RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 GRK3P35626 688 aa17.76■□□□□ 0.43
CDKN3-209ENST00000556102 TIAL1Q01085 375 aaKnown RBP eCLIP17.76■□□□□ 0.43
CDKN3-209ENST00000556102 NAE1Q13564 534 aa17.76■□□□□ 0.43
CDKN3-209ENST00000556102 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.76■□□□□ 0.43
CDKN3-209ENST00000556102 H3F3CQ6NXT2 135 aa17.76■□□□□ 0.43
CDKN3-209ENST00000556102 LCTLQ6UWM7 567 aa17.76■□□□□ 0.43
CDKN3-209ENST00000556102 PPIL6Q8IXY8 311 aa17.76■□□□□ 0.43
CDKN3-209ENST00000556102 SHISA5Q8N114 240 aa17.76■□□□□ 0.43
CDKN3-209ENST00000556102 MYO1HQ8N1T3 1032 aa17.76■□□□□ 0.43
CDKN3-209ENST00000556102 KCT2Q8NC54 265 aa17.76■□□□□ 0.43
CDKN3-209ENST00000556102 GABPB2Q8TAK5 448 aaPredicted RBP17.76■□□□□ 0.43
CDKN3-209ENST00000556102 GRK7Q8WTQ7 553 aa17.76■□□□□ 0.43
CDKN3-209ENST00000556102 SLC13A3Q8WWT9 602 aa17.76■□□□□ 0.43
CDKN3-209ENST00000556102 NDNQ99608 321 aa17.76■□□□□ 0.43
CDKN3-209ENST00000556102 SGPP1Q9BX95 441 aa17.76■□□□□ 0.43
CDKN3-209ENST00000556102 ATG10Q9H0Y0 220 aa17.76■□□□□ 0.43
CDKN3-209ENST00000556102 JRKLQ9Y4A0 524 aa17.76■□□□□ 0.43
CDKN3-209ENST00000556102 TRGV8A0A0C4DH27 118 aa17.75■□□□□ 0.43
CDKN3-209ENST00000556102 FEZF1A0PJY2 475 aa17.75■□□□□ 0.43
CDKN3-209ENST00000556102 PGRMC1O00264 195 aaKnown RBP17.75■□□□□ 0.43
CDKN3-209ENST00000556102 LCMT2O60294 686 aaKnown RBP17.75■□□□□ 0.43
CDKN3-209ENST00000556102 RDH16O75452 317 aa17.75■□□□□ 0.43
CDKN3-209ENST00000556102 SLC35G6P0C7Q6 338 aa17.75■□□□□ 0.43
CDKN3-209ENST00000556102 PGAM1P18669 254 aa17.75■□□□□ 0.43
CDKN3-209ENST00000556102 ART3Q13508 389 aa17.75■□□□□ 0.43
CDKN3-209ENST00000556102 CRYMQ14894 314 aa17.75■□□□□ 0.43
CDKN3-209ENST00000556102 EXT1Q16394 746 aa17.75■□□□□ 0.43
CDKN3-209ENST00000556102 ZNF766Q5HY98 468 aa17.75■□□□□ 0.43
CDKN3-209ENST00000556102 ACER2Q5QJU3 275 aa17.75■□□□□ 0.43
CDKN3-209ENST00000556102 CAPN13Q6MZZ7 669 aaPredicted RBP17.75■□□□□ 0.43
CDKN3-209ENST00000556102 SLC26A11Q86WA9 606 aa17.75■□□□□ 0.43
CDKN3-209ENST00000556102 PDSS2Q86YH6 399 aa17.75■□□□□ 0.43
CDKN3-209ENST00000556102 SRRM1Q8IYB3 904 aaKnown RBP17.75■□□□□ 0.43
CDKN3-209ENST00000556102 BEST3Q8N1M1 668 aa17.75■□□□□ 0.43
CDKN3-209ENST00000556102 ITLN2Q8WWU7 325 aaPredicted RBP17.75■□□□□ 0.43
CDKN3-209ENST00000556102 ALKBH8Q96BT7 664 aaKnown RBP17.75■□□□□ 0.43
CDKN3-209ENST00000556102 KCNK13Q9HB14 408 aa17.75■□□□□ 0.43
CDKN3-209ENST00000556102 PCDHGB6Q9Y5F9 930 aa17.75■□□□□ 0.43
CDKN3-209ENST00000556102 SLC22A7Q9Y694 548 aa17.75■□□□□ 0.43
CDKN3-209ENST00000556102 OR2W5A6NFC9 320 aa17.74■□□□□ 0.43
CDKN3-209ENST00000556102 NRDCO43847 1150 aa17.74■□□□□ 0.43
CDKN3-209ENST00000556102 CDH1P12830 882 aa17.74■□□□□ 0.43
CDKN3-209ENST00000556102 IL10P22301 178 aa17.74■□□□□ 0.43
CDKN3-209ENST00000556102 CA7P43166 264 aa17.74■□□□□ 0.43
CDKN3-209ENST00000556102 FNTAP49354 379 aa17.74■□□□□ 0.43
CDKN3-209ENST00000556102 PMP22Q01453 160 aa17.74■□□□□ 0.43
CDKN3-209ENST00000556102 RBPJQ06330 500 aa17.74■□□□□ 0.43
CDKN3-209ENST00000556102 DHX9Q08211 1270 aaKnown RBP17.74■□□□□ 0.43
CDKN3-209ENST00000556102 NAA30Q147X3 362 aaPredicted RBP17.74■□□□□ 0.43
CDKN3-209ENST00000556102 RNASEH2BQ5TBB1 312 aaKnown RBP17.74■□□□□ 0.43
CDKN3-209ENST00000556102 FCRLBQ6BAA4 426 aa17.74■□□□□ 0.43
CDKN3-209ENST00000556102 PAQR3Q6TCH7 311 aa17.74■□□□□ 0.43
CDKN3-209ENST00000556102 MFSD9Q8NBP5 474 aa17.74■□□□□ 0.43
CDKN3-209ENST00000556102 PLPP5Q8NEB5 264 aa17.74■□□□□ 0.43
CDKN3-209ENST00000556102 M1APQ8TC57 530 aa17.74■□□□□ 0.43
CDKN3-209ENST00000556102 LINGO1Q96FE5 620 aa17.74■□□□□ 0.43
CDKN3-209ENST00000556102 CCDC120Q96HB5 630 aa17.74■□□□□ 0.43
CDKN3-209ENST00000556102 HAUS8Q9BT25 410 aa17.74■□□□□ 0.43
CDKN3-209ENST00000556102 UNKQ9C0B0 810 aaKnown RBP17.74■□□□□ 0.43
CDKN3-209ENST00000556102 MMP25Q9NPA2 562 aa17.74■□□□□ 0.43
CDKN3-209ENST00000556102 NAALAD2Q9Y3Q0 740 aa17.74■□□□□ 0.43
CDKN3-209ENST00000556102 KLF2Q9Y5W3 355 aaPredicted RBP17.74■□□□□ 0.43
CDKN3-209ENST00000556102 APCP25054 2843 aa17.73■□□□□ 0.43
CDKN3-209ENST00000556102 CCL21O00585 134 aa17.73■□□□□ 0.43
CDKN3-209ENST00000556102 TTC4O95801 387 aa17.73■□□□□ 0.43
CDKN3-209ENST00000556102 HIST1H2AGP0C0S8 130 aaPredicted RBP17.73■□□□□ 0.43
CDKN3-209ENST00000556102 PRF1P14222 555 aa17.73■□□□□ 0.43
CDKN3-209ENST00000556102 NPPBP16860 134 aa17.73■□□□□ 0.43
CDKN3-209ENST00000556102 HIST1H2ADP20671 130 aa17.73■□□□□ 0.43
CDKN3-209ENST00000556102 GABRB3P28472 473 aa17.73■□□□□ 0.43
CDKN3-209ENST00000556102 CDKN2DP55273 166 aa17.73■□□□□ 0.43
CDKN3-209ENST00000556102 RHAGQ02094 409 aa17.73■□□□□ 0.43
CDKN3-209ENST00000556102 SRSF11Q05519 484 aaKnown RBP17.73■□□□□ 0.43
CDKN3-209ENST00000556102 TUBA3CQ13748 450 aa17.73■□□□□ 0.43
CDKN3-209ENST00000556102 PHKG1Q16816 387 aa17.73■□□□□ 0.43
CDKN3-209ENST00000556102 MEP1AQ16819 746 aa17.73■□□□□ 0.43
CDKN3-209ENST00000556102 SFT2D3Q587I9 215 aa17.73■□□□□ 0.43
CDKN3-209ENST00000556102 RBM20Q5T481 1227 aaKnown RBP17.73■□□□□ 0.43
CDKN3-209ENST00000556102 MTFR2Q6P444 385 aa17.73■□□□□ 0.43
CDKN3-209ENST00000556102 TUBA3EQ6PEY2 450 aa17.73■□□□□ 0.43
CDKN3-209ENST00000556102 PAPD4Q6PIY7 484 aaKnown RBP17.73■□□□□ 0.43
CDKN3-209ENST00000556102 CRLF3Q8IUI8 442 aa17.73■□□□□ 0.43
CDKN3-209ENST00000556102 MDS2Q8NDY4 140 aa17.73■□□□□ 0.43
CDKN3-209ENST00000556102 PEX11GQ96HA9 241 aa17.73■□□□□ 0.43
CDKN3-209ENST00000556102 HIST1H2AHQ96KK5 128 aa17.73■□□□□ 0.43
CDKN3-209ENST00000556102 OR1F2PQ96R84 312 aa17.73■□□□□ 0.43
CDKN3-209ENST00000556102 HIST1H2AJQ99878 128 aa17.73■□□□□ 0.43
CDKN3-209ENST00000556102 H2AFJQ9BTM1 129 aa17.73■□□□□ 0.43
CDKN3-209ENST00000556102 SARGQ9BW04 601 aa17.73■□□□□ 0.43
CDKN3-209ENST00000556102 RUBCNLQ9H714 662 aa17.73■□□□□ 0.43
CDKN3-209ENST00000556102 LANCL2Q9NS86 450 aa17.73■□□□□ 0.43
CDKN3-209ENST00000556102 PKDREJQ9NTG1 2253 aa17.72■□□□□ 0.43
CDKN3-209ENST00000556102 GOLGA6L10A0A0M3HER8 536 aa17.72■□□□□ 0.43
CDKN3-209ENST00000556102 ZNF860A6NHJ4 632 aa17.72■□□□□ 0.43
CDKN3-209ENST00000556102 MAGEB17A8MXT2 336 aa17.72■□□□□ 0.43
CDKN3-209ENST00000556102 TTI1O43156 1089 aa17.72■□□□□ 0.43
CDKN3-209ENST00000556102 CCR8P51685 355 aa17.72■□□□□ 0.43
CDKN3-209ENST00000556102 ACTN3Q08043 901 aaPredicted RBP17.72■□□□□ 0.43
CDKN3-209ENST00000556102 ABRAXAS2Q15018 415 aa17.72■□□□□ 0.43
CDKN3-209ENST00000556102 HERC3Q15034 1050 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms