RNA–Protein interactions for RNA: ENST00000526308.2

PCDHB18P-202, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 3,197 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-202ENST00000526308 DUSP26Q9BV47 211 aa13.28□□□□□ -0.28
PCDHB18P-202ENST00000526308 GPR62Q9BZJ7 368 aa13.28□□□□□ -0.28
PCDHB18P-202ENST00000526308 KCTD5Q9NXV2 234 aa13.28□□□□□ -0.28
PCDHB18P-202ENST00000526308 CRNNQ9UBG3 495 aaPredicted RBP13.28□□□□□ -0.28
PCDHB18P-202ENST00000526308 KLHL20Q9Y2M5 609 aa13.28□□□□□ -0.28
PCDHB18P-202ENST00000526308 CDH23Q9H251 3354 aa13.28□□□□□ -0.28
PCDHB18P-202ENST00000526308 COL4A4P53420 1690 aaPredicted RBP13.27□□□□□ -0.28
PCDHB18P-202ENST00000526308 SLC38A8A6NNN8 435 aa13.27□□□□□ -0.28
PCDHB18P-202ENST00000526308 TBL1XO60907 577 aa13.27□□□□□ -0.28
PCDHB18P-202ENST00000526308 AOC2O75106 756 aa13.27□□□□□ -0.28
PCDHB18P-202ENST00000526308 RPS3P23396 243 aaKnown RBP eCLIP13.27□□□□□ -0.28
PCDHB18P-202ENST00000526308 BCL2L1Q07817 233 aa13.27□□□□□ -0.28
PCDHB18P-202ENST00000526308 FAM217AQ8IXS0 508 aa13.27□□□□□ -0.28
PCDHB18P-202ENST00000526308 SIGLEC11Q96RL6 698 aa13.27□□□□□ -0.28
PCDHB18P-202ENST00000526308 DOHHQ9BU89 302 aa13.27□□□□□ -0.28
PCDHB18P-202ENST00000526308 BEX2Q9BXY8 128 aa13.27□□□□□ -0.28
PCDHB18P-202ENST00000526308 GABARAPL3Q9BY60 117 aa13.27□□□□□ -0.28
PCDHB18P-202ENST00000526308 GNG14A0A1W2PPG7 69 aa13.27□□□□□ -0.29
PCDHB18P-202ENST00000526308 BPIP17213 487 aa13.27□□□□□ -0.29
PCDHB18P-202ENST00000526308 EPORP19235 508 aa13.27□□□□□ -0.29
PCDHB18P-202ENST00000526308 TNFSF8P32971 234 aa13.27□□□□□ -0.29
PCDHB18P-202ENST00000526308 HTR3AP46098 478 aa13.27□□□□□ -0.29
PCDHB18P-202ENST00000526308 PRIM2P49643 509 aa13.27□□□□□ -0.29
PCDHB18P-202ENST00000526308 KCNJ10P78508 379 aa13.27□□□□□ -0.29
PCDHB18P-202ENST00000526308 RUNX1T1Q06455 604 aa13.27□□□□□ -0.29
PCDHB18P-202ENST00000526308 STARD3Q14849 445 aa13.27□□□□□ -0.29
PCDHB18P-202ENST00000526308 EXOC3L2Q2M3D2 409 aa13.27□□□□□ -0.29
PCDHB18P-202ENST00000526308 TBRG1Q3YBR2 411 aa13.27□□□□□ -0.29
PCDHB18P-202ENST00000526308 CPTPQ5TA50 214 aa13.27□□□□□ -0.29
PCDHB18P-202ENST00000526308 PTCHD4Q6ZW05 846 aa13.27□□□□□ -0.29
PCDHB18P-202ENST00000526308 UBE2J2Q8N2K1 259 aa13.27□□□□□ -0.29
PCDHB18P-202ENST00000526308 C11orf65Q8NCR3 313 aa13.27□□□□□ -0.29
PCDHB18P-202ENST00000526308 OR6F1Q8NGZ6 308 aa13.27□□□□□ -0.29
PCDHB18P-202ENST00000526308 UBTD2Q8WUN7 234 aa13.27□□□□□ -0.29
PCDHB18P-202ENST00000526308 TMCO6Q96DC7 493 aa13.27□□□□□ -0.29
PCDHB18P-202ENST00000526308 TIGARQ9NQ88 270 aa13.27□□□□□ -0.29
PCDHB18P-202ENST00000526308 SNTG1Q9NSN8 517 aa13.27□□□□□ -0.29
PCDHB18P-202ENST00000526308 PAQR5Q9NXK6 330 aaPredicted RBP13.27□□□□□ -0.29
PCDHB18P-202ENST00000526308 PCDHB11Q9Y5F2 797 aa13.27□□□□□ -0.29
PCDHB18P-202ENST00000526308 NOTOA8MTQ0 251 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 H3BM21 787 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 SLITRK5O94991 958 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 CDC42P60953 191 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 MXD1Q05195 221 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 ABRQ12979 859 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 TSTA3Q13630 321 aaPredicted RBP13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 CDH18Q13634 790 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 GANABQ14697 944 aaKnown RBP13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 HKDC1Q2TB90 917 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 XKR6Q5GH73 641 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 CLLU1OSQ5K130 101 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 TRAF7Q6Q0C0 670 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 FAM124AQ86V42 546 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 TAGAPQ8N103 731 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 NAGSQ8N159 534 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 VANGL1Q8TAA9 524 aaPredicted RBP13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 C7orf34Q96L11 122 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 PHOX2BQ99453 314 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 POFUT2Q9Y2G5 429 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 Q9Y3F1 56 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 MGAT4DA6NG13 374 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 HOXC11O43248 304 aaPredicted RBP13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 DUSP11O75319 330 aaKnown RBP13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 PSMA3P25788 255 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 TIE1P35590 1138 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 HNF1BP35680 557 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 HECTD3Q5T447 861 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 LRRC66Q68CR7 880 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 NXPE1Q8N323 547 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 UBASH3BQ8TF42 649 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 MED8Q96G25 268 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 VPS35Q96QK1 796 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 IL4I1Q96RQ9 567 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 HTATIP2Q9BUP3 242 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 TRIM39Q9HCM9 518 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 DNAJC11Q9NVH1 559 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 LHX3Q9UBR4 397 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 OR6C75A6NL08 312 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 TBKBP1A7MCY6 615 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 CCRL2O00421 344 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 RGS13O14921 159 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 COCHO43405 550 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 PCDH7O60245 1069 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 ANXA8P13928 327 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 ACPPP15309 386 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 SPAM1P38567 509 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 PIK3CBP42338 1070 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 ADGRF1Q5T601 910 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 TMPRSS11AQ6ZMR5 421 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 TSPAN33Q86UF1 283 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 OR4A15Q8NGL6 344 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 CRELD1Q96HD1 420 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 SPATA17Q96L03 361 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 ASPNQ9BXN1 380 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 RDH14Q9HBH5 336 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 FAM120CQ9NX05 1096 aaKnown RBP13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 NDUFAF4Q9P032 175 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 VPS29Q9UBQ0 182 aa13.26□□□□□ -0.29
PCDHB18P-202ENST00000526308 SLC6A14Q9UN76 642 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms