□□□□ 0.62
TSPAN3-210ENST00000561277 VSNL1P62760 191 aa18.92■□□□□ 0.62
TSPAN3-210ENST00000561277 MAT1AQ00266 395 aaKnown RBP18.92■□□□□ 0.62
TSPAN3-210ENST00000561277 OCA2Q04671 838 aa18.92■□□□□ 0.62
TSPAN3-210ENST00000561277 FAM53BQ14153 422 aa18.92■□□□□ 0.62
TSPAN3-210ENST00000561277 SLBPQ14493 270 aaKnown RBP eCLIP18.92■□□□□ 0.62
TSPAN3-210ENST00000561277 SSPNQ14714 243 aa18.92■□□□□ 0.62
TSPAN3-210ENST00000561277 SYT16Q17RD7 645 aa18.92■□□□□ 0.62
TSPAN3-210ENST00000561277 TECRLQ5HYJ1 363 aa18.92■□□□□ 0.62
TSPAN3-210ENST00000561277 ADGRD1Q6QNK2 874 aa18.92■□□□□ 0.62
TSPAN3-210ENST00000561277 MRGPREQ86SM8 312 aa18.92■□□□□ 0.62
TSPAN3-210ENST00000561277 AMER3Q8N944 861 aa18.92■□□□□ 0.62
TSPAN3-210ENST00000561277 ANKRD53Q8N9V6 530 aa18.92■□□□□ 0.62
TSPAN3-210ENST00000561277 SCYL1Q96KG9 808 aa18.92■□□□□ 0.62
TSPAN3-210ENST00000561277 CAPS2Q9BXY5 557 aa18.92■□□□□ 0.62
TSPAN3-210ENST00000561277 TRIM55Q9BYV6 548 aa18.92■□□□□ 0.62
TSPAN3-210ENST00000561277 GEMIN8Q9NWZ8 242 aaKnown RBP18.92■□□□□ 0.62
TSPAN3-210ENST00000561277 GPRC5BQ9NZH0 403 aa18.92■□□□□ 0.62
TSPAN3-210ENST00000561277 CPSF2Q9P2I0 782 aaKnown RBP18.92■□□□□ 0.62
TSPAN3-210ENST00000561277 NXT1Q9UKK6 140 aaKnown RBP18.92■□□□□ 0.62
TSPAN3-210ENST00000561277 CLGNO14967 610 aa18.91■□□□□ 0.62
TSPAN3-210ENST00000561277 PFKFB4Q16877 469 aa18.91■□□□□ 0.62
TSPAN3-210ENST00000561277 VWA2Q5GFL6 755 aa18.91■□□□□ 0.62
TSPAN3-210ENST00000561277 STT3BQ8TCJ2 826 aa18.91■□□□□ 0.62
TSPAN3-210ENST00000561277 MIEF2Q96C03 454 aa18.91■□□□□ 0.62
TSPAN3-210ENST00000561277 PSMC3IPQ9P2W1 217 aaPredicted RBP18.91■□□□□ 0.62
TSPAN3-210ENST00000561277 OPTCQ9UBM4 332 aa18.91■□□□□ 0.62
TSPAN3-210ENST00000561277 TBK1Q9UHD2 729 aa18.91■□□□□ 0.62
TSPAN3-210ENST00000561277 MAP2K7O14733 419 aa18.9■□□□□ 0.62
TSPAN3-210ENST00000561277 H2AFYO75367 372 aaKnown RBP18.9■□□□□ 0.62
TSPAN3-210ENST00000561277 RFPL1O75677 317 aa18.9■□□□□ 0.62
TSPAN3-210ENST00000561277 SHBGP04278 402 aa18.9■□□□□ 0.62
TSPAN3-210ENST00000561277 ZGLP1P0C6A0 271 aa18.9■□□□□ 0.62
TSPAN3-210ENST00000561277 AHRP35869 848 aa18.9■□□□□ 0.62
TSPAN3-210ENST00000561277 KLC1Q07866 573 aa18.9■□□□□ 0.62
TSPAN3-210ENST00000561277 XKR6Q5GH73 641 aa18.9■□□□□ 0.62
TSPAN3-210ENST00000561277 ATG9BQ674R7 924 aa18.9■□□□□ 0.62
TSPAN3-210ENST00000561277 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.9■□□□□ 0.62
TSPAN3-210ENST00000561277 UBTD2Q8WUN7 234 aa18.9■□□□□ 0.62
TSPAN3-210ENST00000561277 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.9■□□□□ 0.62
TSPAN3-210ENST00000561277 MTBPQ96DY7 904 aa18.9■□□□□ 0.62
TSPAN3-210ENST00000561277 CCDC77Q9BR77 488 aa18.9■□□□□ 0.62
TSPAN3-210ENST00000561277 CRB3Q9BUF7 120 aa18.9■□□□□ 0.62
TSPAN3-210ENST00000561277 ING2Q9H160 280 aa18.9■□□□□ 0.62
TSPAN3-210ENST00000561277 ADNPQ9H2P0 1102 aa18.9■□□□□ 0.62
TSPAN3-210ENST00000561277 ANKHQ9HCJ1 492 aa18.9■□□□□ 0.62
TSPAN3-210ENST00000561277 ACSS2Q9NR19 701 aa18.9■□□□□ 0.62
TSPAN3-210ENST00000561277 XPR1Q9UBH6 696 aa18.9■□□□□ 0.62
TSPAN3-210ENST00000561277 PCSK5Q92824 1860 aa18.9■□□□□ 0.62
TSPAN3-210ENST00000561277 CCDC189A1A4V9 331 aa18.89■□□□□ 0.62
TSPAN3-210ENST00000561277 VSTM2BA6NLU5 285 aa18.89■□□□□ 0.62
TSPAN3-210ENST00000561277 K7EPI3 171 aa18.89■□□□□ 0.62
TSPAN3-210ENST00000561277 SGK494L7N484 410 aa18.89■□□□□ 0.62
TSPAN3-210ENST00000561277 PRAMEF4O60810 478 aa18.89■□□□□ 0.62
TSPAN3-210ENST00000561277 NSA2O95478 260 aaKnown RBP18.89■□□□□ 0.62
TSPAN3-210ENST00000561277 EPORP19235 508 aa18.89■□□□□ 0.62
TSPAN3-210ENST00000561277 CXCR2P25025 360 aa18.89■□□□□ 0.62
TSPAN3-210ENST00000561277 HNF4AP41235 474 aa18.89■□□□□ 0.62
TSPAN3-210ENST00000561277 RGS1Q08116 209 aa18.89■□□□□ 0.62
TSPAN3-210ENST00000561277 PWP1Q13610 501 aa18.89■□□□□ 0.62
TSPAN3-210ENST00000561277 SETDB1Q15047 1291 aa18.89■□□□□ 0.62
TSPAN3-210ENST00000561277 TSNAXIP1Q2TAA8 658 aa18.89■□□□□ 0.62
TSPAN3-210ENST00000561277 PRAMEF9Q5VWM5 478 aa18.89■□□□□ 0.62
TSPAN3-210ENST00000561277 PPP1R32Q7Z5V6 425 aa18.89■□□□□ 0.62
TSPAN3-210ENST00000561277 TRPV3Q8NET8 790 aa18.89■□□□□ 0.62
TSPAN3-210ENST00000561277 HCN3Q9P1Z3 774 aa18.89■□□□□ 0.62
TSPAN3-210ENST00000561277 FETUBQ9UGM5 382 aa18.89■□□□□ 0.62
TSPAN3-210ENST00000561277 NAALAD2Q9Y3Q0 740 aa18.89■□□□□ 0.62
TSPAN3-210ENST00000561277 MAP4K5Q9Y4K4 846 aa18.89■□□□□ 0.62
TSPAN3-210ENST00000561277 IQANK1A0A1B0GTG1 560 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms