RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 TTC19Q6DKK2 380 aaPredicted RBP16.67■□□□□ 0.26
CD9-211ENST00000546073 MED27Q6P2C8 311 aa16.67■□□□□ 0.26
CD9-211ENST00000546073 INO80CQ6PI98 192 aaPredicted RBP16.67■□□□□ 0.26
CD9-211ENST00000546073 SLCO4C1Q6ZQN7 724 aa16.67■□□□□ 0.26
CD9-211ENST00000546073 RAB43Q86YS6 212 aa16.67■□□□□ 0.26
CD9-211ENST00000546073 SLC38A9Q8NBW4 561 aa16.67■□□□□ 0.26
CD9-211ENST00000546073 SRFBP1Q8NEF9 429 aaKnown RBP16.67■□□□□ 0.26
CD9-211ENST00000546073 FKBP10Q96AY3 582 aa16.67■□□□□ 0.26
CD9-211ENST00000546073 GBP5Q96PP8 586 aa16.67■□□□□ 0.26
CD9-211ENST00000546073 TMEM109Q9BVC6 243 aa16.67■□□□□ 0.26
CD9-211ENST00000546073 SARGQ9BW04 601 aa16.67■□□□□ 0.26
CD9-211ENST00000546073 IPPKQ9H8X2 491 aa16.67■□□□□ 0.26
CD9-211ENST00000546073 CPNE5Q9HCH3 593 aa16.67■□□□□ 0.26
CD9-211ENST00000546073 ENAMQ9NRM1 1142 aa16.67■□□□□ 0.26
CD9-211ENST00000546073 ZNF282Q9UDV7 671 aaPredicted RBP16.67■□□□□ 0.26
CD9-211ENST00000546073 PCDHGA6Q9Y5G7 932 aa16.67■□□□□ 0.26
CD9-211ENST00000546073 PCDHGA11Q9Y5H2 935 aa16.67■□□□□ 0.26
CD9-211ENST00000546073 KIF26BQ2KJY2 2108 aa16.67■□□□□ 0.26
CD9-211ENST00000546073 A0A1W2PPM1 405 aa16.66■□□□□ 0.26
CD9-211ENST00000546073 TK2O00142 265 aa16.66■□□□□ 0.26
CD9-211ENST00000546073 KLK8O60259 260 aa16.66■□□□□ 0.26
CD9-211ENST00000546073 UGDHO60701 494 aa16.66■□□□□ 0.26
CD9-211ENST00000546073 IGHEP01854 428 aa16.66■□□□□ 0.26
CD9-211ENST00000546073 PCNAP12004 261 aa16.66■□□□□ 0.26
CD9-211ENST00000546073 AGTR2P50052 363 aa16.66■□□□□ 0.26
CD9-211ENST00000546073 DOC2AQ14183 400 aa16.66■□□□□ 0.26
CD9-211ENST00000546073 COL28A1Q2UY09 1125 aa16.66■□□□□ 0.26
CD9-211ENST00000546073 PRTGQ2VWP7 1150 aa16.66■□□□□ 0.26
CD9-211ENST00000546073 CFAP157Q5JU67 520 aa16.66■□□□□ 0.26
CD9-211ENST00000546073 CEP85LQ5SZL2 805 aa16.66■□□□□ 0.26
CD9-211ENST00000546073 SRRM1Q8IYB3 904 aaKnown RBP16.66■□□□□ 0.26
CD9-211ENST00000546073 ENDOVQ8N8Q3 282 aaKnown RBP16.66■□□□□ 0.26
CD9-211ENST00000546073 RDH11Q8TC12 318 aa16.66■□□□□ 0.26
CD9-211ENST00000546073 IP6K3Q96PC2 410 aa16.66■□□□□ 0.26
CD9-211ENST00000546073 ACTL8Q9H568 366 aa16.66■□□□□ 0.26
CD9-211ENST00000546073 GEMIN8Q9NWZ8 242 aaKnown RBP16.66■□□□□ 0.26
CD9-211ENST00000546073 TMEM216Q9P0N5 145 aa16.66■□□□□ 0.26
CD9-211ENST00000546073 G3BP2Q9UN86 482 aaKnown RBP16.66■□□□□ 0.26
CD9-211ENST00000546073 SH2B3Q9UQQ2 575 aa16.66■□□□□ 0.26
CD9-211ENST00000546073 H0YIG0 161 aa16.65■□□□□ 0.26
CD9-211ENST00000546073 PEX12O00623 359 aa16.65■□□□□ 0.26
CD9-211ENST00000546073 LCMT2O60294 686 aaKnown RBP16.65■□□□□ 0.26
CD9-211ENST00000546073 SUPT7LO94864 414 aa16.65■□□□□ 0.26
CD9-211ENST00000546073 CLDN9O95484 217 aa16.65■□□□□ 0.26
CD9-211ENST00000546073 OTCP00480 354 aa16.65■□□□□ 0.26
CD9-211ENST00000546073 SERPINA6P08185 405 aa16.65■□□□□ 0.26
CD9-211ENST00000546073 MTHFD2P13995 350 aa16.65■□□□□ 0.26
CD9-211ENST00000546073 CYP4F2P78329 520 aa16.65■□□□□ 0.26
CD9-211ENST00000546073 RHDQ02161 417 aa16.65■□□□□ 0.26
CD9-211ENST00000546073 ERV3-1Q14264 604 aa16.65■□□□□ 0.26
CD9-211ENST00000546073 ZXDCQ2QGD7 858 aaPredicted RBP16.65■□□□□ 0.26
CD9-211ENST00000546073 CRTC2Q53ET0 693 aaPredicted RBP16.65■□□□□ 0.26
CD9-211ENST00000546073 LRIG3Q6UXM1 1119 aa16.65■□□□□ 0.26
CD9-211ENST00000546073 CHSY3Q70JA7 882 aa16.65■□□□□ 0.26
CD9-211ENST00000546073 OVCH1Q7RTY7 1134 aa16.65■□□□□ 0.26
CD9-211ENST00000546073 GOLGA7Q7Z5G4 137 aa16.65■□□□□ 0.26
CD9-211ENST00000546073 HOMEZQ8IX15 550 aa16.65■□□□□ 0.26
CD9-211ENST00000546073 C4orf33Q8N1A6 199 aa16.65■□□□□ 0.26
CD9-211ENST00000546073 GOLGA6L1Q8N7Z2 621 aa16.65■□□□□ 0.26
CD9-211ENST00000546073 ZCCHC10Q8TBK6 192 aa16.65■□□□□ 0.26
CD9-211ENST00000546073 THAP4Q8WY91 577 aa16.65■□□□□ 0.26
CD9-211ENST00000546073 MIEF2Q96C03 454 aa16.65■□□□□ 0.26
CD9-211ENST00000546073 ROGDIQ9GZN7 287 aa16.65■□□□□ 0.26
CD9-211ENST00000546073 COPS7BQ9H9Q2 264 aaPredicted RBP16.65■□□□□ 0.26
CD9-211ENST00000546073 TRPC4Q9UBN4 977 aa16.65■□□□□ 0.26
CD9-211ENST00000546073 LGALS13Q9UHV8 139 aa16.65■□□□□ 0.26
CD9-211ENST00000546073 PTRH2Q9Y3E5 179 aaKnown RBP16.65■□□□□ 0.26
CD9-211ENST00000546073 SLC22A7Q9Y694 548 aa16.65■□□□□ 0.26
CD9-211ENST00000546073 MAU2Q9Y6X3 613 aa16.65■□□□□ 0.26
CD9-211ENST00000546073 ACACBO00763 2458 aa16.65■□□□□ 0.26
CD9-211ENST00000546073 URB1O60287 2271 aaKnown RBP16.65■□□□□ 0.26
CD9-211ENST00000546073 CDC14CA4D256 554 aa16.64■□□□□ 0.25
CD9-211ENST00000546073 H3BMH7 237 aa16.64■□□□□ 0.25
CD9-211ENST00000546073 PSMD12O00232 456 aaPredicted RBP16.64■□□□□ 0.25
CD9-211ENST00000546073 NRP2O60462 931 aa16.64■□□□□ 0.25
CD9-211ENST00000546073 CLEC3AO75596 197 aa16.64■□□□□ 0.25
CD9-211ENST00000546073 NSA2O95478 260 aaKnown RBP16.64■□□□□ 0.25
CD9-211ENST00000546073 MLYCDO95822 493 aa16.64■□□□□ 0.25
CD9-211ENST00000546073 PRKAR1AP10644 381 aa16.64■□□□□ 0.25
CD9-211ENST00000546073 CASP2P42575 452 aa16.64■□□□□ 0.25
CD9-211ENST00000546073 OR1D4P47884 311 aa16.64■□□□□ 0.25
CD9-211ENST00000546073 HERVK_113P63132 956 aa16.64■□□□□ 0.25
CD9-211ENST00000546073 DSG2Q14126 1118 aa16.64■□□□□ 0.25
CD9-211ENST00000546073 RCN2Q14257 317 aa16.64■□□□□ 0.25
CD9-211ENST00000546073 SLC9A5Q14940 896 aa16.64■□□□□ 0.25
CD9-211ENST00000546073 C10orf62Q5T681 223 aaPredicted RBP16.64■□□□□ 0.25
CD9-211ENST00000546073 MFSD4BQ5TF39 518 aa16.64■□□□□ 0.25
CD9-211ENST00000546073 GRHL2Q6ISB3 625 aa16.64■□□□□ 0.25
CD9-211ENST00000546073 TRIM40Q6P9F5 258 aa16.64■□□□□ 0.25
CD9-211ENST00000546073 MILR1Q7Z6M3 343 aa16.64■□□□□ 0.25
CD9-211ENST00000546073 CYP4X1Q8N118 509 aa16.64■□□□□ 0.25
CD9-211ENST00000546073 METTL27Q8N6F8 245 aaPredicted RBP16.64■□□□□ 0.25
CD9-211ENST00000546073 NT5CQ8TCD5 201 aa16.64■□□□□ 0.25
CD9-211ENST00000546073 TM4SF19Q96DZ7 209 aa16.64■□□□□ 0.25
CD9-211ENST00000546073 PKNOX2Q96KN3 472 aa16.64■□□□□ 0.25
CD9-211ENST00000546073 ERVK-6Q9BXR3 956 aa16.64■□□□□ 0.25
CD9-211ENST00000546073 NOL11Q9H8H0 719 aaKnown RBP16.64■□□□□ 0.25
CD9-211ENST00000546073 WDR54Q9H977 334 aa16.64■□□□□ 0.25
CD9-211ENST00000546073 CLK4Q9HAZ1 481 aaKnown RBP16.64■□□□□ 0.25
CD9-211ENST00000546073 MKKSQ9NPJ1 570 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms