RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 POLR3CQ9BUI4 534 aaPredicted RBP3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 OR2B2Q9GZK3 357 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 SHARPINQ9H0F6 387 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 DDX47Q9H0S4 455 aaKnown RBP3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 DPEP3Q9H4B8 488 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 FGF21Q9NSA1 209 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 PTTG2Q9NZH5 202 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 CNOT2Q9NZN8 540 aaKnown RBP3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 PSORS1C1Q9UIG5 152 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 SLC7A7Q9UM01 511 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 EXOC7Q9UPT5 735 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 TMED7Q9Y3B3 224 aa3.7□□□□□ -1.82
LSM6P2-201ENST00000552208 COL3A1P02461 1466 aaPredicted RBP3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 TRBV5-5A0A0J9YX44 114 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 HNRNPCL2B2RXH8 293 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 H3BMM5 538 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 ZNF197O14709 1029 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 AKAP8O43823 692 aaKnown RBP3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 AKR7A3O95154 331 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 PRSS2P07478 247 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 NUDT17P0C025 328 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 FCGR1AP12314 374 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 NR1D1P20393 614 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 MSH3P20585 1137 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 EFNA1P20827 205 aaPredicted RBP3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 CDH3P22223 829 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 ADSSP30520 456 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 AKT2P31751 481 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 CSTF2P33240 577 aaKnown RBP eCLIP3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 SFTPDP35247 375 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 SLC6A12P48065 614 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 TRA2BP62995 288 aaKnown RBP3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 ZXDBP98169 803 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 SLC3A1Q07837 685 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 KIF5AQ12840 1032 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 SF3B4Q15427 424 aaKnown RBP eCLIP3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 FASTKD1Q53R41 847 aaKnown RBP3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 HSP90AA5PQ58FG0 334 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 ARMCX4Q5H9R4 360 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 SLC35D3Q5M8T2 416 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 RAET1GQ6H3X3 334 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 SLC25A24Q6NUK1 477 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 CTR9Q6PD62 1173 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 AMZ2Q86W34 360 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 RCOR2Q8IZ40 523 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 THEM5Q8N1Q8 247 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 KLHDC1Q8N7A1 406 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 RNF148Q8N7C7 305 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 OR4A16Q8NH70 328 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 DQX1Q8TE96 717 aaKnown RBP3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 RFT1Q96AA3 541 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 LGALS12Q96DT0 336 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 DTNBP1Q96EV8 351 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 GUCD1Q96NT3 240 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 CRACR2AQ9BSW2 395 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 URM1Q9BTM9 101 aaKnown RBP3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 TRMT61BQ9BVS5 477 aaKnown RBP3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 TEX13BQ9BXU2 312 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 EGLN1Q9GZT9 426 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 ATG10Q9H0Y0 220 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 SIRPDQ9H106 197 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 DPH5Q9H2P9 285 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 COQ10BQ9H8M1 238 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 LRRC4Q9HBW1 653 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 FAM207AQ9NSI2 230 aaPredicted RBP3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 ANKMY1Q9P2S6 941 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 NCAPD2Q15021 1401 aa3.69□□□□□ -1.82
LSM6P2-201ENST00000552208 A0A0U1RRA0 63 aa3.68□□□□□ -1.82
LSM6P2-201ENST00000552208 A0A1B0GWJ7 208 aa3.68□□□□□ -1.82
LSM6P2-201ENST00000552208 WDR91A4D1P6 747 aa3.68□□□□□ -1.82
LSM6P2-201ENST00000552208 MTMR11A4FU01 709 aa3.68□□□□□ -1.82
LSM6P2-201ENST00000552208 SERINC4A6NH21 518 aa3.68□□□□□ -1.82
LSM6P2-201ENST00000552208 ANGPT2O15123 496 aa3.68□□□□□ -1.82
LSM6P2-201ENST00000552208 TEX28O15482 410 aa3.68□□□□□ -1.82
LSM6P2-201ENST00000552208 LRP3O75074 770 aa3.68□□□□□ -1.82
LSM6P2-201ENST00000552208 CHRNGP07510 517 aa3.68□□□□□ -1.82
LSM6P2-201ENST00000552208 NCF1P14598 390 aaPredicted RBP3.68□□□□□ -1.82
LSM6P2-201ENST00000552208 CPA3P15088 417 aa3.68□□□□□ -1.82
LSM6P2-201ENST00000552208 B4GALT1P15291 398 aa3.68□□□□□ -1.82
LSM6P2-201ENST00000552208 ZNF18P17022 549 aa3.68□□□□□ -1.82
LSM6P2-201ENST00000552208 FCARP24071 287 aa3.68□□□□□ -1.82
LSM6P2-201ENST00000552208 OR1D2P34982 312 aa3.68□□□□□ -1.82
LSM6P2-201ENST00000552208 MAGEA11P43364 429 aa3.68□□□□□ -1.82
LSM6P2-201ENST00000552208 OR3A3P47888 321 aa3.68□□□□□ -1.82
LSM6P2-201ENST00000552208 PITPNBP48739 271 aa3.68□□□□□ -1.82
LSM6P2-201ENST00000552208 FMO5P49326 533 aa3.68□□□□□ -1.82
LSM6P2-201ENST00000552208 PDLIM4P50479 330 aa3.68□□□□□ -1.82
LSM6P2-201ENST00000552208 TNFSF10P50591 281 aa3.68□□□□□ -1.82
LSM6P2-201ENST00000552208 CLDN17P56750 224 aa3.68□□□□□ -1.82
LSM6P2-201ENST00000552208 IRX4P78413 519 aa3.68□□□□□ -1.82
LSM6P2-201ENST00000552208 PDZK1IP1Q13113 114 aa3.68□□□□□ -1.82
LSM6P2-201ENST00000552208 SCGB2A2Q13296 93 aa3.68□□□□□ -1.82
LSM6P2-201ENST00000552208 OPCMLQ14982 345 aa3.68□□□□□ -1.82
LSM6P2-201ENST00000552208 STX1AQ16623 288 aa3.68□□□□□ -1.82
LSM6P2-201ENST00000552208 ZNF542PQ5EBM4 170 aa3.68□□□□□ -1.82
LSM6P2-201ENST00000552208 ZNF425Q6IV72 752 aa3.68□□□□□ -1.82
LSM6P2-201ENST00000552208 IRGCQ6NXR0 463 aa3.68□□□□□ -1.82
LSM6P2-201ENST00000552208 ANO5Q75V66 913 aa3.68□□□□□ -1.82
LSM6P2-201ENST00000552208 COX8CQ7Z4L0 72 aa3.68□□□□□ -1.82
LSM6P2-201ENST00000552208 C5orf24Q7Z6I8 188 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms