RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 ABATP80404 500 aa11.52□□□□□ -0.57
HMGB1P8-201ENST00000558211 MEF2AQ02078 507 aaPredicted RBP11.52□□□□□ -0.57
HMGB1P8-201ENST00000558211 CDC16Q13042 620 aa11.52□□□□□ -0.57
HMGB1P8-201ENST00000558211 PCBP2Q15366 365 aaKnown RBP eCLIP11.52□□□□□ -0.57
HMGB1P8-201ENST00000558211 PDK4Q16654 411 aa11.52□□□□□ -0.57
HMGB1P8-201ENST00000558211 DEFB110Q30KQ9 67 aa11.52□□□□□ -0.57
HMGB1P8-201ENST00000558211 TMTC4Q5T4D3 741 aa11.52□□□□□ -0.57
HMGB1P8-201ENST00000558211 LRRC70Q7Z2Q7 622 aa11.52□□□□□ -0.57
HMGB1P8-201ENST00000558211 TMPRSS11BQ86T26 416 aa11.52□□□□□ -0.57
HMGB1P8-201ENST00000558211 PLD3Q8IV08 490 aa11.52□□□□□ -0.57
HMGB1P8-201ENST00000558211 SLC22A9Q8IVM8 553 aa11.52□□□□□ -0.57
HMGB1P8-201ENST00000558211 C10orf107Q8IVU9 208 aa11.52□□□□□ -0.57
HMGB1P8-201ENST00000558211 CCNYL1Q8N7R7 359 aa11.52□□□□□ -0.57
HMGB1P8-201ENST00000558211 AGBL5Q8NDL9 886 aa11.52□□□□□ -0.57
HMGB1P8-201ENST00000558211 MGARPQ8TDB4 240 aa11.52□□□□□ -0.57
HMGB1P8-201ENST00000558211 UBTD2Q8WUN7 234 aa11.52□□□□□ -0.57
HMGB1P8-201ENST00000558211 SLC5A11Q8WWX8 675 aa11.52□□□□□ -0.57
HMGB1P8-201ENST00000558211 KLHL6Q8WZ60 621 aa11.52□□□□□ -0.57
HMGB1P8-201ENST00000558211 N4BP2L2Q92802 583 aaPredicted RBP11.52□□□□□ -0.57
HMGB1P8-201ENST00000558211 ATP6V1E2Q96A05 226 aa11.52□□□□□ -0.57
HMGB1P8-201ENST00000558211 ZUFSPQ96AP4 578 aa11.52□□□□□ -0.57
HMGB1P8-201ENST00000558211 RNF31Q96EP0 1072 aa11.52□□□□□ -0.57
HMGB1P8-201ENST00000558211 CMKLR1Q99788 373 aa11.52□□□□□ -0.57
HMGB1P8-201ENST00000558211 SH3GL2Q99962 352 aa11.52□□□□□ -0.57
HMGB1P8-201ENST00000558211 MECRQ9BV79 373 aa11.52□□□□□ -0.57
HMGB1P8-201ENST00000558211 TMPRSS13Q9BYE2 586 aa11.52□□□□□ -0.57
HMGB1P8-201ENST00000558211 FAM60AQ9NP50 221 aa11.52□□□□□ -0.57
HMGB1P8-201ENST00000558211 SSU72Q9NP77 194 aaKnown RBP11.52□□□□□ -0.57
HMGB1P8-201ENST00000558211 TPSG1Q9NRR2 321 aa11.52□□□□□ -0.57
HMGB1P8-201ENST00000558211 COPG2Q9UBF2 871 aa11.52□□□□□ -0.57
HMGB1P8-201ENST00000558211 PISDQ9UG56 409 aa11.52□□□□□ -0.57
HMGB1P8-201ENST00000558211 MID2Q9UJV3 735 aa11.52□□□□□ -0.57
HMGB1P8-201ENST00000558211 SNX7Q9UNH6 387 aa11.52□□□□□ -0.57
HMGB1P8-201ENST00000558211 TNPO3Q9Y5L0 923 aaKnown RBP11.52□□□□□ -0.57
HMGB1P8-201ENST00000558211 MDC1Q14676 2089 aaKnown RBP11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 IGKV1-8A0A0C4DH67 115 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 A0A0J9YVX5 310 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 FEZF1A0PJY2 475 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 TMEM120BA0PK00 339 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 E7EQ34 232 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 STX16-NPEPL1H3BU86 382 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 STX16O14662 325 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 HGSO14964 777 aaPredicted RBP11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 PRPF4O43172 522 aaKnown RBP eCLIP11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 FKBP9O95302 570 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 ANKRD34CP0C6C1 535 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 JMJD7P0C870 316 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 FOLR1P15328 257 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 GNAZP19086 355 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 ALDH3A1P30838 453 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 PRKAA2P54646 552 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 CDH13P55290 713 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 CYP4F3Q08477 520 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 GTF2H2Q13888 395 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 COL9A2Q14055 689 aaPredicted RBP11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 MPP2Q14168 576 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 PCLAFQ15004 111 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 GPR19Q15760 415 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 RBBP7Q16576 425 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 UNC50Q53HI1 259 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 XKR6Q5GH73 641 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 ZNF678Q5SXM1 525 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 GTF2H2CQ6P1K8 395 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 ERMP1Q7Z2K6 904 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 GOLGA7Q7Z5G4 137 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 KMT5CQ86Y97 462 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 MYLK4Q86YV6 388 aaPredicted RBP11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 KLHDC8AQ8IYD2 350 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 WDR36Q8NI36 951 aaKnown RBP11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 RDH11Q8TC12 318 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 CCDC126Q96EE4 140 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 TCTN2Q96GX1 697 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 LIN37Q96GY3 246 aaPredicted RBP11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 SLC41A2Q96JW4 573 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 PKNOX2Q96KN3 472 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 FCRL4Q96PJ5 515 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 TMEM237Q96Q45 408 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 OR6C1Q96RD1 312 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 CTRCQ99895 268 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 PLCD4Q9BRC7 762 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 SCNM1Q9BWG6 230 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 SEMA4BQ9NPR2 832 aaPredicted RBP11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 TMEM184CQ9NVA4 438 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 IRAK4Q9NWZ3 460 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 SEMA5BQ9P283 1151 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 KLK13Q9UKR3 277 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 SATB2Q9UPW6 733 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 PCDHGB7Q9Y5F8 929 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 SPEGQ15772 3267 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 SPTBP11277 2137 aa11.51□□□□□ -0.57
HMGB1P8-201ENST00000558211 HMGB1P1B2RPK0 211 aaPredicted RBP11.5□□□□□ -0.57
HMGB1P8-201ENST00000558211 TMEM150CB9EJG8 249 aa11.5□□□□□ -0.57
HMGB1P8-201ENST00000558211 E2F3O00716 465 aa11.5□□□□□ -0.57
HMGB1P8-201ENST00000558211 HAT1O14929 419 aa11.5□□□□□ -0.57
HMGB1P8-201ENST00000558211 TM9SF1O15321 606 aa11.5□□□□□ -0.57
HMGB1P8-201ENST00000558211 HCRTR1O43613 425 aa11.5□□□□□ -0.57
HMGB1P8-201ENST00000558211 CTSVO60911 334 aa11.5□□□□□ -0.57
HMGB1P8-201ENST00000558211 H2AFYO75367 372 aaKnown RBP11.5□□□□□ -0.57
HMGB1P8-201ENST00000558211 KATNA1O75449 491 aa11.5□□□□□ -0.57
HMGB1P8-201ENST00000558211 ZWINTO95229 277 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms