RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 MUTYHQ9UIF7 546 aa10.75□□□□□ -0.69
PBX1-212ENST00000540236 RGPD2P0DJD1 1756 aa10.75□□□□□ -0.69
PBX1-212ENST00000540236 AGPAT2O15120 278 aa10.75□□□□□ -0.69
PBX1-212ENST00000540236 VPS26AO75436 327 aa10.75□□□□□ -0.69
PBX1-212ENST00000540236 TFP02787 698 aa10.75□□□□□ -0.69
PBX1-212ENST00000540236 NUDT7P0C024 238 aa10.75□□□□□ -0.69
PBX1-212ENST00000540236 H2AFB2P0C5Z0 115 aa10.75□□□□□ -0.69
PBX1-212ENST00000540236 ARSBP15848 533 aa10.75□□□□□ -0.69
PBX1-212ENST00000540236 PROZP22891 400 aa10.75□□□□□ -0.69
PBX1-212ENST00000540236 ASPAP45381 313 aa10.75□□□□□ -0.69
PBX1-212ENST00000540236 TAF13Q15543 124 aa10.75□□□□□ -0.69
PBX1-212ENST00000540236 PDZD9Q8IXQ8 264 aa10.75□□□□□ -0.69
PBX1-212ENST00000540236 HS6ST3Q8IZP7 471 aa10.75□□□□□ -0.69
PBX1-212ENST00000540236 ZNF680Q8NEM1 530 aa10.75□□□□□ -0.69
PBX1-212ENST00000540236 OR4Q3Q8NH05 313 aa10.75□□□□□ -0.69
PBX1-212ENST00000540236 THAP6Q8TBB0 222 aa10.75□□□□□ -0.69
PBX1-212ENST00000540236 TNFAIP8L1Q8WVP5 186 aa10.75□□□□□ -0.69
PBX1-212ENST00000540236 GGHQ92820 318 aa10.75□□□□□ -0.69
PBX1-212ENST00000540236 QRFPRQ96P65 431 aa10.75□□□□□ -0.69
PBX1-212ENST00000540236 CD93Q9NPY3 652 aa10.75□□□□□ -0.69
PBX1-212ENST00000540236 SPATA31A5Q5VU36 1347 aa10.75□□□□□ -0.69
PBX1-212ENST00000540236 SPATA31A7Q8IWB4 1347 aa10.75□□□□□ -0.69
PBX1-212ENST00000540236 OR14I1A6ND48 311 aa10.75□□□□□ -0.69
PBX1-212ENST00000540236 SMPD1P17405 629 aa10.75□□□□□ -0.69
PBX1-212ENST00000540236 MAOBP27338 520 aa10.75□□□□□ -0.69
PBX1-212ENST00000540236 HUNKP57058 714 aa10.75□□□□□ -0.69
PBX1-212ENST00000540236 RAB5BP61020 215 aa10.75□□□□□ -0.69
PBX1-212ENST00000540236 ILF3Q12906 894 aaKnown RBP eCLIP10.75□□□□□ -0.69
PBX1-212ENST00000540236 CRHR2Q13324 411 aa10.75□□□□□ -0.69
PBX1-212ENST00000540236 GK2Q14410 553 aaPredicted RBP10.75□□□□□ -0.69
PBX1-212ENST00000540236 TCEAL1Q15170 157 aa10.75□□□□□ -0.69
PBX1-212ENST00000540236 SAMD12Q8N8I0 201 aa10.75□□□□□ -0.69
PBX1-212ENST00000540236 STYXQ8WUJ0 223 aa10.75□□□□□ -0.69
PBX1-212ENST00000540236 RFT1Q96AA3 541 aa10.75□□□□□ -0.69
PBX1-212ENST00000540236 DCLRE1CQ96SD1 692 aaKnown RBP10.75□□□□□ -0.69
PBX1-212ENST00000540236 ATG10Q9H0Y0 220 aa10.75□□□□□ -0.69
PBX1-212ENST00000540236 SLC6A17Q9H1V8 727 aa10.75□□□□□ -0.69
PBX1-212ENST00000540236 NXF3Q9H4D5 531 aaKnown RBP10.75□□□□□ -0.69
PBX1-212ENST00000540236 HOXC10Q9NYD6 342 aa10.75□□□□□ -0.69
PBX1-212ENST00000540236 COMMD9Q9P000 198 aa10.75□□□□□ -0.69
PBX1-212ENST00000540236 FEM1BQ9UK73 627 aa10.75□□□□□ -0.69
PBX1-212ENST00000540236 OR6C75A6NL08 312 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 CD53P19397 219 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 MAGEA12P43365 314 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 SLC11A2P49281 568 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 GALNT2Q10471 571 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 TMEM179BQ7Z7N9 219 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 ADAMTSL2Q86TH1 951 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 TMEM17Q86X19 198 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 ATAD1Q8NBU5 361 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 TEX37Q96LM6 180 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 POFUT2Q9Y2G5 429 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 NFAT5O94916 1531 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 MLNP12872 115 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 JUNBP17275 347 aaPredicted RBP10.74□□□□□ -0.69
PBX1-212ENST00000540236 MATKP42679 507 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 HSPA7P48741 367 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 NDUFV1P49821 464 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 DAPP51397 102 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 STX4Q12846 297 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 PTGR1Q14914 329 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 KLHL22Q53GT1 634 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 SPATA31A1Q5TZJ5 1347 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 C18orf63Q68DL7 685 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 SH2D5Q6ZV89 423 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 MON2Q7Z3U7 1717 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 LGI4Q8N135 537 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 OR8S1Q8NH09 359 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 STAG3L4Q8TBR4 150 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 UFD1Q92890 307 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 ABCG5Q9H222 651 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 SPNS1Q9H2V7 528 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 PCDHGB2Q9Y5G2 931 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 DCCP43146 1447 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 C2orf92A0A1B0GVN3 265 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 C2CD4BA6NLJ0 364 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 FZD9O00144 591 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 MRPS14O60783 128 aaKnown RBP10.74□□□□□ -0.69
PBX1-212ENST00000540236 NDUFS6O75380 124 aaKnown RBP10.74□□□□□ -0.69
PBX1-212ENST00000540236 RNF224P0DH78 156 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 RAB3AP20336 220 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 CDH5P33151 784 aaPredicted RBP10.74□□□□□ -0.69
PBX1-212ENST00000540236 CCR6P51684 374 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 RRAS2P62070 204 aaPredicted RBP10.74□□□□□ -0.69
PBX1-212ENST00000540236 TWF1Q12792 350 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 ZNF789Q5FWF6 425 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 LACC1Q8IV20 430 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 LINC00518Q8N0U6 118 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 AQP11Q8NBQ7 271 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.74□□□□□ -0.69
PBX1-212ENST00000540236 NEDD8-MDP1E9PL57 170 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 SCELO95171 688 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 EPORP19235 508 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 GGT1P19440 569 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 DCTP40126 519 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 NDUFAF6Q330K2 333 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 YIF1BQ5BJH7 314 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 SPANXN4Q5MJ08 99 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 EFCAB12Q6NXP0 572 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 B3GNT7Q8NFL0 401 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms