RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 CCNB1IP1Q9NPC3 277 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 C8orf89P0DMQ9 161 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 LAMP2P13473 410 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 GABRB3P28472 473 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 BMXP51813 675 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 TAS2R50P59544 299 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 IFI44LQ53G44 452 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 SLC22A15Q8IZD6 547 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 OR8H3Q8N146 312 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 SLC15A4Q8N697 577 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 KLHDC9Q8NEP7 349 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 LRCH3Q96II8 777 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 Q96MT0 163 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 SLC35A5Q9BS91 424 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 CD244Q9BZW8 370 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 MUC13Q9H3R2 512 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 C3orf14Q9HBI5 128 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 GMPR2Q9P2T1 348 aaKnown RBP11.86□□□□□ -0.51
BDNF-218ENST00000533246 SSR3Q9UNL2 185 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 SLX4Q8IY92 1834 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 ISPDA4D126 451 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 TSPAN6O43657 245 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 NME6O75414 186 aaPredicted RBP11.86□□□□□ -0.51
BDNF-218ENST00000533246 ITPKBP27987 946 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 EMX2Q04743 252 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 RGS1Q08116 209 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 TARDBPQ13148 414 aaKnown RBP eCLIP11.86□□□□□ -0.51
BDNF-218ENST00000533246 RFTN2Q52LD8 501 aaPredicted RBP11.86□□□□□ -0.51
BDNF-218ENST00000533246 ATAT1Q5SQI0 421 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 PGM2L1Q6PCE3 622 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 UGT2A3Q6UWM9 527 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 TMEM25Q86YD3 366 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 DCP2Q8IU60 420 aaKnown RBP11.86□□□□□ -0.51
BDNF-218ENST00000533246 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.86□□□□□ -0.51
BDNF-218ENST00000533246 NARS2Q96I59 477 aaKnown RBP11.86□□□□□ -0.51
BDNF-218ENST00000533246 IL17FQ96PD4 163 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 SLC29A1Q99808 456 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 DPH2Q9BQC3 489 aaPredicted RBP11.86□□□□□ -0.51
BDNF-218ENST00000533246 ITM2CQ9NQX7 267 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 FNIP2Q9P278 1114 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 MALT1Q9UDY8 824 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 EBF1Q9UH73 591 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 KLF15Q9UIH9 416 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 ABHD14A-ACY1A0A1B0GW23 586 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 CASKO14936 926 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 SCN2BO60939 215 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 PDE9AO76083 593 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 SOX14O95416 240 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 VIPP01282 170 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 SOD2P04179 222 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 APODP05090 189 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 SLC26A3P40879 764 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 ACTR1BP42025 376 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 SMIM11AP58511 58 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 ACTR1AP61163 376 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 RING1Q06587 406 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 KCNAB2Q13303 367 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 TNFAIP8L3Q5GJ75 292 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 IER5LQ5T953 404 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 DENND5AQ6IQ26 1287 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 FAM171BQ6P995 826 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 SHQ1Q6PI26 577 aaKnown RBP11.86□□□□□ -0.51
BDNF-218ENST00000533246 DOK4Q8TEW6 326 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 DNASE1L2Q92874 299 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 FUBP1Q96AE4 644 aaKnown RBP11.86□□□□□ -0.51
BDNF-218ENST00000533246 C3orf30Q96M34 536 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 TEFMQ96QE5 360 aaKnown RBP11.86□□□□□ -0.51
BDNF-218ENST00000533246 NKIRAS2Q9NYR9 191 aa11.86□□□□□ -0.51
BDNF-218ENST00000533246 COL2A1P02458 1487 aaPredicted RBP11.86□□□□□ -0.51
BDNF-218ENST00000533246 ADAMDEC1O15204 470 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 CCL5P13501 91 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 UQCRC1P31930 480 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 OR2T5Q6IEZ7 315 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 COMMD2Q86X83 199 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 LINC00469Q8N7U9 141 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 OR2T29Q8NH02 315 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 OR5K1Q8NHB7 308 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 ISOC1Q96CN7 298 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 DHRS9Q9BPW9 319 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 NEURL2Q9BR09 285 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 OR2B2Q9GZK3 357 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 NDRG2Q9UN36 371 aaKnown RBP11.85□□□□□ -0.51
BDNF-218ENST00000533246 POLR1DQ9Y2S0 133 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 ARID1AO14497 2285 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 PLD2O14939 933 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 BCKDHAP12694 445 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 CD36P16671 472 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 ALAS2P22557 587 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 ARSFP54793 590 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 ERVPABLB-1P60509 514 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 CD300CQ08708 224 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 MINDY4Q4G0A6 757 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 KRT74Q7RTS7 529 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 OR10G2Q8NGC3 310 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 STON2Q8WXE9 905 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 BIRC8Q96P09 236 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 KCNS3Q9BQ31 491 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 OR51V1Q9H2C8 321 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 XKR8Q9H6D3 395 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 RPF2Q9H7B2 306 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms