RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 SPINK2P20155 84 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 HMOX2P30519 316 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 MLLT3P42568 568 aaPredicted RBP11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 ARL4DP49703 201 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 INHBCP55103 352 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 RPS15AP62244 130 aaKnown RBP11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 TRA2AQ13595 282 aaKnown RBP eCLIP11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 C16orf72Q14CZ0 275 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 FRG2Q64ET8 278 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 SCIMPQ6UWF3 145 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 VN1R4Q7Z5H5 301 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 MARCH9Q86YJ5 346 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 CRLF3Q8IUI8 442 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 MCATQ8IVS2 390 aaKnown RBP11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 ANKS4BQ8N8V4 417 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 MFSD9Q8NBP5 474 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 UBE2E3Q969T4 207 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 TMEM74Q96NL1 305 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 FRG2BQ96QU4 278 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 HBEGFQ99075 208 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 RHBGQ9H310 441 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 TUBB1Q9H4B7 451 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 SNX6Q9UNH7 406 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 APOBEC2Q9Y235 224 aaKnown RBP11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 ZZEF1O43149 2961 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 ADAMTS20P59510 1910 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 H0YGG7 62 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 SNX3O60493 162 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 TBX6O95947 436 aaPredicted RBP11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 MT-CO3P00414 261 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 PDYNP01213 254 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 KRT6AP02538 564 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 KRT6BP04259 564 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 JUNP05412 331 aaKnown RBP11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 CDK4P11802 303 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 CCKBRP32239 447 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 KRT6CP48668 564 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 ARF3P61204 181 aaPredicted RBP11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 CYP4F2P78329 520 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 DDX39BQ13838 428 aaKnown RBP11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 ABRAXAS2Q15018 415 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 GPR19Q15760 415 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 ISXQ2M1V0 245 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 HES3Q5TGS1 186 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 ERMP1Q7Z2K6 904 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 TBC1D19Q8N5T2 526 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 CCDC197Q8NCU1 140 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 HUS1BQ8NHY5 278 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 PIWIL2Q8TC59 973 aaKnown RBP11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 CREB3L4Q8TEY5 395 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 USP7Q93009 1102 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 MTERF1Q99551 399 aaKnown RBP11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 MACROD1Q9BQ69 325 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 ELOVL6Q9H5J4 265 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 FGFR1OP2Q9NVK5 253 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 ZFP69BQ9UJL9 534 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 TSC22D4Q9Y3Q8 395 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 PTGDR2Q9Y5Y4 395 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 AP1M2Q9Y6Q5 423 aa11.62□□□□□ -0.55
TRAF3IP2-211ENST00000528599 ANKDD1BA6NHY2 528 aa11.61□□□□□ -0.55
TRAF3IP2-211ENST00000528599 HGSO14964 777 aaPredicted RBP11.61□□□□□ -0.55
TRAF3IP2-211ENST00000528599 P2RX6O15547 441 aa11.61□□□□□ -0.55
TRAF3IP2-211ENST00000528599 MAP3K7O43318 606 aa11.61□□□□□ -0.55
TRAF3IP2-211ENST00000528599 HYAL3O43820 417 aaPredicted RBP11.61□□□□□ -0.55
TRAF3IP2-211ENST00000528599 ULK1O75385 1050 aa11.61□□□□□ -0.55
TRAF3IP2-211ENST00000528599 CSO75390 466 aaKnown RBP11.61□□□□□ -0.55
TRAF3IP2-211ENST00000528599 AHRP35869 848 aa11.61□□□□□ -0.55
TRAF3IP2-211ENST00000528599 VSX2P58304 361 aaPredicted RBP11.61□□□□□ -0.55
TRAF3IP2-211ENST00000528599 IFT88Q13099 833 aa11.61□□□□□ -0.55
TRAF3IP2-211ENST00000528599 ZC3H12BQ5HYM0 836 aaKnown RBP11.61□□□□□ -0.55
TRAF3IP2-211ENST00000528599 WDR75Q8IWA0 830 aaKnown RBP11.61□□□□□ -0.55
TRAF3IP2-211ENST00000528599 CHCHD4Q8N4Q1 142 aa11.61□□□□□ -0.55
TRAF3IP2-211ENST00000528599 TWIST2Q8WVJ9 160 aa11.61□□□□□ -0.55
TRAF3IP2-211ENST00000528599 SELENOMQ8WWX9 145 aa11.61□□□□□ -0.55
TRAF3IP2-211ENST00000528599 REPS1Q96D71 796 aa11.61□□□□□ -0.55
TRAF3IP2-211ENST00000528599 TM4SF19Q96DZ7 209 aa11.61□□□□□ -0.55
TRAF3IP2-211ENST00000528599 THAP11Q96EK4 314 aa11.61□□□□□ -0.55
TRAF3IP2-211ENST00000528599 OCIAD1Q9NX40 245 aa11.61□□□□□ -0.55
TRAF3IP2-211ENST00000528599 SIDT1Q9NXL6 827 aaKnown RBP11.61□□□□□ -0.55
TRAF3IP2-211ENST00000528599 PLCL2Q9UPR0 1127 aa11.61□□□□□ -0.55
TRAF3IP2-211ENST00000528599 MDC1Q14676 2089 aaKnown RBP11.6□□□□□ -0.55
TRAF3IP2-211ENST00000528599 MAGEB17A8MXT2 336 aa11.6□□□□□ -0.55
TRAF3IP2-211ENST00000528599 ZNF195O14628 629 aa11.6□□□□□ -0.55
TRAF3IP2-211ENST00000528599 PIP5K1BO14986 540 aa11.6□□□□□ -0.55
TRAF3IP2-211ENST00000528599 SKAP2O75563 359 aaPredicted RBP11.6□□□□□ -0.55
TRAF3IP2-211ENST00000528599 KIAA0754O94854 1291 aa11.6□□□□□ -0.55
TRAF3IP2-211ENST00000528599 ETHE1O95571 254 aa11.6□□□□□ -0.55
TRAF3IP2-211ENST00000528599 SERPIND1P05546 499 aa11.6□□□□□ -0.55
TRAF3IP2-211ENST00000528599 LINC00032P0C843 101 aa11.6□□□□□ -0.55
TRAF3IP2-211ENST00000528599 MSL3P1P0C860 447 aa11.6□□□□□ -0.55
TRAF3IP2-211ENST00000528599 PIK3CBP42338 1070 aa11.6□□□□□ -0.55
TRAF3IP2-211ENST00000528599 RPS13P62277 151 aaKnown RBP11.6□□□□□ -0.55
TRAF3IP2-211ENST00000528599 BTKQ06187 659 aa11.6□□□□□ -0.55
TRAF3IP2-211ENST00000528599 HYAL2Q12891 473 aa11.6□□□□□ -0.55
TRAF3IP2-211ENST00000528599 FOXC1Q12948 553 aa11.6□□□□□ -0.55
TRAF3IP2-211ENST00000528599 PDCD2Q16342 344 aaPredicted RBP11.6□□□□□ -0.55
TRAF3IP2-211ENST00000528599 TMTC4Q5T4D3 741 aa11.6□□□□□ -0.55
TRAF3IP2-211ENST00000528599 CGB2Q6NT52 195 aa11.6□□□□□ -0.55
TRAF3IP2-211ENST00000528599 MAVSQ7Z434 540 aa11.6□□□□□ -0.55
TRAF3IP2-211ENST00000528599 ASPGQ86U10 573 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms