RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 TMIGD1Q6UXZ0 262 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 TMPRSS11BQ86T26 416 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 PLD3Q8IV08 490 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 ARHGEF39Q8N4T4 335 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 ENDOVQ8N8Q3 282 aaKnown RBP8.89□□□□□ -0.99
CHD8-206ENST00000553870 SNX31Q8N9S9 440 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 OR2Y1Q8NGV0 311 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 NT5CQ8TCD5 201 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 COL26A1Q96A83 441 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 ESAMQ96AP7 390 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 VPS50Q96JG6 964 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 SCYL1Q96KG9 808 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 UBL7Q96S82 380 aaPredicted RBP8.89□□□□□ -0.99
CHD8-206ENST00000553870 TMEM109Q9BVC6 243 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 DRC3Q9H069 523 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 RHBGQ9H310 441 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 ACTL8Q9H568 366 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 SLC22A11Q9NSA0 550 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 GEMIN8Q9NWZ8 242 aaKnown RBP8.89□□□□□ -0.99
CHD8-206ENST00000553870 ADGRE2Q9UHX3 823 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 TSC22D4Q9Y3Q8 395 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 ANGPTL3Q9Y5C1 460 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 CELSR3Q9NYQ7 3312 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 FEZF1A0PJY2 475 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 VSTM2BA6NLU5 285 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 TK2O00142 265 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 CLEC3AO75596 197 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 KLF7O75840 302 aaPredicted RBP8.88□□□□□ -0.99
CHD8-206ENST00000553870 CYC1P08574 325 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 PYGBP11216 843 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 SFTPCP11686 197 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 KRT15P19012 456 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 IL10P22301 178 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 SERPINB1P30740 379 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 CRHR1P34998 444 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 GMPRP36959 345 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 HNF4AP41235 474 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 FOLR3P41439 243 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 AGTR2P50052 363 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 NAA20P61599 178 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 STXBP1P61764 594 aaKnown RBP8.88□□□□□ -0.99
CHD8-206ENST00000553870 IRF8Q02556 426 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 OCA2Q04671 838 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 IFFO1Q0D2I5 559 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 CDC20Q12834 499 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 CHIT1Q13231 466 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 DSG2Q14126 1118 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 DOC2AQ14183 400 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 ERV3-1Q14264 604 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 SLBPQ14493 270 aaKnown RBP eCLIP8.88□□□□□ -0.99
CHD8-206ENST00000553870 RBBP5Q15291 538 aaKnown RBP8.88□□□□□ -0.99
CHD8-206ENST00000553870 XKR6Q5GH73 641 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 C10orf62Q5T681 223 aaPredicted RBP8.88□□□□□ -0.99
CHD8-206ENST00000553870 LIPJQ5W064 366 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 C16orf46Q6P387 395 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 SH2D5Q6ZV89 423 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 ABHD13Q7L211 337 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 CROCCP2Q86T23 111 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 RAB43Q86YS6 212 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 TMEM151AQ8N4L1 468 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 ZNF740Q8NDX6 193 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 CREB3L4Q8TEY5 395 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 EXT2Q93063 718 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 MAGEB10Q96LZ2 347 aaPredicted RBP8.88□□□□□ -0.99
CHD8-206ENST00000553870 C10orf90Q96M02 699 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 C1QTNF3Q9BXJ4 246 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 TGIF2Q9GZN2 237 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 SYNPO2LQ9H987 977 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 ANKHQ9HCJ1 492 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 MKKSQ9NPJ1 570 aaPredicted RBP8.88□□□□□ -0.99
CHD8-206ENST00000553870 ZNF358Q9NW07 568 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 CPSF2Q9P2I0 782 aaKnown RBP8.88□□□□□ -0.99
CHD8-206ENST00000553870 XPR1Q9UBH6 696 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 ZNF282Q9UDV7 671 aaPredicted RBP8.88□□□□□ -0.99
CHD8-206ENST00000553870 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.88□□□□□ -0.99
CHD8-206ENST00000553870 TBK1Q9UHD2 729 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 GRID1Q9ULK0 1009 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 POLHQ9Y253 713 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 MAP4K5Q9Y4K4 846 aa8.88□□□□□ -0.99
CHD8-206ENST00000553870 V9GYY5 206 aaPredicted RBP8.88□□□□□ -0.99
CHD8-206ENST00000553870 KMT2BQ9UMN6 2715 aaPredicted RBP8.88□□□□□ -0.99
CHD8-206ENST00000553870 LAMA5O15230 3695 aa8.87□□□□□ -0.99
CHD8-206ENST00000553870 MDC1Q14676 2089 aaKnown RBP8.87□□□□□ -0.99
CHD8-206ENST00000553870 ANKDD1BA6NHY2 528 aa8.87□□□□□ -0.99
CHD8-206ENST00000553870 P2RX6O15547 441 aa8.87□□□□□ -0.99
CHD8-206ENST00000553870 NDUFS4O43181 175 aa8.87□□□□□ -0.99
CHD8-206ENST00000553870 FOXS1O43638 330 aa8.87□□□□□ -0.99
CHD8-206ENST00000553870 GLRA3O75311 464 aa8.87□□□□□ -0.99
CHD8-206ENST00000553870 ERLIN1O75477 346 aa8.87□□□□□ -0.99
CHD8-206ENST00000553870 MED26O95402 600 aa8.87□□□□□ -0.99
CHD8-206ENST00000553870 ALOX12P18054 663 aa8.87□□□□□ -0.99
CHD8-206ENST00000553870 EPORP19235 508 aa8.87□□□□□ -0.99
CHD8-206ENST00000553870 FBLP22087 321 aaKnown RBP8.87□□□□□ -0.99
CHD8-206ENST00000553870 VARSP26640 1264 aaKnown RBP8.87□□□□□ -0.99
CHD8-206ENST00000553870 CCR10P46092 362 aa8.87□□□□□ -0.99
CHD8-206ENST00000553870 SLCO1A2P46721 670 aa8.87□□□□□ -0.99
CHD8-206ENST00000553870 OR1D4P47884 311 aa8.87□□□□□ -0.99
CHD8-206ENST00000553870 NFKB2Q00653 900 aa8.87□□□□□ -0.99
CHD8-206ENST00000553870 MEF2AQ02078 507 aaPredicted RBP8.87□□□□□ -0.99
CHD8-206ENST00000553870 SLC18A2Q05940 514 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms