RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 SLC35G6P0C7Q6 338 aa19.6■□□□□ 0.73
TRIM35-203ENST00000521253 GNAZP19086 355 aa19.6■□□□□ 0.73
TRIM35-203ENST00000521253 NR1D1P20393 614 aa19.6■□□□□ 0.73
TRIM35-203ENST00000521253 VARSP26640 1264 aaKnown RBP19.6■□□□□ 0.73
TRIM35-203ENST00000521253 TYK2P29597 1187 aa19.6■□□□□ 0.73
TRIM35-203ENST00000521253 AVPR1BP47901 424 aa19.6■□□□□ 0.73
TRIM35-203ENST00000521253 HSPA7P48741 367 aa19.6■□□□□ 0.73
TRIM35-203ENST00000521253 RRADP55042 308 aa19.6■□□□□ 0.73
TRIM35-203ENST00000521253 CDC16Q13042 620 aa19.6■□□□□ 0.73
TRIM35-203ENST00000521253 SYT16Q17RD7 645 aa19.6■□□□□ 0.73
TRIM35-203ENST00000521253 FAM153CQ494X1 144 aa19.6■□□□□ 0.73
TRIM35-203ENST00000521253 LACTB2Q53H82 288 aaPredicted RBP19.6■□□□□ 0.73
TRIM35-203ENST00000521253 VWA2Q5GFL6 755 aa19.6■□□□□ 0.73
TRIM35-203ENST00000521253 TCTN3Q6NUS6 607 aa19.6■□□□□ 0.73
TRIM35-203ENST00000521253 TBC1D19Q8N5T2 526 aa19.6■□□□□ 0.73
TRIM35-203ENST00000521253 NACC2Q96BF6 587 aa19.6■□□□□ 0.73
TRIM35-203ENST00000521253 MOCOSQ96EN8 888 aa19.6■□□□□ 0.73
TRIM35-203ENST00000521253 AIF1LQ9BQI0 150 aa19.6■□□□□ 0.73
TRIM35-203ENST00000521253 CNOT10Q9H9A5 744 aaKnown RBP19.6■□□□□ 0.73
TRIM35-203ENST00000521253 NUDT4Q9NZJ9 180 aa19.6■□□□□ 0.73
TRIM35-203ENST00000521253 ZFP69BQ9UJL9 534 aa19.6■□□□□ 0.73
TRIM35-203ENST00000521253 MAP4K5Q9Y4K4 846 aa19.6■□□□□ 0.73
TRIM35-203ENST00000521253 HS3ST3B1Q9Y662 390 aa19.6■□□□□ 0.73
TRIM35-203ENST00000521253 IKBKGQ9Y6K9 419 aa19.6■□□□□ 0.73
TRIM35-203ENST00000521253 POC1B-GALNT4F8VUJ3 575 aa19.59■□□□□ 0.73
TRIM35-203ENST00000521253 STK16O75716 305 aa19.59■□□□□ 0.73
TRIM35-203ENST00000521253 NSA2O95478 260 aaKnown RBP19.59■□□□□ 0.73
TRIM35-203ENST00000521253 S100BP04271 92 aaPredicted RBP19.59■□□□□ 0.73
TRIM35-203ENST00000521253 IL1RNP18510 177 aa19.59■□□□□ 0.73
TRIM35-203ENST00000521253 AHRP35869 848 aa19.59■□□□□ 0.73
TRIM35-203ENST00000521253 MSH2P43246 934 aa19.59■□□□□ 0.73
TRIM35-203ENST00000521253 SERPINB9P50453 376 aa19.59■□□□□ 0.73
TRIM35-203ENST00000521253 MAT1AQ00266 395 aaKnown RBP19.59■□□□□ 0.73
TRIM35-203ENST00000521253 PWP1Q13610 501 aa19.59■□□□□ 0.73
TRIM35-203ENST00000521253 FAM83EQ2M2I3 478 aa19.59■□□□□ 0.73
TRIM35-203ENST00000521253 DCAF10Q5QP82 559 aa19.59■□□□□ 0.73
TRIM35-203ENST00000521253 SLCO4C1Q6ZQN7 724 aa19.59■□□□□ 0.73
TRIM35-203ENST00000521253 TRMT10CQ7L0Y3 403 aaKnown RBP19.59■□□□□ 0.73
TRIM35-203ENST00000521253 PTRH1Q86Y79 214 aaKnown RBP19.59■□□□□ 0.73
TRIM35-203ENST00000521253 ANKRD53Q8N9V6 530 aa19.59■□□□□ 0.73
TRIM35-203ENST00000521253 DCAKDQ8WVC6 231 aa19.59■□□□□ 0.73
TRIM35-203ENST00000521253 FER1L6-AS2Q96M78 137 aa19.59■□□□□ 0.73
TRIM35-203ENST00000521253 CRB3Q9BUF7 120 aa19.59■□□□□ 0.73
TRIM35-203ENST00000521253 SEMA3GQ9NS98 782 aa19.59■□□□□ 0.73
TRIM35-203ENST00000521253 DNAJC11Q9NVH1 559 aa19.59■□□□□ 0.73
TRIM35-203ENST00000521253 ASB1Q9Y576 335 aa19.59■□□□□ 0.73
TRIM35-203ENST00000521253 CCDC88CQ9P219 2028 aa19.59■□□□□ 0.73
TRIM35-203ENST00000521253 SUPT3HB4E1H0 165 aa19.58■□□□□ 0.72
TRIM35-203ENST00000521253 H0YIG0 161 aa19.58■□□□□ 0.72
TRIM35-203ENST00000521253 AGPSO00116 658 aa19.58■□□□□ 0.72
TRIM35-203ENST00000521253 UBXN8O00124 270 aa19.58■□□□□ 0.72
TRIM35-203ENST00000521253 MASP2O00187 686 aa19.58■□□□□ 0.72
TRIM35-203ENST00000521253 SOCS6O14544 535 aa19.58■□□□□ 0.72
TRIM35-203ENST00000521253 SUPT3HO75486 399 aa19.58■□□□□ 0.72
TRIM35-203ENST00000521253 CEACAM4O75871 244 aa19.58■□□□□ 0.72
TRIM35-203ENST00000521253 PDGFAP04085 211 aa19.58■□□□□ 0.72
TRIM35-203ENST00000521253 SERPIND1P05546 499 aa19.58■□□□□ 0.72
TRIM35-203ENST00000521253 ABHD2P08910 425 aa19.58■□□□□ 0.72
TRIM35-203ENST00000521253 C1GALT1C1LP0DN25 315 aa19.58■□□□□ 0.72
TRIM35-203ENST00000521253 MAGEA12P43365 314 aa19.58■□□□□ 0.72
TRIM35-203ENST00000521253 GLRBP48167 497 aa19.58■□□□□ 0.72
TRIM35-203ENST00000521253 RBBP5Q15291 538 aaKnown RBP19.58■□□□□ 0.72
TRIM35-203ENST00000521253 TEX35Q5T0J7 233 aa19.58■□□□□ 0.72
TRIM35-203ENST00000521253 ATG9BQ674R7 924 aa19.58■□□□□ 0.72
TRIM35-203ENST00000521253 ZNF605Q86T29 641 aa19.58■□□□□ 0.72
TRIM35-203ENST00000521253 LAPTM4BQ86VI4 370 aa19.58■□□□□ 0.72
TRIM35-203ENST00000521253 PDSS2Q86YH6 399 aa19.58■□□□□ 0.72
TRIM35-203ENST00000521253 GSPT2Q8IYD1 628 aaKnown RBP19.58■□□□□ 0.72
TRIM35-203ENST00000521253 RHEBL1Q8TAI7 183 aa19.58■□□□□ 0.72
TRIM35-203ENST00000521253 ISL2Q96A47 359 aa19.58■□□□□ 0.72
TRIM35-203ENST00000521253 SLC25A23Q9BV35 468 aa19.58■□□□□ 0.72
TRIM35-203ENST00000521253 CAPS2Q9BXY5 557 aa19.58■□□□□ 0.72
TRIM35-203ENST00000521253 TXLNGYQ9BZA5 131 aa19.58■□□□□ 0.72
TRIM35-203ENST00000521253 TGIF2Q9GZN2 237 aa19.58■□□□□ 0.72
TRIM35-203ENST00000521253 VPS11Q9H270 941 aa19.58■□□□□ 0.72
TRIM35-203ENST00000521253 MKKSQ9NPJ1 570 aaPredicted RBP19.58■□□□□ 0.72
TRIM35-203ENST00000521253 GPRC5BQ9NZH0 403 aa19.58■□□□□ 0.72
TRIM35-203ENST00000521253 ZNF180Q9UJW8 692 aa19.58■□□□□ 0.72
TRIM35-203ENST00000521253 C3orf18Q9UK00 162 aa19.58■□□□□ 0.72
TRIM35-203ENST00000521253 PCDHGA9Q9Y5G4 932 aaKnown RBP19.58■□□□□ 0.72
TRIM35-203ENST00000521253 SLC22A7Q9Y694 548 aa19.58■□□□□ 0.72
TRIM35-203ENST00000521253 MED13Q9UHV7 2174 aa19.57■□□□□ 0.72
TRIM35-203ENST00000521253 EXOC1LA0A1B0GW35 172 aa19.57■□□□□ 0.72
TRIM35-203ENST00000521253 A6NL46 340 aa19.57■□□□□ 0.72
TRIM35-203ENST00000521253 SGK494L7N484 410 aa19.57■□□□□ 0.72
TRIM35-203ENST00000521253 RIPK2O43353 540 aa19.57■□□□□ 0.72
TRIM35-203ENST00000521253 KLHL2O95198 593 aa19.57■□□□□ 0.72
TRIM35-203ENST00000521253 IGHEP01854 428 aa19.57■□□□□ 0.72
TRIM35-203ENST00000521253 SLBPQ14493 270 aaKnown RBP eCLIP19.57■□□□□ 0.72
TRIM35-203ENST00000521253 RBBP7Q16576 425 aa19.57■□□□□ 0.72
TRIM35-203ENST00000521253 KIRREL2Q6UWL6 708 aa19.57■□□□□ 0.72
TRIM35-203ENST00000521253 ASB18Q6ZVZ8 466 aa19.57■□□□□ 0.72
TRIM35-203ENST00000521253 TAOK1Q7L7X3 1001 aa19.57■□□□□ 0.72
TRIM35-203ENST00000521253 ZC3H7AQ8IWR0 971 aaKnown RBP19.57■□□□□ 0.72
TRIM35-203ENST00000521253 SHISA5Q8N114 240 aa19.57■□□□□ 0.72
TRIM35-203ENST00000521253 SNX31Q8N9S9 440 aa19.57■□□□□ 0.72
TRIM35-203ENST00000521253 FDCSPQ8NFU4 85 aa19.57■□□□□ 0.72
TRIM35-203ENST00000521253 NT5CQ8TCD5 201 aa19.57■□□□□ 0.72
TRIM35-203ENST00000521253 GPR78Q96P69 363 aa19.57■□□□□ 0.72
TRIM35-203ENST00000521253 MESP1Q9BRJ9 268 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms