RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 SYVN1Q86TM6 617 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 PAQR7Q86WK9 346 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 RAB43Q86YS6 212 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 CEP97Q8IW35 865 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 CSNK1A1LQ8N752 337 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 EIF1ADQ8N9N8 165 aaKnown RBP7.97□□□□□ -1.13
PSEN1-209ENST00000553855 CAMKVQ8NCB2 501 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 UHMK1Q8TAS1 419 aaKnown RBP7.97□□□□□ -1.13
PSEN1-209ENST00000553855 SNRNP27Q8WVK2 155 aaKnown RBP7.97□□□□□ -1.13
PSEN1-209ENST00000553855 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.97□□□□□ -1.13
PSEN1-209ENST00000553855 WBP1Q96G27 269 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 PRAP1Q96NZ9 151 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 MDFIQ99750 246 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 YIPF2Q9BWQ6 316 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 VPS11Q9H270 941 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 CHST8Q9H2A9 424 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 L2HGDHQ9H9P8 463 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 PCMTD2Q9NV79 361 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 DHCR7Q9UBM7 475 aaKnown RBP7.97□□□□□ -1.13
PSEN1-209ENST00000553855 IL17BQ9UHF5 180 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 POLHQ9Y253 713 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 PCDHGA6Q9Y5G7 932 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 KIF26BQ2KJY2 2108 aa7.96□□□□□ -1.13
PSEN1-209ENST00000553855 IQANK1A0A1B0GTG1 560 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 CCDC189A1A4V9 331 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 HYKKA2RU49 373 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 URADA6NGE7 173 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 SUPT3HB4E1H0 165 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 H0YGG7 62 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 PEX12O00623 359 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 CLGNO14967 610 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 DSCR3O14972 297 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 NKX2-8O15522 239 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 ZNF500O60304 480 aaPredicted RBP7.96□□□□□ -1.14
PSEN1-209ENST00000553855 SUPT3HO75486 399 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 FAM155BO75949 473 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 IPO13O94829 963 aaKnown RBP7.96□□□□□ -1.14
PSEN1-209ENST00000553855 WDR47O94967 919 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 IGHEP01854 428 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 ABHD2P08910 425 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 SLC35G6P0C7Q6 338 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 CD1DP15813 335 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 TFEBP19484 476 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 EPHA1P21709 976 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 RORAP35398 523 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 FOLR3P41439 243 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 AVPR1BP47901 424 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 GABRA4P48169 554 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 PGGT1BP53609 377 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 ARF3P61204 181 aaPredicted RBP7.96□□□□□ -1.14
PSEN1-209ENST00000553855 OCA2Q04671 838 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 CDC20Q12834 499 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 SRSF6Q13247 344 aaKnown RBP7.96□□□□□ -1.14
PSEN1-209ENST00000553855 BMPR2Q13873 1038 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 EFTUD2Q15029 972 aaKnown RBP eCLIP7.96□□□□□ -1.14
PSEN1-209ENST00000553855 NCF4Q15080 339 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 ZKSCAN8Q15776 578 aaPredicted RBP7.96□□□□□ -1.14
PSEN1-209ENST00000553855 HIST2H2ACQ16777 129 aaPredicted RBP7.96□□□□□ -1.14
PSEN1-209ENST00000553855 DEFB109BQ30KR1 87 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 NKAIN1Q4KMZ8 207 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 CDKL4Q5MAI5 379 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 GARNL3Q5VVW2 1013 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 HIST2H2AA3Q6FI13 130 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 SULT1C3Q6IMI6 304 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 SBSNQ6UWP8 590 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 TMEM207Q6UWW9 146 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 MBOAT1Q6ZNC8 495 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 CMC1Q7Z7K0 106 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 THOC6Q86W42 341 aaKnown RBP7.96□□□□□ -1.14
PSEN1-209ENST00000553855 KRT78Q8N1N4 520 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 ENDOVQ8N8Q3 282 aaKnown RBP7.96□□□□□ -1.14
PSEN1-209ENST00000553855 SNX31Q8N9S9 440 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 LSM14AQ8ND56 463 aaKnown RBP7.96□□□□□ -1.14
PSEN1-209ENST00000553855 OR56A3Q8NH54 315 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 ANKRD49Q8WVL7 239 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 SLC5A11Q8WWX8 675 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 THAP4Q8WY91 577 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 EXT2Q93063 718 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 KIAA1191Q96A73 305 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 PYCR2Q96C36 320 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 SCYL1Q96KG9 808 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 IP6K3Q96PC2 410 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 PAFAH2Q99487 392 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 AIF1LQ9BQI0 150 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 MCMBPQ9BTE3 642 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 SGPP1Q9BX95 441 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 UNKQ9C0B0 810 aaKnown RBP7.96□□□□□ -1.14
PSEN1-209ENST00000553855 ACTL8Q9H568 366 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 ALG9Q9H6U8 611 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 ZNF304Q9HCX3 659 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 SLC6A20Q9NP91 592 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 SNX15Q9NRS6 342 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 NUDT4Q9NZJ9 180 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 NXT1Q9UKK6 140 aaKnown RBP7.96□□□□□ -1.14
PSEN1-209ENST00000553855 MAN2B2Q9Y2E5 1009 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 ANGPTL3Q9Y5C1 460 aa7.96□□□□□ -1.14
PSEN1-209ENST00000553855 A0A096LPK6 155 aa7.95□□□□□ -1.14
PSEN1-209ENST00000553855 HAT1O14929 419 aa7.95□□□□□ -1.14
PSEN1-209ENST00000553855 OR1F1O43749 312 aa7.95□□□□□ -1.14
PSEN1-209ENST00000553855 CCNT2O60583 730 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms