RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 ITGAXP20702 1163 aa13.78□□□□□ -0.2
DDX54-203ENST00000546869 F8A1P23610 371 aa13.78□□□□□ -0.2
DDX54-203ENST00000546869 ATP5F1P24539 256 aaPredicted RBP13.78□□□□□ -0.2
DDX54-203ENST00000546869 PTPN4P29074 926 aa13.78□□□□□ -0.2
DDX54-203ENST00000546869 HNF4AP41235 474 aa13.78□□□□□ -0.2
DDX54-203ENST00000546869 NAA20P61599 178 aa13.78□□□□□ -0.2
DDX54-203ENST00000546869 RPS15P62841 145 aaKnown RBP13.78□□□□□ -0.2
DDX54-203ENST00000546869 MEF2AQ02078 507 aaPredicted RBP13.78□□□□□ -0.2
DDX54-203ENST00000546869 IRF8Q02556 426 aa13.78□□□□□ -0.2
DDX54-203ENST00000546869 CHIT1Q13231 466 aa13.78□□□□□ -0.2
DDX54-203ENST00000546869 DNASE1L3Q13609 305 aa13.78□□□□□ -0.2
DDX54-203ENST00000546869 GTF2H2Q13888 395 aa13.78□□□□□ -0.2
DDX54-203ENST00000546869 SLBPQ14493 270 aaKnown RBP eCLIP13.78□□□□□ -0.2
DDX54-203ENST00000546869 HIST2H2ACQ16777 129 aaPredicted RBP13.78□□□□□ -0.2
DDX54-203ENST00000546869 TNFAIP8L3Q5GJ75 292 aa13.78□□□□□ -0.2
DDX54-203ENST00000546869 HIST2H2AA3Q6FI13 130 aa13.78□□□□□ -0.2
DDX54-203ENST00000546869 LCN10Q6JVE6 187 aa13.78□□□□□ -0.2
DDX54-203ENST00000546869 NIPAL1Q6NVV3 410 aa13.78□□□□□ -0.2
DDX54-203ENST00000546869 GTF2H2CQ6P1K8 395 aa13.78□□□□□ -0.2
DDX54-203ENST00000546869 MRPL14Q6P1L8 145 aaKnown RBP13.78□□□□□ -0.2
DDX54-203ENST00000546869 FAM198BQ6UWH4 519 aa13.78□□□□□ -0.2
DDX54-203ENST00000546869 VASH2Q86V25 355 aa13.78□□□□□ -0.2
DDX54-203ENST00000546869 LAS2Q8IYD9 372 aa13.78□□□□□ -0.2
DDX54-203ENST00000546869 TEX9Q8N6V9 391 aa13.78□□□□□ -0.2
DDX54-203ENST00000546869 BANPQ8N9N5 519 aa13.78□□□□□ -0.2
DDX54-203ENST00000546869 ANKRD53Q8N9V6 530 aa13.78□□□□□ -0.2
DDX54-203ENST00000546869 L3MBTL4Q8NA19 623 aa13.78□□□□□ -0.2
DDX54-203ENST00000546869 RDH11Q8TC12 318 aa13.78□□□□□ -0.2
DDX54-203ENST00000546869 CREB3L4Q8TEY5 395 aa13.78□□□□□ -0.2
DDX54-203ENST00000546869 CCDC126Q96EE4 140 aa13.78□□□□□ -0.2
DDX54-203ENST00000546869 PHF21BQ96EK2 531 aa13.78□□□□□ -0.2
DDX54-203ENST00000546869 NTMT1Q9BV86 223 aa13.78□□□□□ -0.2
DDX54-203ENST00000546869 RHBGQ9H310 441 aa13.78□□□□□ -0.2
DDX54-203ENST00000546869 PRORYQ9H606 182 aa13.78□□□□□ -0.2
DDX54-203ENST00000546869 CLK4Q9HAZ1 481 aaKnown RBP13.78□□□□□ -0.2
DDX54-203ENST00000546869 ADGRE2Q9UHX3 823 aa13.78□□□□□ -0.2
DDX54-203ENST00000546869 PCTPQ9UKL6 214 aa13.78□□□□□ -0.2
DDX54-203ENST00000546869 EMCNQ9ULC0 261 aa13.78□□□□□ -0.2
DDX54-203ENST00000546869 ZNF490Q9ULM2 529 aaPredicted RBP13.78□□□□□ -0.2
DDX54-203ENST00000546869 ANGPTL3Q9Y5C1 460 aa13.78□□□□□ -0.2
DDX54-203ENST00000546869 URADA6NGE7 173 aa13.77□□□□□ -0.21
DDX54-203ENST00000546869 FOXO6A8MYZ6 492 aa13.77□□□□□ -0.21
DDX54-203ENST00000546869 C9J4A7 227 aa13.77□□□□□ -0.21
DDX54-203ENST00000546869 G3V2L1 256 aa13.77□□□□□ -0.21
DDX54-203ENST00000546869 H0YIG0 161 aa13.77□□□□□ -0.21
DDX54-203ENST00000546869 PRPF4O43172 522 aaKnown RBP eCLIP13.77□□□□□ -0.21
DDX54-203ENST00000546869 FOXS1O43638 330 aa13.77□□□□□ -0.21
DDX54-203ENST00000546869 DLX3O60479 287 aa13.77□□□□□ -0.21
DDX54-203ENST00000546869 PLIN3O60664 434 aa13.77□□□□□ -0.21
DDX54-203ENST00000546869 CLEC3AO75596 197 aa13.77□□□□□ -0.21
DDX54-203ENST00000546869 SIX3O95343 332 aaPredicted RBP13.77□□□□□ -0.21
DDX54-203ENST00000546869 MED26O95402 600 aa13.77□□□□□ -0.21
DDX54-203ENST00000546869 NSA2O95478 260 aaKnown RBP13.77□□□□□ -0.21
DDX54-203ENST00000546869 RPS17P08708 135 aaKnown RBP13.77□□□□□ -0.21
DDX54-203ENST00000546869 CD22P20273 847 aa13.77□□□□□ -0.21
DDX54-203ENST00000546869 IMPDH1P20839 514 aa13.77□□□□□ -0.21
DDX54-203ENST00000546869 EEF1DP29692 281 aaKnown RBP13.77□□□□□ -0.21
DDX54-203ENST00000546869 SERPINB1P30740 379 aa13.77□□□□□ -0.21
DDX54-203ENST00000546869 PRKAA2P54646 552 aa13.77□□□□□ -0.21
DDX54-203ENST00000546869 HERVK_113P63132 956 aa13.77□□□□□ -0.21
DDX54-203ENST00000546869 RGS1Q08116 209 aa13.77□□□□□ -0.21
DDX54-203ENST00000546869 RBBP5Q15291 538 aaKnown RBP13.77□□□□□ -0.21
DDX54-203ENST00000546869 GRHL2Q6ISB3 625 aa13.77□□□□□ -0.21
DDX54-203ENST00000546869 C16orf46Q6P387 395 aa13.77□□□□□ -0.21
DDX54-203ENST00000546869 OVCH1Q7RTY7 1134 aa13.77□□□□□ -0.21
DDX54-203ENST00000546869 GOLGA7Q7Z5G4 137 aa13.77□□□□□ -0.21
DDX54-203ENST00000546869 AFAP1L2Q8N4X5 818 aa13.77□□□□□ -0.21
DDX54-203ENST00000546869 NACC2Q96BF6 587 aa13.77□□□□□ -0.21
DDX54-203ENST00000546869 PGM2Q96G03 612 aa13.77□□□□□ -0.21
DDX54-203ENST00000546869 MAGEB10Q96LZ2 347 aaPredicted RBP13.77□□□□□ -0.21
DDX54-203ENST00000546869 ZIM3Q96PE6 472 aa13.77□□□□□ -0.21
DDX54-203ENST00000546869 ERVK-6Q9BXR3 956 aa13.77□□□□□ -0.21
DDX54-203ENST00000546869 SLC6A16Q9GZN6 736 aa13.77□□□□□ -0.21
DDX54-203ENST00000546869 DRC3Q9H069 523 aa13.77□□□□□ -0.21
DDX54-203ENST00000546869 IPPKQ9H8X2 491 aa13.77□□□□□ -0.21
DDX54-203ENST00000546869 WDR54Q9H977 334 aa13.77□□□□□ -0.21
DDX54-203ENST00000546869 EPG5Q9HCE0 2579 aa13.77□□□□□ -0.21
DDX54-203ENST00000546869 ZNF304Q9HCX3 659 aa13.77□□□□□ -0.21
DDX54-203ENST00000546869 SLC22A11Q9NSA0 550 aa13.77□□□□□ -0.21
DDX54-203ENST00000546869 PSD3Q9NYI0 1048 aa13.77□□□□□ -0.21
DDX54-203ENST00000546869 IL17BQ9UHF5 180 aa13.77□□□□□ -0.21
DDX54-203ENST00000546869 IGLV3-12A0A075B6K2 115 aa13.76□□□□□ -0.21
DDX54-203ENST00000546869 ZNF891A8MT65 544 aaPredicted RBP13.76□□□□□ -0.21
DDX54-203ENST00000546869 H0YIV9 168 aa13.76□□□□□ -0.21
DDX54-203ENST00000546869 NDUFS4O43181 175 aa13.76□□□□□ -0.21
DDX54-203ENST00000546869 CREG1O75629 220 aa13.76□□□□□ -0.21
DDX54-203ENST00000546869 KLF7O75840 302 aaPredicted RBP13.76□□□□□ -0.21
DDX54-203ENST00000546869 PROCP04070 461 aa13.76□□□□□ -0.21
DDX54-203ENST00000546869 SMIM10L1P0DMW3 83 aa13.76□□□□□ -0.21
DDX54-203ENST00000546869 WT1P19544 449 aaPredicted RBP13.76□□□□□ -0.21
DDX54-203ENST00000546869 HPDP32754 393 aaPredicted RBP13.76□□□□□ -0.21
DDX54-203ENST00000546869 HYAL2Q12891 473 aa13.76□□□□□ -0.21
DDX54-203ENST00000546869 SRSF6Q13247 344 aaKnown RBP13.76□□□□□ -0.21
DDX54-203ENST00000546869 DSG2Q14126 1118 aa13.76□□□□□ -0.21
DDX54-203ENST00000546869 HERC3Q15034 1050 aa13.76□□□□□ -0.21
DDX54-203ENST00000546869 NCF4Q15080 339 aa13.76□□□□□ -0.21
DDX54-203ENST00000546869 ADPRMQ3LIE5 342 aa13.76□□□□□ -0.21
DDX54-203ENST00000546869 KRT71Q3SY84 523 aa13.76□□□□□ -0.21
DDX54-203ENST00000546869 C1orf189Q5VU69 101 aa13.76□□□□□ -0.21
DDX54-203ENST00000546869 SYVN1Q86TM6 617 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms