RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 TLE2Q04725 743 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 SLC13A2Q13183 592 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 TBCEQ15813 527 aaPredicted RBP7.11□□□□□ -1.27
BEST3-212ENST00000553096 SGCAQ16586 387 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 LRRC26Q2I0M4 334 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 FBXO48Q5FWF7 155 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 FAM209BQ5JX69 171 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 COLEC12Q5KU26 742 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 SNAP47Q5SQN1 464 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 TPRG1LQ5T0D9 272 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 LRIF1Q5T3J3 769 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 RSBN1Q5VWQ0 802 aaPredicted RBP7.11□□□□□ -1.27
BEST3-212ENST00000553096 GCNT7Q6ZNI0 430 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 MSANTD1Q6ZTZ1 278 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 GLT6D1Q7Z4J2 308 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 HEATR4Q86WZ0 1026 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 HORMAD1Q86X24 394 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 NAT16Q8N8M0 369 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 OR52B6Q8NGF0 335 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 CD200R1Q8TD46 325 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 ITCHQ96J02 903 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 OR52E6Q96RD3 313 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 CPPED1Q9BRF8 314 aaPredicted RBP7.11□□□□□ -1.27
BEST3-212ENST00000553096 TBCDQ9BTW9 1192 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 APOL5Q9BWW9 433 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 ZNF221Q9UK13 617 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 TBX21Q9UL17 535 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 GRIP1Q9Y3R0 1128 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 PRKAB1Q9Y478 270 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 GFRA2O00451 464 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 AXIN1O15169 862 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 DPM1O60762 260 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 SEC22BO75396 215 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 CCNKO75909 580 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 CYP17A1P05093 508 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 RPLP0P05388 317 aaKnown RBP7.11□□□□□ -1.27
BEST3-212ENST00000553096 HOXB1P14653 301 aaPredicted RBP7.11□□□□□ -1.27
BEST3-212ENST00000553096 M6PRP20645 277 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 SOX6P35712 828 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 KRT6CP48668 564 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 OLR1P78380 273 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 IFITM2Q01629 132 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 TAGLNQ01995 201 aaKnown RBP7.11□□□□□ -1.27
BEST3-212ENST00000553096 TEKQ02763 1124 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.11□□□□□ -1.27
BEST3-212ENST00000553096 TTLL9Q3SXZ7 439 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 RFTN2Q52LD8 501 aaPredicted RBP7.11□□□□□ -1.27
BEST3-212ENST00000553096 TOR1AIP1Q5JTV8 583 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 AGAP6Q5VW22 663 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 ERICH5Q6P6B1 374 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 LINGO4Q6UY18 593 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 TMPRSS9Q7Z410 1059 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 ZER1Q7Z7L7 766 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 GALNT5Q7Z7M9 940 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 CYP4Z1Q86W10 505 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 P3H2Q8IVL5 708 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 MSRB3Q8IXL7 192 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 C7orf61Q8IZ16 206 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 OR8H2Q8N162 312 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 SLC39A11Q8N1S5 342 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 DEPDC4Q8N2C3 294 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 PGBD3Q8N328 593 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 SIDT2Q8NBJ9 832 aaKnown RBP7.11□□□□□ -1.27
BEST3-212ENST00000553096 ZNF461Q8TAF7 563 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 RASSF5Q8WWW0 418 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 ERLEC1Q96DZ1 483 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 TRMT2BQ96GJ1 504 aaKnown RBP7.11□□□□□ -1.27
BEST3-212ENST00000553096 AGAP4Q96P64 663 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 SIGLEC11Q96RL6 698 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 CCDC32Q9BV29 185 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 ALOXE3Q9BYJ1 711 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 PITHD1Q9GZP4 211 aaPredicted RBP7.11□□□□□ -1.27
BEST3-212ENST00000553096 WNT5BQ9H1J7 359 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 TP63Q9H3D4 680 aaPredicted RBP7.11□□□□□ -1.27
BEST3-212ENST00000553096 IL1RAPQ9NPH3 570 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 KRT84Q9NSB2 600 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 PLCXD1Q9NUJ7 323 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 MRPL39Q9NYK5 338 aaKnown RBP7.11□□□□□ -1.27
BEST3-212ENST00000553096 SLC25A37Q9NYZ2 338 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 UBA2Q9UBT2 640 aaPredicted RBP7.11□□□□□ -1.27
BEST3-212ENST00000553096 RNF6Q9Y252 685 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 ANGPTL3Q9Y5C1 460 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 GPR39O43194 453 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 SULT1B1O43704 296 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 MITFO75030 526 aaPredicted RBP7.11□□□□□ -1.27
BEST3-212ENST00000553096 KCNK2O95069 426 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 BPNT1O95861 308 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 FABP3P05413 133 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 HEXBP07686 556 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 LPOP22079 712 aaPredicted RBP7.11□□□□□ -1.27
BEST3-212ENST00000553096 ETV6P41212 452 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 PTGER3P43115 390 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 SLC11A2P49281 568 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 DAPP51397 102 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 P2RX3P56373 397 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 IL1RL1Q01638 556 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 TWF1Q12792 350 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 GTF2H3Q13889 308 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 ABRAXAS2Q15018 415 aa7.11□□□□□ -1.27
BEST3-212ENST00000553096 MLIPQ5VWP3 458 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms