RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 ABATP80404 500 aa8.69□□□□□ -1.02
NEDD8-206ENST00000531430 PTK6Q13882 451 aa8.69□□□□□ -1.02
NEDD8-206ENST00000531430 ABRAXAS2Q15018 415 aa8.69□□□□□ -1.02
NEDD8-206ENST00000531430 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.69□□□□□ -1.02
NEDD8-206ENST00000531430 PEX26Q7Z412 305 aa8.69□□□□□ -1.02
NEDD8-206ENST00000531430 LRRC6Q86X45 466 aa8.69□□□□□ -1.02
NEDD8-206ENST00000531430 SPNS2Q8IVW8 549 aa8.69□□□□□ -1.02
NEDD8-206ENST00000531430 SIAH3Q8IW03 269 aa8.69□□□□□ -1.02
NEDD8-206ENST00000531430 KIF2BQ8N4N8 673 aa8.69□□□□□ -1.02
NEDD8-206ENST00000531430 RNF214Q8ND24 703 aa8.69□□□□□ -1.02
NEDD8-206ENST00000531430 CHDHQ8NE62 594 aaPredicted RBP8.69□□□□□ -1.02
NEDD8-206ENST00000531430 LILRB4Q8NHJ6 448 aa8.69□□□□□ -1.02
NEDD8-206ENST00000531430 ATG4AQ8WYN0 398 aa8.69□□□□□ -1.02
NEDD8-206ENST00000531430 TSLPQ969D9 159 aa8.69□□□□□ -1.02
NEDD8-206ENST00000531430 CCDC138Q96M89 665 aa8.69□□□□□ -1.02
NEDD8-206ENST00000531430 PWWP2AQ96N64 755 aa8.69□□□□□ -1.02
NEDD8-206ENST00000531430 TMUB1Q9BVT8 246 aa8.69□□□□□ -1.02
NEDD8-206ENST00000531430 GSX1Q9H4S2 264 aaPredicted RBP8.69□□□□□ -1.02
NEDD8-206ENST00000531430 MMP25Q9NPA2 562 aa8.69□□□□□ -1.02
NEDD8-206ENST00000531430 CCM2LQ9NUG4 571 aaPredicted RBP8.69□□□□□ -1.02
NEDD8-206ENST00000531430 DNAJB12Q9NXW2 375 aaKnown RBP8.69□□□□□ -1.02
NEDD8-206ENST00000531430 HEATR5BQ9P2D3 2071 aa8.68□□□□□ -1.02
NEDD8-206ENST00000531430 A0A1B0GTL3 188 aa8.68□□□□□ -1.02
NEDD8-206ENST00000531430 FEZF1A0PJY2 475 aa8.68□□□□□ -1.02
NEDD8-206ENST00000531430 KLRC4-KLRK1H3BQV0 150 aa8.68□□□□□ -1.02
NEDD8-206ENST00000531430 RDH16O75452 317 aa8.68□□□□□ -1.02
NEDD8-206ENST00000531430 VAPBO95292 243 aa8.68□□□□□ -1.02
NEDD8-206ENST00000531430 MATN4O95460 622 aa8.68□□□□□ -1.02
NEDD8-206ENST00000531430 NSA2O95478 260 aaKnown RBP8.68□□□□□ -1.02
NEDD8-206ENST00000531430 SLC16A8O95907 504 aa8.68□□□□□ -1.02
NEDD8-206ENST00000531430 DRD2P14416 443 aa8.68□□□□□ -1.02
NEDD8-206ENST00000531430 HOXB4P17483 251 aaPredicted RBP8.68□□□□□ -1.02
NEDD8-206ENST00000531430 KLK2P20151 261 aa8.68□□□□□ -1.02
NEDD8-206ENST00000531430 TPP2P29144 1249 aaPredicted RBP8.68□□□□□ -1.02
NEDD8-206ENST00000531430 CHRNB4P30926 498 aa8.68□□□□□ -1.02
NEDD8-206ENST00000531430 STIP1P31948 543 aaKnown RBP8.68□□□□□ -1.02
NEDD8-206ENST00000531430 ITGA8P53708 1063 aa8.68□□□□□ -1.02
NEDD8-206ENST00000531430 ACVR1Q04771 509 aa8.68□□□□□ -1.02
NEDD8-206ENST00000531430 HYAL2Q12891 473 aa8.68□□□□□ -1.02
NEDD8-206ENST00000531430 SNTB1Q13884 538 aaKnown RBP8.68□□□□□ -1.02
NEDD8-206ENST00000531430 CEBPEQ15744 281 aa8.68□□□□□ -1.02
NEDD8-206ENST00000531430 CTSL3PQ5NE16 218 aa8.68□□□□□ -1.02
NEDD8-206ENST00000531430 ZNF425Q6IV72 752 aa8.68□□□□□ -1.02
NEDD8-206ENST00000531430 MRNIPQ6NTE8 343 aa8.68□□□□□ -1.02
NEDD8-206ENST00000531430 FGD2Q7Z6J4 655 aa8.68□□□□□ -1.02
NEDD8-206ENST00000531430 SULF2Q8IWU5 870 aa8.68□□□□□ -1.02
NEDD8-206ENST00000531430 CCDC89Q8N998 374 aa8.68□□□□□ -1.02
NEDD8-206ENST00000531430 KCT2Q8NC54 265 aa8.68□□□□□ -1.02
NEDD8-206ENST00000531430 OR5M3Q8NGP4 307 aa8.68□□□□□ -1.02
NEDD8-206ENST00000531430 FAM57AQ8TBR7 257 aa8.68□□□□□ -1.02
NEDD8-206ENST00000531430 ZNF480Q8WV37 535 aa8.68□□□□□ -1.02
NEDD8-206ENST00000531430 C1orf54Q8WWF1 131 aa8.68□□□□□ -1.02
NEDD8-206ENST00000531430 SLC13A3Q8WWT9 602 aa8.68□□□□□ -1.02
NEDD8-206ENST00000531430 PTCHD1Q96NR3 888 aa8.68□□□□□ -1.02
NEDD8-206ENST00000531430 DEFB126Q9BYW3 111 aa8.68□□□□□ -1.02
NEDD8-206ENST00000531430 RHBGQ9H310 441 aa8.68□□□□□ -1.02
NEDD8-206ENST00000531430 NPDC1Q9NQX5 325 aaPredicted RBP8.68□□□□□ -1.02
NEDD8-206ENST00000531430 TMEM184CQ9NVA4 438 aa8.68□□□□□ -1.02
NEDD8-206ENST00000531430 ALKBH4Q9NXW9 302 aa8.68□□□□□ -1.02
NEDD8-206ENST00000531430 TNFRSF10DQ9UBN6 386 aa8.68□□□□□ -1.02
NEDD8-206ENST00000531430 RIMKLBQ9ULI2 386 aa8.68□□□□□ -1.02
NEDD8-206ENST00000531430 NAALAD2Q9Y3Q0 740 aa8.68□□□□□ -1.02
NEDD8-206ENST00000531430 HRH3Q9Y5N1 445 aa8.68□□□□□ -1.02
NEDD8-206ENST00000531430 ABCA4P78363 2273 aa8.68□□□□□ -1.02
NEDD8-206ENST00000531430 AKAP6Q13023 2319 aa8.68□□□□□ -1.02
NEDD8-206ENST00000531430 ANKHD1Q8IWZ3 2542 aaKnown RBP8.68□□□□□ -1.02
NEDD8-206ENST00000531430 CTAGE9A4FU28 777 aa8.67□□□□□ -1.02
NEDD8-206ENST00000531430 E7ENX8 843 aa8.67□□□□□ -1.02
NEDD8-206ENST00000531430 NPIPA2E9PIF3 369 aa8.67□□□□□ -1.02
NEDD8-206ENST00000531430 NPIPA3F8WFD2 350 aa8.67□□□□□ -1.02
NEDD8-206ENST00000531430 MYO1CO00159 1063 aa8.67□□□□□ -1.02
NEDD8-206ENST00000531430 SLC16A5O15375 505 aa8.67□□□□□ -1.02
NEDD8-206ENST00000531430 ZBTB14O43829 449 aa8.67□□□□□ -1.02
NEDD8-206ENST00000531430 PEX1O43933 1283 aa8.67□□□□□ -1.02
NEDD8-206ENST00000531430 NME2P1O60361 137 aa8.67□□□□□ -1.02
NEDD8-206ENST00000531430 PSIP1O75475 530 aaKnown RBP8.67□□□□□ -1.02
NEDD8-206ENST00000531430 TOXO94900 526 aa8.67□□□□□ -1.02
NEDD8-206ENST00000531430 ZSCAN5DPP0CG00 497 aa8.67□□□□□ -1.02
NEDD8-206ENST00000531430 ACANP16112 2415 aa8.67□□□□□ -1.02
NEDD8-206ENST00000531430 NME2P22392 152 aa8.67□□□□□ -1.02
NEDD8-206ENST00000531430 RPS3P23396 243 aaKnown RBP eCLIP8.67□□□□□ -1.022e-15■■■□□ 16.4
NEDD8-206ENST00000531430 SLC26A5P58743 744 aa8.67□□□□□ -1.02
NEDD8-206ENST00000531430 GPR85P60893 370 aa8.67□□□□□ -1.02
NEDD8-206ENST00000531430 OLR1P78380 273 aa8.67□□□□□ -1.02
NEDD8-206ENST00000531430 PLGLB1Q02325 96 aa8.67□□□□□ -1.02
NEDD8-206ENST00000531430 TAP2Q03519 686 aa8.67□□□□□ -1.02
NEDD8-206ENST00000531430 CUL1Q13616 776 aa8.67□□□□□ -1.02
NEDD8-206ENST00000531430 KCNJ11Q14654 390 aa8.67□□□□□ -1.02
NEDD8-206ENST00000531430 USP10Q14694 798 aaKnown RBP8.67□□□□□ -1.02
NEDD8-206ENST00000531430 ARHGAP19Q14CB8 494 aa8.67□□□□□ -1.02
NEDD8-206ENST00000531430 TYSND1Q2T9J0 566 aa8.67□□□□□ -1.02
NEDD8-206ENST00000531430 ZNF585AQ6P3V2 769 aa8.67□□□□□ -1.02
NEDD8-206ENST00000531430 Q71RC1 249 aaPredicted RBP8.67□□□□□ -1.02
NEDD8-206ENST00000531430 KIAA1328Q86T90 577 aa8.67□□□□□ -1.02
NEDD8-206ENST00000531430 SLC26A11Q86WA9 606 aa8.67□□□□□ -1.02
NEDD8-206ENST00000531430 TGIF2LYQ8IUE0 185 aa8.67□□□□□ -1.02
NEDD8-206ENST00000531430 CHERPQ8IWX8 916 aaKnown RBP8.67□□□□□ -1.02
NEDD8-206ENST00000531430 REXO1L1PQ8IX06 675 aa8.67□□□□□ -1.02
NEDD8-206ENST00000531430 DMRTC2Q8IXT2 367 aaPredicted RBP8.67□□□□□ -1.02
NEDD8-206ENST00000531430 CCDC170Q8IYT3 715 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms