RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 CPSF6Q16630 551 aaKnown RBP eCLIP7.59□□□□□ -1.19
SSBP3-211ENST00000528787 SMU1Q2TAY7 513 aa7.59□□□□□ -1.19
SSBP3-211ENST00000528787 SPIN4Q56A73 249 aa7.59□□□□□ -1.19
SSBP3-211ENST00000528787 ERMP1Q7Z2K6 904 aa7.59□□□□□ -1.19
SSBP3-211ENST00000528787 SLCO6A1Q86UG4 719 aa7.59□□□□□ -1.19
SSBP3-211ENST00000528787 CUZD1Q86UP6 607 aa7.59□□□□□ -1.19
SSBP3-211ENST00000528787 TMEM126BQ8IUX1 230 aa7.59□□□□□ -1.19
SSBP3-211ENST00000528787 DNAJC22Q8N4W6 341 aa7.59□□□□□ -1.19
SSBP3-211ENST00000528787 CSNK1A1LQ8N752 337 aa7.59□□□□□ -1.19
SSBP3-211ENST00000528787 OR4F6Q8NGB9 312 aa7.59□□□□□ -1.19
SSBP3-211ENST00000528787 FLVCR1-AS1Q8TAF5 88 aa7.59□□□□□ -1.19
SSBP3-211ENST00000528787 PIWIL2Q8TC59 973 aaKnown RBP7.59□□□□□ -1.19
SSBP3-211ENST00000528787 NT5CQ8TCD5 201 aa7.59□□□□□ -1.19
SSBP3-211ENST00000528787 AGAP11Q8TF27 550 aa7.59□□□□□ -1.19
SSBP3-211ENST00000528787 CKAP2Q8WWK9 683 aa7.59□□□□□ -1.19
SSBP3-211ENST00000528787 SELENOMQ8WWX9 145 aa7.59□□□□□ -1.19
SSBP3-211ENST00000528787 JPH3Q8WXH2 748 aaPredicted RBP7.59□□□□□ -1.19
SSBP3-211ENST00000528787 RGMAQ96B86 450 aa7.59□□□□□ -1.19
SSBP3-211ENST00000528787 KCNC2Q96PR1 638 aa7.59□□□□□ -1.19
SSBP3-211ENST00000528787 OR6C1Q96RD1 312 aa7.59□□□□□ -1.19
SSBP3-211ENST00000528787 GATA5Q9BWX5 397 aaPredicted RBP7.59□□□□□ -1.19
SSBP3-211ENST00000528787 GSTO2Q9H4Y5 243 aa7.59□□□□□ -1.19
SSBP3-211ENST00000528787 COPS7BQ9H9Q2 264 aaPredicted RBP7.59□□□□□ -1.19
SSBP3-211ENST00000528787 ANKHQ9HCJ1 492 aa7.59□□□□□ -1.19
SSBP3-211ENST00000528787 SLC6A20Q9NP91 592 aa7.59□□□□□ -1.19
SSBP3-211ENST00000528787 MS4A12Q9NXJ0 267 aa7.59□□□□□ -1.19
SSBP3-211ENST00000528787 CIDEBQ9UHD4 219 aa7.59□□□□□ -1.19
SSBP3-211ENST00000528787 RAPGEFL1Q9UHV5 662 aa7.59□□□□□ -1.19
SSBP3-211ENST00000528787 PILRAQ9UKJ1 303 aa7.59□□□□□ -1.19
SSBP3-211ENST00000528787 MRPS33Q9Y291 106 aaKnown RBP7.59□□□□□ -1.19
SSBP3-211ENST00000528787 PADI2Q9Y2J8 665 aa7.59□□□□□ -1.19
SSBP3-211ENST00000528787 TMED5Q9Y3A6 229 aa7.59□□□□□ -1.19
SSBP3-211ENST00000528787 NEUROG3Q9Y4Z2 214 aa7.59□□□□□ -1.19
SSBP3-211ENST00000528787 PCDHGA7Q9Y5G6 932 aa7.59□□□□□ -1.19
SSBP3-211ENST00000528787 SLC22A7Q9Y694 548 aa7.59□□□□□ -1.19
SSBP3-211ENST00000528787 CNOT1A5YKK6 2376 aaKnown RBP7.59□□□□□ -1.2
SSBP3-211ENST00000528787 USP34Q70CQ2 3546 aa7.58□□□□□ -1.2
SSBP3-211ENST00000528787 A0A0J9YVX5 310 aa7.58□□□□□ -1.2
SSBP3-211ENST00000528787 FITM1A5D6W6 292 aa7.58□□□□□ -1.2
SSBP3-211ENST00000528787 SRRM3A6NNA2 597 aaPredicted RBP7.58□□□□□ -1.2
SSBP3-211ENST00000528787 C9J4A7 227 aa7.58□□□□□ -1.2
SSBP3-211ENST00000528787 H0YIG0 161 aa7.58□□□□□ -1.2
SSBP3-211ENST00000528787 OR7A17O14581 309 aa7.58□□□□□ -1.2
SSBP3-211ENST00000528787 NVLO15381 856 aaKnown RBP7.58□□□□□ -1.2
SSBP3-211ENST00000528787 SCRG1O75711 98 aa7.58□□□□□ -1.2
SSBP3-211ENST00000528787 RSL1D1O76021 490 aaKnown RBP7.58□□□□□ -1.2
SSBP3-211ENST00000528787 DXOO77932 396 aaKnown RBP7.58□□□□□ -1.2
SSBP3-211ENST00000528787 CAPN1P07384 714 aa7.58□□□□□ -1.2
SSBP3-211ENST00000528787 ACPPP15309 386 aa7.58□□□□□ -1.2
SSBP3-211ENST00000528787 CREB1P16220 341 aa7.58□□□□□ -1.2
SSBP3-211ENST00000528787 BGNP21810 368 aa7.58□□□□□ -1.2
SSBP3-211ENST00000528787 PSMB5P28074 263 aa7.58□□□□□ -1.2
SSBP3-211ENST00000528787 HOXD11P31277 338 aaPredicted RBP7.58□□□□□ -1.2
SSBP3-211ENST00000528787 TLX1P31314 330 aaPredicted RBP7.58□□□□□ -1.2
SSBP3-211ENST00000528787 RPL3P39023 403 aaKnown RBP7.58□□□□□ -1.2
SSBP3-211ENST00000528787 MDH1P40925 334 aaKnown RBP7.58□□□□□ -1.2
SSBP3-211ENST00000528787 ATP1A2P50993 1020 aa7.58□□□□□ -1.2
SSBP3-211ENST00000528787 CDH13P55290 713 aa7.58□□□□□ -1.2
SSBP3-211ENST00000528787 WDR4P57081 412 aaKnown RBP7.58□□□□□ -1.2
SSBP3-211ENST00000528787 ABHD18Q0P651 414 aa7.58□□□□□ -1.2
SSBP3-211ENST00000528787 TRAF3Q13114 568 aa7.58□□□□□ -1.2
SSBP3-211ENST00000528787 TARDBPQ13148 414 aaKnown RBP eCLIP7.58□□□□□ -1.2
SSBP3-211ENST00000528787 BIKQ13323 160 aa7.58□□□□□ -1.2
SSBP3-211ENST00000528787 ZRSR2Q15696 482 aaKnown RBP7.58□□□□□ -1.2
SSBP3-211ENST00000528787 AP5B1Q2VPB7 878 aa7.58□□□□□ -1.2
SSBP3-211ENST00000528787 ARL13AQ5H913 290 aaPredicted RBP7.58□□□□□ -1.2
SSBP3-211ENST00000528787 SH2D4BQ5SQS7 431 aa7.58□□□□□ -1.2
SSBP3-211ENST00000528787 CATSPEREQ5SY80 951 aa7.58□□□□□ -1.2
SSBP3-211ENST00000528787 FCRL6Q6DN72 434 aa7.58□□□□□ -1.2
SSBP3-211ENST00000528787 ZNF574Q6ZN55 896 aaPredicted RBP7.58□□□□□ -1.2
SSBP3-211ENST00000528787 ESX1Q8N693 406 aa7.58□□□□□ -1.2
SSBP3-211ENST00000528787 OR7G3Q8NG95 312 aa7.58□□□□□ -1.2
SSBP3-211ENST00000528787 STON2Q8WXE9 905 aa7.58□□□□□ -1.2
SSBP3-211ENST00000528787 STARD8Q92502 1023 aa7.58□□□□□ -1.2
SSBP3-211ENST00000528787 ZNF75CPQ92670 426 aaPredicted RBP7.58□□□□□ -1.2
SSBP3-211ENST00000528787 GAL3ST3Q96A11 431 aa7.58□□□□□ -1.2
SSBP3-211ENST00000528787 CLIP3Q96DZ5 547 aa7.58□□□□□ -1.2
SSBP3-211ENST00000528787 PPP3R2Q96LZ3 170 aa7.58□□□□□ -1.2
SSBP3-211ENST00000528787 ZNF578Q96N58 590 aaPredicted RBP7.58□□□□□ -1.2
SSBP3-211ENST00000528787 ZNF285Q96NJ3 590 aa7.58□□□□□ -1.2
SSBP3-211ENST00000528787 OR2A5Q96R48 311 aa7.58□□□□□ -1.2
SSBP3-211ENST00000528787 TBCDQ9BTW9 1192 aa7.58□□□□□ -1.2
SSBP3-211ENST00000528787 NPLQ9BXD5 320 aaPredicted RBP7.58□□□□□ -1.2
SSBP3-211ENST00000528787 REXO4Q9GZR2 422 aaKnown RBP7.58□□□□□ -1.2
SSBP3-211ENST00000528787 CCDC134Q9H6E4 229 aa7.58□□□□□ -1.2
SSBP3-211ENST00000528787 WDR41Q9HAD4 459 aa7.58□□□□□ -1.2
SSBP3-211ENST00000528787 PRDM9Q9NQV7 894 aa7.58□□□□□ -1.2
SSBP3-211ENST00000528787 VPS29Q9UBQ0 182 aa7.58□□□□□ -1.2
SSBP3-211ENST00000528787 HAO1Q9UJM8 370 aa7.58□□□□□ -1.2
SSBP3-211ENST00000528787 ADAM29Q9UKF5 820 aa7.58□□□□□ -1.2
SSBP3-211ENST00000528787 NXT1Q9UKK6 140 aaKnown RBP7.58□□□□□ -1.2
SSBP3-211ENST00000528787 ZNF490Q9ULM2 529 aaPredicted RBP7.58□□□□□ -1.2
SSBP3-211ENST00000528787 TRAF6Q9Y4K3 522 aa7.58□□□□□ -1.2
SSBP3-211ENST00000528787 PTPRBP23467 1997 aa7.58□□□□□ -1.2
SSBP3-211ENST00000528787 CEP250Q9BV73 2442 aa7.58□□□□□ -1.2
SSBP3-211ENST00000528787 A0A1B0GX78 115 aa7.57□□□□□ -1.2
SSBP3-211ENST00000528787 HYKKA2RU49 373 aa7.57□□□□□ -1.2
SSBP3-211ENST00000528787 DCDC2BA2VCK2 349 aa7.57□□□□□ -1.2
SSBP3-211ENST00000528787 FOXO6A8MYZ6 492 aa7.57□□□□□ -1.2
SSBP3-211ENST00000528787 H0YGG7 62 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms