RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 DSELQ8IZU8 1212 aa10.43□□□□□ -0.74
NEDD8-204ENST00000526430 MYO1HQ8N1T3 1032 aa10.43□□□□□ -0.74
NEDD8-204ENST00000526430 C2orf73Q8N5S3 287 aaPredicted RBP10.43□□□□□ -0.74
NEDD8-204ENST00000526430 OR2A1Q8NGT9 310 aa10.43□□□□□ -0.74
NEDD8-204ENST00000526430 OR2L8Q8NGY9 312 aa10.43□□□□□ -0.74
NEDD8-204ENST00000526430 LCN9Q8WX39 176 aa10.43□□□□□ -0.74
NEDD8-204ENST00000526430 OR2A14Q96R47 310 aa10.43□□□□□ -0.74
NEDD8-204ENST00000526430 CCDC77Q9BR77 488 aa10.43□□□□□ -0.74
NEDD8-204ENST00000526430 REPIN1Q9BWE0 567 aaKnown RBP10.43□□□□□ -0.74
NEDD8-204ENST00000526430 PPCSQ9HAB8 311 aa10.43□□□□□ -0.74
NEDD8-204ENST00000526430 TMEM216Q9P0N5 145 aa10.43□□□□□ -0.74
NEDD8-204ENST00000526430 EMCNQ9ULC0 261 aa10.43□□□□□ -0.74
NEDD8-204ENST00000526430 STAB1Q9NY15 2570 aa10.43□□□□□ -0.74
NEDD8-204ENST00000526430 INTS1Q8N201 2190 aaKnown RBP10.42□□□□□ -0.74
NEDD8-204ENST00000526430 A0A087X1B8 175 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 IGHV5-51A0A0C4DH38 117 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 IQANK1A0A1B0GTG1 560 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 TLDC2A0PJX2 215 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 SMIM23A6NLE4 172 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 GOLGA8RI6L899 631 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 MEN1O00255 615 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 KLK8O60259 260 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 CDH16O75309 829 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 JRKO75564 520 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 CAPN1P07384 714 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 CHRM5P08912 532 aaPredicted RBP10.42□□□□□ -0.74
NEDD8-204ENST00000526430 LTA4HP09960 611 aaKnown RBP10.42□□□□□ -0.74
NEDD8-204ENST00000526430 PYGBP11216 843 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 POLR2CP19387 275 aaPredicted RBP10.42□□□□□ -0.74
NEDD8-204ENST00000526430 PRDX3P30048 256 aaKnown RBP10.42□□□□□ -0.74
NEDD8-204ENST00000526430 RAB28P51157 221 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 KPNA2P52292 529 aaKnown RBP10.42□□□□□ -0.74
NEDD8-204ENST00000526430 SLC12A2P55011 1212 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 ATP6V0D1P61421 351 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 CDKL1Q00532 357 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 TLE4Q04727 773 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 SP140Q13342 867 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 CASP8Q14790 479 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 LRRC8EQ6NSJ5 796 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 FAM198BQ6UWH4 519 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 FAM92BQ6ZTR7 304 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 MRGPREQ86SM8 312 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 TRABD2AQ86V40 505 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 TGIF2LYQ8IUE0 185 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 TMEM126BQ8IUX1 230 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 SLC38A9Q8NBW4 561 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 ACBD4Q8NC06 268 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 PPFIBP2Q8ND30 876 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 CHTF18Q8WVB6 975 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 SKA2Q8WVK7 121 aaPredicted RBP10.42□□□□□ -0.74
NEDD8-204ENST00000526430 RHBDF1Q96CC6 855 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 MTBPQ96DY7 904 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 OR4K3Q96R72 315 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 SPOCK3Q9BQ16 436 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 VPS11Q9H270 941 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 C12orf65Q9H3J6 166 aaKnown RBP10.42□□□□□ -0.74
NEDD8-204ENST00000526430 SRMSQ9H3Y6 488 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 SYNPO2LQ9H987 977 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 ZBTB20Q9HC78 741 aaPredicted RBP10.42□□□□□ -0.74
NEDD8-204ENST00000526430 INTS7Q9NVH2 962 aaKnown RBP10.42□□□□□ -0.74
NEDD8-204ENST00000526430 HRASLS2Q9NWW9 162 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 OR6C2Q9NZP2 312 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 STOX2Q9P2F5 926 aaPredicted RBP10.42□□□□□ -0.74
NEDD8-204ENST00000526430 SH2B3Q9UQQ2 575 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 OARD1Q9Y530 152 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 ASB1Q9Y576 335 aa10.42□□□□□ -0.74
NEDD8-204ENST00000526430 AKAP6Q13023 2319 aa10.41□□□□□ -0.74
NEDD8-204ENST00000526430 MAP2K7O14733 419 aa10.41□□□□□ -0.74
NEDD8-204ENST00000526430 PCDH17O14917 1159 aa10.41□□□□□ -0.74
NEDD8-204ENST00000526430 HCRTR1O43613 425 aa10.41□□□□□ -0.74
NEDD8-204ENST00000526430 PRAMEF4O60810 478 aa10.41□□□□□ -0.74
NEDD8-204ENST00000526430 SASH3O75995 380 aa10.41□□□□□ -0.74
NEDD8-204ENST00000526430 CATP04040 527 aaKnown RBP10.41□□□□□ -0.74
NEDD8-204ENST00000526430 EBLN1P0CF75 366 aa10.41□□□□□ -0.74
NEDD8-204ENST00000526430 COL6A2P12110 1019 aa10.41□□□□□ -0.74
NEDD8-204ENST00000526430 UGT2B7P16662 529 aa10.41□□□□□ -0.74
NEDD8-204ENST00000526430 TFEBP19484 476 aa10.41□□□□□ -0.74
NEDD8-204ENST00000526430 PSMB5P28074 263 aa10.41□□□□□ -0.74
NEDD8-204ENST00000526430 SHMT2P34897 504 aa10.41□□□□□ -0.74
NEDD8-204ENST00000526430 RORAP35398 523 aa10.41□□□□□ -0.74
NEDD8-204ENST00000526430 GABRA4P48169 554 aa10.41□□□□□ -0.74
NEDD8-204ENST00000526430 KRT33BQ14525 404 aa10.41□□□□□ -0.74
NEDD8-204ENST00000526430 KCNAB1Q14722 419 aa10.41□□□□□ -0.74
NEDD8-204ENST00000526430 ARHGAP19Q14CB8 494 aa10.41□□□□□ -0.74
NEDD8-204ENST00000526430 ACAP2Q15057 778 aa10.41□□□□□ -0.74
NEDD8-204ENST00000526430 TGFBIQ15582 683 aa10.41□□□□□ -0.74
NEDD8-204ENST00000526430 ZIC1Q15915 447 aa10.41□□□□□ -0.74
NEDD8-204ENST00000526430 TECRLQ5HYJ1 363 aa10.41□□□□□ -0.74
NEDD8-204ENST00000526430 LGSNQ5TDP6 509 aa10.41□□□□□ -0.74
NEDD8-204ENST00000526430 FAM69BQ5VUD6 431 aa10.41□□□□□ -0.74
NEDD8-204ENST00000526430 PRAMEF9Q5VWM5 478 aa10.41□□□□□ -0.74
NEDD8-204ENST00000526430 ZNF324BQ6AW86 544 aaPredicted RBP10.41□□□□□ -0.74
NEDD8-204ENST00000526430 LCN10Q6JVE6 187 aa10.41□□□□□ -0.74
NEDD8-204ENST00000526430 IRGCQ6NXR0 463 aa10.41□□□□□ -0.74
NEDD8-204ENST00000526430 FAM180AQ6UWF9 173 aa10.41□□□□□ -0.74
NEDD8-204ENST00000526430 SUSD1Q6UWL2 747 aa10.41□□□□□ -0.74
NEDD8-204ENST00000526430 IGFL2Q6UWQ7 119 aa10.41□□□□□ -0.74
NEDD8-204ENST00000526430 LRIG3Q6UXM1 1119 aa10.41□□□□□ -0.74
NEDD8-204ENST00000526430 RAPH1Q70E73 1250 aa10.41□□□□□ -0.74
NEDD8-204ENST00000526430 CCDC91Q7Z6B0 441 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms